BLASTX nr result

ID: Bupleurum21_contig00013534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013534
         (674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327797.1| predicted protein [Populus trichocarpa] gi|2...    85   1e-14
ref|XP_003519896.1| PREDICTED: U-box domain-containing protein 5...    82   1e-13
ref|XP_004146501.1| PREDICTED: U-box domain-containing protein 5...    80   5e-13
ref|XP_003548884.1| PREDICTED: U-box domain-containing protein 5...    78   2e-12
ref|XP_002266200.2| PREDICTED: U-box domain-containing protein 5...    76   5e-12

>ref|XP_002327797.1| predicted protein [Populus trichocarpa] gi|222836882|gb|EEE75275.1|
           predicted protein [Populus trichocarpa]
          Length = 760

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 57/110 (51%), Positives = 68/110 (61%), Gaps = 2/110 (1%)
 Frame = +1

Query: 1   LLALCSQRDSYCRLVMDEGGIVMDEGVIPSLVNISNNGTDKGKASALELLRLFRGITDND 180
           LL LCSQR  YC+LVMDEG       VIPSLV+IS NGTDKG+ASALELLR  R I + D
Sbjct: 658 LLLLCSQRLQYCQLVMDEG-------VIPSLVDISINGTDKGRASALELLRQLRDI-EYD 709

Query: 181 DMQERPESDNDSLSNPGDNIKEDKPSVKPRGFFKTIGLFS--KSVPKKKR 324
           + QE   SD  +  +     +E K S K  GF K + +FS   SV  KK+
Sbjct: 710 NDQESFCSDLVTDRDADHQTREKKSSPKTSGFLKNLSVFSIRSSVASKKK 759


>ref|XP_003519896.1| PREDICTED: U-box domain-containing protein 5-like [Glycine max]
          Length = 760

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 51/111 (45%), Positives = 68/111 (61%), Gaps = 3/111 (2%)
 Frame = +1

Query: 1   LLALCSQRDSYCRLVMDEGGIVMDEGVIPSLVNISNNGTDKGKASALELLRLFRGITDND 180
           LL+LCSQR  YC+LVM EG       +IPSLVNISN G+D  KA ALELLRL +G ++  
Sbjct: 658 LLSLCSQRVEYCQLVMYEG-------IIPSLVNISNKGSDMAKAYALELLRLLKGDSE-F 709

Query: 181 DMQERPESDNDSLSNPGDNIKEDKPSVKPRGFFKTIGLFSKSV---PKKKR 324
           + ++  E + +    P +N  ++K S K     K + LFSKS+   PK KR
Sbjct: 710 EYEDCCEPNLNGSQEPNNNHYQEKKSSKKPSILKKLSLFSKSISVAPKTKR 760


>ref|XP_004146501.1| PREDICTED: U-box domain-containing protein 5-like [Cucumis sativus]
           gi|449499987|ref|XP_004160971.1| PREDICTED: U-box
           domain-containing protein 5-like [Cucumis sativus]
          Length = 715

 Score = 79.7 bits (195), Expect = 5e-13
 Identities = 51/107 (47%), Positives = 64/107 (59%)
 Frame = +1

Query: 1   LLALCSQRDSYCRLVMDEGGIVMDEGVIPSLVNISNNGTDKGKASALELLRLFRGITDND 180
           LL+LCSQR  YC LVM+EG       VIP L  IS  G++KGKA A ELLRL R + DN+
Sbjct: 621 LLSLCSQRVEYCELVMEEG-------VIPPLCTISMKGSEKGKAGATELLRLLRDVQDNE 673

Query: 181 DMQERPESDNDSLSNPGDNIKEDKPSVKPRGFFKTIGLFSKSVPKKK 321
             Q+   S+  S   P  N ++  PS K  GF   +G+FSK  P+KK
Sbjct: 674 P-QDSCVSEPSSSYEPPCNSEQRTPS-KKSGF---LGIFSKRTPRKK 715


>ref|XP_003548884.1| PREDICTED: U-box domain-containing protein 5-like [Glycine max]
          Length = 758

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 51/111 (45%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
 Frame = +1

Query: 1   LLALCSQRDSYCRLVMDEGGIVMDEGVIPSLVNISNNGTDKGKASALELLRLFRGITDND 180
           LL+LCSQR  YC+LV+ EG       +IPSLVNISN G+D  KA ALELLRL +   D  
Sbjct: 658 LLSLCSQRVEYCQLVVSEG-------IIPSLVNISNKGSDMAKAYALELLRLLK--DDEF 708

Query: 181 DMQERPESDNDSLSNPGDNIKEDKPSVKPRGFFKTIGLFSKS---VPKKKR 324
             ++  E +  +   P ++ +E K S KP    K + LFSKS    PK KR
Sbjct: 709 QYEDCCEPNLGASQEPNNHYQEKKSSKKP-SILKKLSLFSKSSSVAPKTKR 758


>ref|XP_002266200.2| PREDICTED: U-box domain-containing protein 5 [Vitis vinifera]
          Length = 902

 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 50/111 (45%), Positives = 64/111 (57%), Gaps = 3/111 (2%)
 Frame = +1

Query: 1    LLALCSQRDSYCRLVMDEGGIVMDEGVIPSLVNISNNGTDKGKASALELLRLFRGITDND 180
            LL LC+QR  YC+LVM+EG       V  SL +IS NG D GK  A ELLRL R I D+ 
Sbjct: 798  LLFLCAQRVQYCQLVMEEGA-----DVFTSLASISLNGNDNGKVKANELLRLLRDI-DHS 851

Query: 181  DMQERPESDNDSLSNPGDNIKEDKPSVKPRGFFKTIGLFSK---SVPKKKR 324
            D++E P S+     +  + +KE K S K  G F  I +FSK     PK+K+
Sbjct: 852  DVKESPGSNLVVPVDSSNYLKEKKSSSKSSGIFGRIPIFSKRRSGSPKRKK 902


Top