BLASTX nr result

ID: Bupleurum21_contig00013349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013349
         (677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525299.1| PREDICTED: zinc finger CCCH domain-containin...   234   2e-59
ref|XP_002283114.1| PREDICTED: zinc finger CCCH domain-containin...   226   2e-57
ref|XP_003530556.1| PREDICTED: zinc finger CCCH domain-containin...   226   3e-57
gb|ACU23866.1| unknown [Glycine max]                                  226   3e-57
emb|CAN81808.1| hypothetical protein VITISV_013303 [Vitis vinifera]   223   3e-56

>ref|XP_003525299.1| PREDICTED: zinc finger CCCH domain-containing protein 20-like
           [Glycine max]
          Length = 353

 Score =  234 bits (596), Expect = 2e-59
 Identities = 127/235 (54%), Positives = 147/235 (62%), Gaps = 14/235 (5%)
 Frame = +2

Query: 2   CEFAHGVFECWLHPSRYRTQPCKDGQSCRRRVCFFAHTPDEVRVLSPKGACLSDSYDGSP 181
           CE+AHGVFECWLHP+RYRTQPCKDG SCRRRVCFFAHTPD++RVL  +    +DSYDGSP
Sbjct: 134 CEYAHGVFECWLHPARYRTQPCKDGTSCRRRVCFFAHTPDQLRVLPQQSPRSADSYDGSP 193

Query: 182 RRLCFEGDC--------------SPTESPPMSPMAANXXXXXXXXXXXXEMVASLRQLQL 319
            R   E  C              SP ESPPMSPM  +            EMVASLR LQL
Sbjct: 194 LRHAIESSCAKSHPFVASPGSASSPVESPPMSPMTVS----------VNEMVASLRNLQL 243

Query: 320 NKVKSIPTSWALQMGANHGLGSPGSPLTRGGFSSLPSTPNRTVTRPGSGYMSVWDKMKVD 499
            KVKS+P+SW + MG++ G GSP  P+ R GF SLP+TP +  TR G  Y   WD+   +
Sbjct: 244 GKVKSLPSSWNV-MGSS-GFGSPRGPMIRPGFFSLPTTPTQAPTRGGVNYFDQWDQSCCE 301

Query: 500 XXXXXXXPVMERVESGRGLRAKMFEKLSKENPLGRXXXXXXXXXXXXLGWVSELV 664
                  PVMERVESGR +RA+MFEKLSKEN L              +GWVSELV
Sbjct: 302 -----EEPVMERVESGRSIRARMFEKLSKENHLDGSGSGSSQIGVPDVGWVSELV 351


>ref|XP_002283114.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like
           [Vitis vinifera]
          Length = 388

 Score =  226 bits (577), Expect = 2e-57
 Identities = 126/243 (51%), Positives = 150/243 (61%), Gaps = 21/243 (8%)
 Frame = +2

Query: 2   CEFAHGVFECWLHPSRYRTQPCKDGQSCRRRVCFFAHTPDEVRVL---SPKGACLSDSYD 172
           CEFAHGVFECWLHP+RYRTQPCKDG +CRRRVCFFAHT +++RVL   SP+     +SYD
Sbjct: 158 CEFAHGVFECWLHPARYRTQPCKDGPNCRRRVCFFAHTAEQLRVLPQQSPRTPGSVESYD 217

Query: 173 GSPRRLCFEGDCS------------------PTESPPMSPMAANXXXXXXXXXXXXEMVA 298
           GSP R   E  C+                  P ESPPMSP+ ++            EMVA
Sbjct: 218 GSPLRQALEASCAKTLPFMSSPGSVSPPGSPPPESPPMSPITSS-LSRSLGSNSINEMVA 276

Query: 299 SLRQLQLNKVKSIPTSWALQMGANHGLGSPGSPLTRGGFSSLPSTPNRTVTRPGSGYMSV 478
           SLRQLQL+KVKS P+SW + MG+  G GSP + + R GF SLPSTP R   R G G++ +
Sbjct: 277 SLRQLQLSKVKSAPSSWCVHMGSPGGFGSPRASIIRPGFCSLPSTPTRAPKRHGLGFVDL 336

Query: 479 WDKMKVDXXXXXXXPVMERVESGRGLRAKMFEKLSKENPLGRXXXXXXXXXXXXLGWVSE 658
           +++           P MERVESGR LRAKMFEKLSKEN L R            +GWVSE
Sbjct: 337 FEE----------EPAMERVESGRDLRAKMFEKLSKENSLDR-PDPSASGAGPDVGWVSE 385

Query: 659 LVK 667
           LVK
Sbjct: 386 LVK 388


>ref|XP_003530556.1| PREDICTED: zinc finger CCCH domain-containing protein 20-like
           [Glycine max]
          Length = 355

 Score =  226 bits (576), Expect = 3e-57
 Identities = 124/238 (52%), Positives = 144/238 (60%), Gaps = 17/238 (7%)
 Frame = +2

Query: 2   CEFAHGVFECWLHPSRYRTQPCKDGQSCRRRVCFFAHTPDEVRVLSPKGACLSDSYDGSP 181
           CE+AHGVFECWLHP+RYRTQPCKDG SCRRRVCFFAHTP+++RVL  +    +DSYDGSP
Sbjct: 134 CEYAHGVFECWLHPARYRTQPCKDGTSCRRRVCFFAHTPEQLRVLPQQSPRSADSYDGSP 193

Query: 182 RRLCFEGDCS-----------------PTESPPMSPMAANXXXXXXXXXXXXEMVASLRQ 310
            R   E  C+                 P ESPPMSPM  +            EMVASLR 
Sbjct: 194 LRHAIESSCAKTLAPAPFVSSPGSVSPPLESPPMSPMTVS----------VNEMVASLRN 243

Query: 311 LQLNKVKSIPTSWALQMGANHGLGSPGSPLTRGGFSSLPSTPNRTVTRPGSGYMSVWDKM 490
           LQL KVKS+P+SW + MG + G GSP  P+ R GF SLP+TP +  TR G  Y   WD+ 
Sbjct: 244 LQLGKVKSLPSSWNV-MGPS-GFGSPRGPMIRPGFFSLPTTPTQAPTRGGVNYFDKWDQ- 300

Query: 491 KVDXXXXXXXPVMERVESGRGLRAKMFEKLSKENPLGRXXXXXXXXXXXXLGWVSELV 664
                     PVMERVESGR +RA+MF KLSKEN L              +GWVSELV
Sbjct: 301 -----SCEEEPVMERVESGRNIRARMFAKLSKENHLDGSDSGSGQIGDPDVGWVSELV 353


>gb|ACU23866.1| unknown [Glycine max]
          Length = 355

 Score =  226 bits (576), Expect = 3e-57
 Identities = 124/238 (52%), Positives = 144/238 (60%), Gaps = 17/238 (7%)
 Frame = +2

Query: 2   CEFAHGVFECWLHPSRYRTQPCKDGQSCRRRVCFFAHTPDEVRVLSPKGACLSDSYDGSP 181
           CE+AHGVFECWLHP+RYRTQPCKDG SCRRRVCFFAHTP+++RVL  +    +DSYDGSP
Sbjct: 134 CEYAHGVFECWLHPARYRTQPCKDGTSCRRRVCFFAHTPEQLRVLPQQSPRSADSYDGSP 193

Query: 182 RRLCFEGDCS-----------------PTESPPMSPMAANXXXXXXXXXXXXEMVASLRQ 310
            R   E  C+                 P ESPPMSPM  +            EMVASLR 
Sbjct: 194 LRHAIESSCAKTLAPAPFVSSPGSVSPPLESPPMSPMTVS----------VNEMVASLRN 243

Query: 311 LQLNKVKSIPTSWALQMGANHGLGSPGSPLTRGGFSSLPSTPNRTVTRPGSGYMSVWDKM 490
           LQL KVKS+P+SW + MG + G GSP  P+ R GF SLP+TP +  TR G  Y   WD+ 
Sbjct: 244 LQLGKVKSLPSSWNV-MGPS-GFGSPRGPMIRPGFFSLPTTPTQAPTRGGVNYFDKWDQ- 300

Query: 491 KVDXXXXXXXPVMERVESGRGLRAKMFEKLSKENPLGRXXXXXXXXXXXXLGWVSELV 664
                     PVMERVESGR +RA+MF KLSKEN L              +GWVSELV
Sbjct: 301 -----SCEEEPVMERVESGRNIRARMFAKLSKENHLDGSDFGSGQIGDPDVGWVSELV 353


>emb|CAN81808.1| hypothetical protein VITISV_013303 [Vitis vinifera]
          Length = 460

 Score =  223 bits (568), Expect = 3e-56
 Identities = 124/241 (51%), Positives = 148/241 (61%), Gaps = 21/241 (8%)
 Frame = +2

Query: 2   CEFAHGVFECWLHPSRYRTQPCKDGQSCRRRVCFFAHTPDEVRVL---SPKGACLSDSYD 172
           CEFAHGVFECWLHP+RYRTQPCKDG +CRRRVCFFAHT +++RVL   SP+     +SYD
Sbjct: 198 CEFAHGVFECWLHPARYRTQPCKDGPNCRRRVCFFAHTAEQLRVLPQQSPRTPGSVESYD 257

Query: 173 GSPRRLCFEGDCS------------------PTESPPMSPMAANXXXXXXXXXXXXEMVA 298
           GSP R   E  C+                  P ESPPMSP+ ++            EMVA
Sbjct: 258 GSPLRQALEASCAKTLPFMSSPGSVSPPGSPPPESPPMSPITSS-LSRSLGSNSINEMVA 316

Query: 299 SLRQLQLNKVKSIPTSWALQMGANHGLGSPGSPLTRGGFSSLPSTPNRTVTRPGSGYMSV 478
           SLRQLQL+KVKS P+SW + MG+  G GSP + + R GF SLPSTP R   R G G++ +
Sbjct: 317 SLRQLQLSKVKSAPSSWCVHMGSPGGFGSPRASIIRPGFCSLPSTPTRAPKRHGLGFVDL 376

Query: 479 WDKMKVDXXXXXXXPVMERVESGRGLRAKMFEKLSKENPLGRXXXXXXXXXXXXLGWVSE 658
           +++           P MERVESGR LRAKMFEKLSKEN L R            +GWVSE
Sbjct: 377 FEE----------EPAMERVESGRDLRAKMFEKLSKENSLDR-PDPSASGAGPDVGWVSE 425

Query: 659 L 661
           L
Sbjct: 426 L 426


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