BLASTX nr result

ID: Bupleurum21_contig00013457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013457
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283191.1| PREDICTED: pumilio homolog 1-like [Vitis vin...   196   4e-48
emb|CAN61602.1| hypothetical protein VITISV_024967 [Vitis vinifera]   196   4e-48
ref|XP_002299859.1| predicted protein [Populus trichocarpa] gi|2...   187   1e-45
emb|CBI16097.3| unnamed protein product [Vitis vinifera]              178   8e-43
ref|XP_003547219.1| PREDICTED: pumilio homolog 2-like [Glycine max]   171   1e-40

>ref|XP_002283191.1| PREDICTED: pumilio homolog 1-like [Vitis vinifera]
          Length = 1065

 Score =  196 bits (497), Expect = 4e-48
 Identities = 107/197 (54%), Positives = 130/197 (65%), Gaps = 2/197 (1%)
 Frame = -2

Query: 630 ADIFQDDLGRVTPTSGHPSRTPSRNTLSEHVDTLGIADTDMTQLQKDSASADNVRXXXXX 451
           A+IFQDDLGR TP SGHPSR  SRN   E+ + LG  + ++  L+++  SAD +R     
Sbjct: 204 AEIFQDDLGRTTPVSGHPSRPASRNAFDENAEPLGSVEAELGHLRRELKSADVLRSGASV 263

Query: 450 XXXXXXQHXXXXXXXXXXXXXXXXXSRSTTPDPQHIARAPSPCPTPIGGGRAGTSEKRGI 271
                 Q+                 SRSTTPDPQ IARAPSPC TPIGGGR   SEKRGI
Sbjct: 264 QGSSTVQNIGAPTSYTYASVLGGSLSRSTTPDPQLIARAPSPCLTPIGGGRTAISEKRGI 323

Query: 270 N-SSSFNGAPSNVSEPADLAAALSGMSLS-NGMMDEENHLPSQIEQIVNDDEDYLFNMAG 97
           N SSSFN  P +++E ADL AALSGM LS NG++DEENHLPSQIEQ V + + YLFN+ G
Sbjct: 324 NGSSSFNSVPPSMNESADLVAALSGMDLSTNGVIDEENHLPSQIEQDVENHQSYLFNLQG 383

Query: 96  GQNHMKQQPYLKNSDIG 46
           GQ+++KQ  YLK S+ G
Sbjct: 384 GQSNIKQHSYLKKSESG 400


>emb|CAN61602.1| hypothetical protein VITISV_024967 [Vitis vinifera]
          Length = 1039

 Score =  196 bits (497), Expect = 4e-48
 Identities = 107/197 (54%), Positives = 130/197 (65%), Gaps = 2/197 (1%)
 Frame = -2

Query: 630 ADIFQDDLGRVTPTSGHPSRTPSRNTLSEHVDTLGIADTDMTQLQKDSASADNVRXXXXX 451
           A+IFQDDLGR TP SGHPSR  SRN   E+ + LG  + ++  L+++  SAD +R     
Sbjct: 178 AEIFQDDLGRTTPVSGHPSRPASRNAFDENAEPLGSVEAELGHLRRELKSADVLRSGASV 237

Query: 450 XXXXXXQHXXXXXXXXXXXXXXXXXSRSTTPDPQHIARAPSPCPTPIGGGRAGTSEKRGI 271
                 Q+                 SRSTTPDPQ IARAPSPC TPIGGGR   SEKRGI
Sbjct: 238 QGSSTVQNIGAPTSYTYASVLGGSLSRSTTPDPQLIARAPSPCLTPIGGGRTAISEKRGI 297

Query: 270 N-SSSFNGAPSNVSEPADLAAALSGMSLS-NGMMDEENHLPSQIEQIVNDDEDYLFNMAG 97
           N SSSFN  P +++E ADL AALSGM LS NG++DEENHLPSQIEQ V + + YLFN+ G
Sbjct: 298 NGSSSFNSVPPSMNESADLVAALSGMDLSTNGVIDEENHLPSQIEQDVENHQSYLFNLQG 357

Query: 96  GQNHMKQQPYLKNSDIG 46
           GQ+++KQ  YLK S+ G
Sbjct: 358 GQSNIKQHSYLKKSESG 374


>ref|XP_002299859.1| predicted protein [Populus trichocarpa] gi|222847117|gb|EEE84664.1|
           predicted protein [Populus trichocarpa]
          Length = 1065

 Score =  187 bits (475), Expect = 1e-45
 Identities = 100/197 (50%), Positives = 131/197 (66%), Gaps = 2/197 (1%)
 Frame = -2

Query: 630 ADIFQDDLGRVTPTSGHPSRTPSRNTLSEHVDTLGIADTDMTQLQKDSASADNVRXXXXX 451
           A+IFQDDLGR TP +G PSR  SRN  +E+V+TLG A+ ++  L+++ +SAD +R     
Sbjct: 207 AEIFQDDLGRATPVTGPPSRPASRNAFNENVETLGSAEAELAHLRRELSSADTLRSGANG 266

Query: 450 XXXXXXQHXXXXXXXXXXXXXXXXXSRSTTPDPQHIARAPSPCPTPIGGGRAGTSEKRG- 274
                 Q+                 SRSTTPDPQH+ARAPSPCPTPIG GR  TSEKRG 
Sbjct: 267 QGSSPVQN-IGQPSYSYAAALGASLSRSTTPDPQHVARAPSPCPTPIGQGRVSTSEKRGT 325

Query: 273 INSSSFNGAPSNVSEPADLAAALSGMSL-SNGMMDEENHLPSQIEQIVNDDEDYLFNMAG 97
            +S+SF G  S + EP++L AA SGM+L +NG +DEE+HLPSQ EQ V+  ++YLF + G
Sbjct: 326 ASSNSFIGVSSGIREPSELVAAFSGMNLATNGGVDEESHLPSQAEQDVDSHQNYLFGLQG 385

Query: 96  GQNHMKQQPYLKNSDIG 46
           GQNH+KQ  Y+  S+ G
Sbjct: 386 GQNHLKQNTYINKSESG 402


>emb|CBI16097.3| unnamed protein product [Vitis vinifera]
          Length = 358

 Score =  178 bits (451), Expect = 8e-43
 Identities = 101/197 (51%), Positives = 121/197 (61%), Gaps = 2/197 (1%)
 Frame = -2

Query: 630 ADIFQDDLGRVTPTSGHPSRTPSRNTLSEHVDTLGIADTDMTQLQKDSASADNVRXXXXX 451
           A+IFQDDLGR TP SGHPSR  SRN   E+ + LG   + +  +   ++           
Sbjct: 159 AEIFQDDLGRTTPVSGHPSRPASRNAFDENAEPLGSGSSTVQNIGAPTSYT--------- 209

Query: 450 XXXXXXQHXXXXXXXXXXXXXXXXXSRSTTPDPQHIARAPSPCPTPIGGGRAGTSEKRGI 271
                                    SRSTTPDPQ IARAPSPC TPIGGGR   SEKRGI
Sbjct: 210 ----------------YASVLGGSLSRSTTPDPQLIARAPSPCLTPIGGGRTAISEKRGI 253

Query: 270 N-SSSFNGAPSNVSEPADLAAALSGMSLS-NGMMDEENHLPSQIEQIVNDDEDYLFNMAG 97
           N SSSFN  P +++E ADL AALSGM LS NG++DEENHLPSQIEQ V + + YLFN+ G
Sbjct: 254 NGSSSFNSVPPSMNESADLVAALSGMDLSTNGVIDEENHLPSQIEQDVENHQSYLFNLQG 313

Query: 96  GQNHMKQQPYLKNSDIG 46
           GQ+++KQ  YLK S+ G
Sbjct: 314 GQSNIKQHSYLKKSESG 330


>ref|XP_003547219.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1054

 Score =  171 bits (432), Expect = 1e-40
 Identities = 94/207 (45%), Positives = 126/207 (60%), Gaps = 2/207 (0%)
 Frame = -2

Query: 630 ADIFQDDLGRVTPTSGHPSRTPSRNTLSEHVDTLGIADTDMTQLQKDSASADNVRXXXXX 451
           A+IFQDDLG     +G PSR  SRN   E+ D +   ++++  L++DS + D +R     
Sbjct: 212 AEIFQDDLGLNASVTGFPSRPASRNAFDENGDIISSVESELAHLRRDSLATDTLRSVSNV 271

Query: 450 XXXXXXQHXXXXXXXXXXXXXXXXXSRSTTPDPQHIARAPSPCPTPIGGGRAGTSEKRGI 271
                 Q+                 SRSTTPDPQ +ARAPSPCPTPIGGGR   +EKRGI
Sbjct: 272 PVSSAAQNTGPQASYSYAAALGSSLSRSTTPDPQLVARAPSPCPTPIGGGRVVAAEKRGI 331

Query: 270 NS-SSFNGAPSNVSEPADLAAALSGMSLS-NGMMDEENHLPSQIEQIVNDDEDYLFNMAG 97
           NS  +FNG  S V+EPAD+ AALSGM+LS + ++D ++H PSQ+E  V++ + YLF M G
Sbjct: 332 NSPDAFNGVSSGVNEPADIVAALSGMNLSADDVLDGDSHFPSQVESDVDNHQRYLFGMQG 391

Query: 96  GQNHMKQQPYLKNSDIGRENGYGYGNS 16
           GQ+  KQ  YLK S+ G  +   Y +S
Sbjct: 392 GQDPGKQHAYLKKSESGHLHKSAYSDS 418


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