BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013344
         (5336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276633.2| PREDICTED: protein RRP5 homolog [Vitis vinif...  2005   0.0  
emb|CBI29966.3| unnamed protein product [Vitis vinifera]             2000   0.0  
ref|XP_003535096.1| PREDICTED: protein RRP5 homolog [Glycine max]    1837   0.0  
ref|XP_002884876.1| S1 RNA-binding domain-containing protein [Ar...  1768   0.0  
ref|NP_187803.4| RNA binding protein [Arabidopsis thaliana] gi|3...  1744   0.0  

>ref|XP_002276633.2| PREDICTED: protein RRP5 homolog [Vitis vinifera]
          Length = 1879

 Score = 2005 bits (5194), Expect = 0.0
 Identities = 1042/1669 (62%), Positives = 1262/1669 (75%), Gaps = 10/1669 (0%)
 Frame = -3

Query: 5334 HSGKLVQGVVKSIDRNRKVVYLSSDDDLTSKCLTRDIKGISIDLLLPGMMVNAHVKATLE 5155
            ++G+++QGV++SID+  KVVYLSSD D  SKC+T+D+KGISIDLL+PGMMVNA V++T E
Sbjct: 271  NTGQILQGVIRSIDKAHKVVYLSSDPDTISKCVTKDLKGISIDLLIPGMMVNARVQSTFE 330

Query: 5154 NGIMLSFLTYFSGTVDIFHLEKPFPSSNWKEEYSQYKKVNARILFIDPSTRAVGLTLNPN 4975
            NG+MLSFLTYF+GTVDIFHL+  FPSSNWK++Y+Q KKVNARILFIDPSTRAVGLTLNP+
Sbjct: 331  NGVMLSFLTYFTGTVDIFHLQTTFPSSNWKDDYNQNKKVNARILFIDPSTRAVGLTLNPH 390

Query: 4974 LVHNKAPLAVVKAGDIFDDSKVIRIDRGLGLLLEIPSLPVPTPAYVSVSDASDKDIRKLE 4795
            LV+NKAP   VK GDI+D SKVIR+DRGLGLLLE+PS P  TP YV+             
Sbjct: 391  LVNNKAPPCPVKTGDIYDHSKVIRVDRGLGLLLEVPSTPASTPTYVT------------- 437

Query: 4794 KSFKEGSRVRVRVLGFRHLEGLATGVLKTSAFEGSVFTHSDVKPGMVVKAKVTVVDSFGA 4615
              +KEGS VRVR+LGFR+LEGLA G LK SAFEGSVFTHSDVKPGMVVKAKV  VDSFGA
Sbjct: 438  --YKEGSHVRVRILGFRNLEGLAMGTLKASAFEGSVFTHSDVKPGMVVKAKVIAVDSFGA 495

Query: 4614 IVQLASGVKALCPLRHMSELDIAKPRKKFQVGAELIFRVLGCKSKRITVTHKKTLVKSKL 4435
            IVQ  SGVKALCPLRHMSE DI KPRKKF+VGAELIFRVLGCKSKRITVTHKKTL+KSKL
Sbjct: 496  IVQFPSGVKALCPLRHMSEFDIVKPRKKFKVGAELIFRVLGCKSKRITVTHKKTLLKSKL 555

Query: 4434 DILSSYADATEGLITHGWITKIENHGCFVRFYNGVQGFAPRSELGLDRGSEISSIYHVEE 4255
             I+SSY DATEGLITHGWITKIE HGCF+RFYNGVQGFAP SELGL+ G   S +YHV +
Sbjct: 556  GIISSYTDATEGLITHGWITKIEKHGCFIRFYNGVQGFAPSSELGLEPGCNTSLMYHVGQ 615

Query: 4254 VVKCRVTSTLPSSRRINLSFIISPTRMSEDVVKPGRLISGVVERITPNTIIVSIDCNGYT 4075
            VVKCRV  ++P+SRRINL+          D+VK G ++ GVV+R+TP+ IIV++   GY 
Sbjct: 616  VVKCRVKGSVPASRRINLN----------DMVKLGSVVGGVVDRVTPHAIIVNVSAKGYL 665

Query: 4074 KGTLSTEHLADNQGLAALMKSSLKPGYEFDRXXXXXXXXXXXXLTAKNSLINSSDQLPLD 3895
            KGT+STEHLAD+QG AALMKS+LKPGYEFD+            L+AK SLINS+ QLPLD
Sbjct: 666  KGTISTEHLADHQGHAALMKSTLKPGYEFDQLLVLDVEGNNFILSAKYSLINSAQQLPLD 725

Query: 3894 VSQLRPHSVVHGYVCNLIETGCFVRFLGRLTGFAPKSKSTDDWRVDLSGVYYIGQSVRCN 3715
            ++Q+ P+SVVHGY+CN+IETGCFVRFLGRLTGF+P++K  DD R   S  ++IGQSVR N
Sbjct: 726  LTQIHPNSVVHGYICNIIETGCFVRFLGRLTGFSPRNKVMDDQRAVPSEAFFIGQSVRSN 785

Query: 3714 IHEVNKETGRTTLSLKQSMCSSTDASFLQEYFILEEKVANMQLSNSNGSELKWVEEFSIG 3535
            I +VN ETGR TLSLKQS CSSTDASF+QEYF+LEEK+A +QLS+S  SELKW E F+IG
Sbjct: 786  ILDVNSETGRITLSLKQSCCSSTDASFIQEYFLLEEKIAKLQLSDSEHSELKWAEGFNIG 845

Query: 3534 NLIEGEVQETKNIGAVIRFKNYDDVFGFITPYQLGGHSVVTGSIVKAMVLDVAKMERLVD 3355
             +IEG++ + K+ G VI F+ Y+DVFGFIT YQL   +   GS V+A+VLDVAK ERLVD
Sbjct: 846  TVIEGKIHDAKDFGVVISFEKYNDVFGFITHYQL---TAERGSTVQAVVLDVAKTERLVD 902

Query: 3354 LSLKPDIVNRFKEDTTSIQSQKKKRKREAHKDMEVQQTVNAVVEIVKENYLVMSIPEYNF 3175
            LSLKP+ ++R KED+++ Q+ KKKR+REA+K+++  QTVNA+VEIVKENYLV+S+PEYN+
Sbjct: 903  LSLKPEFLDRHKEDSSNSQAGKKKRRREAYKELQPHQTVNAIVEIVKENYLVLSLPEYNY 962

Query: 3174 ALGYASLKDYNTQLLPPKQFLPGQCVNATVVALPSPSTAGRXXXXLNSVSALKETSSSKR 2995
            A+GYAS+ DYNTQ    KQFL GQ V A+V+ALPSPST GR    L SVS   ETSSSKR
Sbjct: 963  AIGYASVSDYNTQKFAQKQFLHGQSVIASVMALPSPSTVGRLLLVLKSVSEATETSSSKR 1022

Query: 2994 AKKRLSYDVGSLVQAEITDIKPLELKLKFGHSLHGRVHITEANDE-IVEDPFKNFKIGQT 2818
            AKK+ SY+VGSLVQAEIT+IKPLEL+LKFG   HGRVHITE  DE ++E+PF NF+IGQT
Sbjct: 1023 AKKKSSYNVGSLVQAEITEIKPLELRLKFGIGFHGRVHITEVCDENVIENPFSNFRIGQT 1082

Query: 2817 LTAKIVSKP-KLETSKKFHNWELSIKPSLL--AADTGSGITTEDFSYVIGQRITGFVYKV 2647
            ++A+IV+K  K E + K H WELSIKP +L  + +  + +   +F    GQR+TG+VYKV
Sbjct: 1083 VSARIVAKANKSENNGKNHQWELSIKPEMLTGSIEVENKLVDAEFRISTGQRVTGYVYKV 1142

Query: 2646 DTEWVWFAISRDVSAQLYVLDSACEPNKLQEFQKRFSLGEALTGYILSINKEKKLLRVVL 2467
            + EW+W  ISR + AQL++LD++CEPN+LQEFQKRF +G+A++GY+LS NKEKKLLR+VL
Sbjct: 1143 ENEWIWLTISRHIKAQLFLLDTSCEPNELQEFQKRFEVGKAVSGYVLSANKEKKLLRMVL 1202

Query: 2466 HPLADVPNRENGVISNSISR------EIITSHLSEGRTXXXXXXXXXXXXXXXLVQIDPH 2305
            H  +      +G + N  ++      E +  H+ +G T               LVQI PH
Sbjct: 1203 HQFSVSNGTLDGKVLNIDNQHCNPPIENLIPHIHKGDTLGGRISKILPGVGGLLVQIGPH 1262

Query: 2304 LYGKVHYTELADDWVSDPLSGYSELQFVKCKVLEISRSVMGTTHVELSVRPGSHALESQK 2125
            LYGKVH+TEL D WVSDPLSGY E QFVKCKVLEI  S  GT HV+LS+    + +    
Sbjct: 1263 LYGKVHFTELKDSWVSDPLSGYHEGQFVKCKVLEIGHSEKGTVHVDLSLWSSLNGM---- 1318

Query: 2124 PAELGHSVYKRVEKLEDIRPNEVIQGYVKNVTPRGCFIMLSRKFDAKILISNLSDEFVEN 1945
                 HS   RVEK++++  + ++QGYVKNVT +GCFI+LSRK DA+IL++NLSD +VE 
Sbjct: 1319 -----HSPNSRVEKIDNLHSDMLVQGYVKNVTSKGCFILLSRKLDARILLANLSDGYVEK 1373

Query: 1944 PERQFPXXXXXXXXXLSVEPLSMRIEVTLRTTSTTKASNYGMADFNSIHVGNIISGKVKR 1765
            PER+FP         LSVEPLS R+EVTL+T+S T      + DF+SI VG+II G +KR
Sbjct: 1374 PEREFPIGKLVSGRVLSVEPLSRRVEVTLKTSSATSVQKSEVNDFSSILVGDIIFGTIKR 1433

Query: 1764 IESYGLFITIDQTNMVGLCHLSQLPEEHIEDLEAKYKAGDKVTAKILKVDEDRRRISLGM 1585
            +ESYGLFITID TNMVGLCH+S+L ++HI ++E KYKAG++V AKILKVDE+R RISLGM
Sbjct: 1434 VESYGLFITIDDTNMVGLCHISELSDDHISNIETKYKAGERVAAKILKVDEERHRISLGM 1493

Query: 1584 KDSDPKDNTDIQPPSNRMSGDVSXXXXXXXXXXXXXXDASDVPPVLCQVESRASVLPKVE 1405
            K+S  K+ T      +                        +  PVL QVE          
Sbjct: 1494 KNSYIKETTQNNGFVDDTQLSTFLENNSREIQNLDVEYEDEEYPVLSQVE---------- 1543

Query: 1404 SRASVLSKVESRASVLPLEVTLDDAENSPVSHADGQRLEEVDNIDIVNQKNXXXXXXXXX 1225
                      SRAS+LPLEV LDD  +S +  A GQ     +  + +++K+         
Sbjct: 1544 ----------SRASILPLEVDLDDVNHSNLDDAVGQNHIYTNETNTIDEKSKRRAKKKAK 1593

Query: 1224 XXXXXXXXXXXXRLIQEDIPRTADEFEKLIRNSPNSSFLWIKYMEFMISLSDVDKARSIA 1045
                        RL+  D+PRTADEFEKL+R SPNSSFLWIKYM  M+SL+D++KARSIA
Sbjct: 1594 EEKEQEIRAAEERLMLNDVPRTADEFEKLVRGSPNSSFLWIKYMALMLSLADIEKARSIA 1653

Query: 1044 ERALRTINIREESEKLNIWVAYFNLENEYGNPPEDAVVKIFQRALQYCDPKKVHLALLGV 865
            ERALRTINIREESEKLNIW+AYFNLENEYGNPPE+AVVK+FQRALQYCDPKKVHLALLG+
Sbjct: 1654 ERALRTINIREESEKLNIWMAYFNLENEYGNPPEEAVVKVFQRALQYCDPKKVHLALLGM 1713

Query: 864  YERTERPEQQKMANELIDKMVKKFKHSCKVWLRRIQILLKQKQDGVQPLVNRALLSLPRH 685
            YERT   EQ K+A+EL++KM KKFKHSCKVWLRR+Q +LKQ QDGVQP++NRALL LPRH
Sbjct: 1714 YERT---EQHKLADELLEKMTKKFKHSCKVWLRRVQNVLKQHQDGVQPVINRALLCLPRH 1770

Query: 684  KHIKFISQAAILEFKGGVPDRGRSMFEGMLKEYPKRTDLWSIYLDQEIRLGDMDVIRSLF 505
            KHIKFISQ AILEFK GVPDRGRSMFEGML+EYPKRTDLWS+YLDQEIRLGD+D+IR+LF
Sbjct: 1771 KHIKFISQTAILEFKSGVPDRGRSMFEGMLREYPKRTDLWSVYLDQEIRLGDIDIIRALF 1830

Query: 504  ERAIXXXXXXXXXXXXXXKYLEYEKSLGDEDRIEYVKRKAMEYVESTIA 358
            ERAI              KYLEYEKS GDE+RIE VKRKAMEY  ST+A
Sbjct: 1831 ERAINLSLEPRKMKFLFKKYLEYEKSQGDEERIESVKRKAMEYANSTLA 1879


>emb|CBI29966.3| unnamed protein product [Vitis vinifera]
          Length = 1862

 Score = 2000 bits (5182), Expect = 0.0
 Identities = 1039/1664 (62%), Positives = 1258/1664 (75%), Gaps = 5/1664 (0%)
 Frame = -3

Query: 5334 HSGKLVQGVVKSIDRNRKVVYLSSDDDLTSKCLTRDIKGISIDLLLPGMMVNAHVKATLE 5155
            ++G+++QGV++SID+  KVVYLSSD D  SKC+T+D+KGISIDLL+PGMMVNA V++T E
Sbjct: 270  NTGQILQGVIRSIDKAHKVVYLSSDPDTISKCVTKDLKGISIDLLIPGMMVNARVQSTFE 329

Query: 5154 NGIMLSFLTYFSGTVDIFHLEKPFPSSNWKEEYSQYKKVNARILFIDPSTRAVGLTLNPN 4975
            NG+MLSFLTYF+GTVDIFHL+  FPSSNWK++Y+Q KKVNARILFIDPSTRAVGLTLNP+
Sbjct: 330  NGVMLSFLTYFTGTVDIFHLQTTFPSSNWKDDYNQNKKVNARILFIDPSTRAVGLTLNPH 389

Query: 4974 LVHNKAPLAVVKAGDIFDDSKVIRIDRGLGLLLEIPSLPVPTPAYVSVSDASDKDIRKLE 4795
            LV+NKAP   VK GDI+D SKVIR+DRGLGLLLE+PS P  TP YV++ D +D+++RK+E
Sbjct: 390  LVNNKAPPCPVKTGDIYDHSKVIRVDRGLGLLLEVPSTPASTPTYVTLFDVADEEVRKME 449

Query: 4794 KSFKEGSRVRVRVLGFRHLEGLATGVLKTSAFEGSVFTHSDVKPGMVVKAKVTVVDSFGA 4615
            K +KEGS VRVR+LGFR+LEGLA G LK SAFEGSVFTHSDVKPGMVVKAKV  VDSFGA
Sbjct: 450  KKYKEGSHVRVRILGFRNLEGLAMGTLKASAFEGSVFTHSDVKPGMVVKAKVIAVDSFGA 509

Query: 4614 IVQLASGVKALCPLRHMSELDIAKPRKKFQVGAELIFRVLGCKSKRITVTHKKTLVKSKL 4435
            IVQ  SGVKALCPLRHMSE DI KPRKKF+VGAELIFRVLGCKSKRITVTHKKTL+KSKL
Sbjct: 510  IVQFPSGVKALCPLRHMSEFDIVKPRKKFKVGAELIFRVLGCKSKRITVTHKKTLLKSKL 569

Query: 4434 DILSSYADATEGLITHGWITKIENHGCFVRFYNGVQGFAPRSELGLDRGSEISSIYHVEE 4255
             I+SSY DATEGLITHGWITKIE HGCF+RFYNGVQGFAP SELGL+ G   S +YHV +
Sbjct: 570  GIISSYTDATEGLITHGWITKIEKHGCFIRFYNGVQGFAPSSELGLEPGCNTSLMYHVGQ 629

Query: 4254 VVKCRVTSTLPSSRRINLSFIISPTRMSE-DVVKPGRLISGVVERITPNTIIVSIDCNGY 4078
            VVKCRV  ++P+SRRINLSFII PTR+SE D+VK G ++ GVV+R+TP+ IIV++   GY
Sbjct: 630  VVKCRVKGSVPASRRINLSFIIKPTRISEDDMVKLGSVVGGVVDRVTPHAIIVNVSAKGY 689

Query: 4077 TKGTLSTEHLADNQGLAALMKSSLKPGYEFDRXXXXXXXXXXXXLTAKNSLINSSDQLPL 3898
             KGT+STEHLAD+QG AALMKS+LKPGYEFD+            L+AK SLINS+ QLPL
Sbjct: 690  LKGTISTEHLADHQGHAALMKSTLKPGYEFDQLLVLDVEGNNFILSAKYSLINSAQQLPL 749

Query: 3897 DVSQLRPHSVVHGYVCNLIETGCFVRFLGRLTGFAPKSKSTDDWRVDLSGVYYIGQSVRC 3718
            D++Q+ P+SVVHGY+CN+IETGCFVRFLGRLTGF+P++K  DD R   S  ++IGQSVR 
Sbjct: 750  DLTQIHPNSVVHGYICNIIETGCFVRFLGRLTGFSPRNKVMDDQRAVPSEAFFIGQSVRS 809

Query: 3717 NIHEVNKETGRTTLSLKQSMCSSTDASFLQEYFILEEKVANMQLSNSNGSELKWVEEFSI 3538
            NI +VN ETGR TLSLKQS CSSTDASF+QEYF+LEEK+A +QLS+S  SELKW E F+I
Sbjct: 810  NILDVNSETGRITLSLKQSCCSSTDASFIQEYFLLEEKIAKLQLSDSEHSELKWAEGFNI 869

Query: 3537 GNLIEGEVQETKNIGAVIRFKNYDDVFGFITPYQLGGHSVVTGSIVKAMVLDVAKMERLV 3358
            G +IEG++ + K+ G VI F+ Y+DVFGFIT YQL   +   GS V+A+VLDVAK ERLV
Sbjct: 870  GTVIEGKIHDAKDFGVVISFEKYNDVFGFITHYQL---TAERGSTVQAVVLDVAKTERLV 926

Query: 3357 DLSLKPDIVNRFKEDTTSIQSQKKKRKREAHKDMEVQQTVNAVVEIVKENYLVMSIPEYN 3178
            DLSLKP+ ++R KED+++ Q+ KKKR+REA+K+++  QTVNA+VEIVKENYL  S     
Sbjct: 927  DLSLKPEFLDRHKEDSSNSQAGKKKRRREAYKELQPHQTVNAIVEIVKENYLASS----- 981

Query: 3177 FALGYASLKDYNTQLLPPKQFLPGQCVNATVVALPSPSTAGRXXXXLNSVSALKETSSSK 2998
                           +  KQFL GQ V A+V+ALPSPST GR    L SVS   ETSSSK
Sbjct: 982  --------------FIARKQFLHGQSVIASVMALPSPSTVGRLLLVLKSVSEATETSSSK 1027

Query: 2997 RAKKRLSYDVGSLVQAEITDIKPLELKLKFGHSLHGRVHITEANDE-IVEDPFKNFKIGQ 2821
            RAKK+ SY+VGSLVQAEIT+IKPLEL+LKFG   HGRVHITE  DE ++E+PF NF+IGQ
Sbjct: 1028 RAKKKSSYNVGSLVQAEITEIKPLELRLKFGIGFHGRVHITEVCDENVIENPFSNFRIGQ 1087

Query: 2820 TLTAKIVSKP-KLETSKKFHNWELSIKPSLL--AADTGSGITTEDFSYVIGQRITGFVYK 2650
            T++A+IV+K  K E + K H WELSIKP +L  + +  + +   +F    GQR+TG+VYK
Sbjct: 1088 TVSARIVAKANKSENNGKNHQWELSIKPEMLTGSIEVENKLVDAEFRISTGQRVTGYVYK 1147

Query: 2649 VDTEWVWFAISRDVSAQLYVLDSACEPNKLQEFQKRFSLGEALTGYILSINKEKKLLRVV 2470
            V+ EW+W  ISR + AQL++LD++CEPN+LQEFQKRF +G+A++GY+LS NKEKKLLR+V
Sbjct: 1148 VENEWIWLTISRHIKAQLFLLDTSCEPNELQEFQKRFEVGKAVSGYVLSANKEKKLLRMV 1207

Query: 2469 LHPLADVPNRENGVISNSISREIITSHLSEGRTXXXXXXXXXXXXXXXLVQIDPHLYGKV 2290
            LH  ++                 +  H+ +G T               LVQI PHLYGKV
Sbjct: 1208 LHQFSN-----------------LIPHIHKGDTLGGRISKILPGVGGLLVQIGPHLYGKV 1250

Query: 2289 HYTELADDWVSDPLSGYSELQFVKCKVLEISRSVMGTTHVELSVRPGSHALESQKPAELG 2110
            H+TEL D WVSDPLSGY E QFVKCKVLEI  S  GT HV+LS+    + +         
Sbjct: 1251 HFTELKDSWVSDPLSGYHEGQFVKCKVLEIGHSEKGTVHVDLSLWSSLNGM--------- 1301

Query: 2109 HSVYKRVEKLEDIRPNEVIQGYVKNVTPRGCFIMLSRKFDAKILISNLSDEFVENPERQF 1930
            HS   RVEK++++  + ++QGYVKNVT +GCFI+LSRK DA+IL++NLSD +VE PER+F
Sbjct: 1302 HSPNSRVEKIDNLHSDMLVQGYVKNVTSKGCFILLSRKLDARILLANLSDGYVEKPEREF 1361

Query: 1929 PXXXXXXXXXLSVEPLSMRIEVTLRTTSTTKASNYGMADFNSIHVGNIISGKVKRIESYG 1750
            P         LSVEPLS R+EVTL+T+S T      + DF+SI VG+II G +KR+ESYG
Sbjct: 1362 PIGKLVSGRVLSVEPLSRRVEVTLKTSSATSVQKSEVNDFSSILVGDIIFGTIKRVESYG 1421

Query: 1749 LFITIDQTNMVGLCHLSQLPEEHIEDLEAKYKAGDKVTAKILKVDEDRRRISLGMKDSDP 1570
            LFITID TNMVGLCH+S+L ++HI ++E KYKAG++V AKILKVDE+R RISLGMK+S  
Sbjct: 1422 LFITIDDTNMVGLCHISELSDDHISNIETKYKAGERVAAKILKVDEERHRISLGMKNSYI 1481

Query: 1569 KDNTDIQPPSNRMSGDVSXXXXXXXXXXXXXXDASDVPPVLCQVESRASVLPKVESRASV 1390
            K+ T      +                        +  PVL QVE               
Sbjct: 1482 KETTQNNGFVDDTQLSTFLENNSREIQNLDVEYEDEEYPVLSQVE--------------- 1526

Query: 1389 LSKVESRASVLPLEVTLDDAENSPVSHADGQRLEEVDNIDIVNQKNXXXXXXXXXXXXXX 1210
                 SRAS+LPLEV LDD  +S +  A GQ     +  + +++K+              
Sbjct: 1527 -----SRASILPLEVDLDDVNHSNLDDAVGQNHIYTNETNTIDEKSKRRAKKKAKEEKEQ 1581

Query: 1209 XXXXXXXRLIQEDIPRTADEFEKLIRNSPNSSFLWIKYMEFMISLSDVDKARSIAERALR 1030
                   RL+  D+PRTADEFEKL+R SPNSSFLWIKYM  M+SL+D++KARSIAERALR
Sbjct: 1582 EIRAAEERLMLNDVPRTADEFEKLVRGSPNSSFLWIKYMALMLSLADIEKARSIAERALR 1641

Query: 1029 TINIREESEKLNIWVAYFNLENEYGNPPEDAVVKIFQRALQYCDPKKVHLALLGVYERTE 850
            TINIREESEKLNIW+AYFNLENEYGNPPE+AVVK+FQRALQYCDPKKVHLALLG+YERT 
Sbjct: 1642 TINIREESEKLNIWMAYFNLENEYGNPPEEAVVKVFQRALQYCDPKKVHLALLGMYERT- 1700

Query: 849  RPEQQKMANELIDKMVKKFKHSCKVWLRRIQILLKQKQDGVQPLVNRALLSLPRHKHIKF 670
              EQ K+A+EL++KM KKFKHSCKVWLRR+Q +LKQ QDGVQP++NRALL LPRHKHIKF
Sbjct: 1701 --EQHKLADELLEKMTKKFKHSCKVWLRRVQNVLKQHQDGVQPVINRALLCLPRHKHIKF 1758

Query: 669  ISQAAILEFKGGVPDRGRSMFEGMLKEYPKRTDLWSIYLDQEIRLGDMDVIRSLFERAIX 490
            ISQ AILEFK GVPDRGRSMFEGML+EYPKRTDLWS+YLDQEIRLGD+D+IR+LFERAI 
Sbjct: 1759 ISQTAILEFKSGVPDRGRSMFEGMLREYPKRTDLWSVYLDQEIRLGDIDIIRALFERAIN 1818

Query: 489  XXXXXXXXXXXXXKYLEYEKSLGDEDRIEYVKRKAMEYVESTIA 358
                         KYLEYEKS GDE+RIE VKRKAMEY  ST+A
Sbjct: 1819 LSLEPRKMKFLFKKYLEYEKSQGDEERIESVKRKAMEYANSTLA 1862


>ref|XP_003535096.1| PREDICTED: protein RRP5 homolog [Glycine max]
          Length = 1885

 Score = 1837 bits (4759), Expect = 0.0
 Identities = 938/1658 (56%), Positives = 1240/1658 (74%), Gaps = 4/1658 (0%)
 Frame = -3

Query: 5328 GKLVQGVVKSIDRNRKVVYLSSDDDLTSKCLTRDIKGISIDLLLPGMMVNAHVKATLENG 5149
            GKL+QG+V+SID+ RKVVYLSSD D  +K +T+D++G+SIDLL+PGM+VNA VK+ LENG
Sbjct: 272  GKLLQGLVRSIDKVRKVVYLSSDPDTITKSVTKDLRGLSIDLLVPGMLVNACVKSILENG 331

Query: 5148 IMLSFLTYFSGTVDIFHLEKPFPSSNWKEEYSQYKKVNARILFIDPSTRAVGLTLNPNLV 4969
            +MLSFLTYF+GTVD+FHL+  +P  NWK++ S+ +KV +RILFIDPS+RAVGLTLNP+LV
Sbjct: 332  VMLSFLTYFTGTVDLFHLQNIYPGKNWKDKCSESQKVVSRILFIDPSSRAVGLTLNPHLV 391

Query: 4968 HNKAPLAVVKAGDIFDDSKVIRIDRGLGLLLEIPSLPVPTPAYVSVSDASDKDIRKLEKS 4789
             N+AP + VK GDI+D+SKV+R+DRGLGLLLE+PS+P PTPA+VS               
Sbjct: 392  QNRAPPSHVKIGDIYDNSKVVRVDRGLGLLLEVPSIPEPTPAFVS--------------- 436

Query: 4788 FKEGSRVRVRVLGFRHLEGLATGVLKTSAFEGSVFTHSDVKPGMVVKAKVTVVDSFGAIV 4609
            +KEG+ VRVR+LG R+LEG+ATGVLK SA E  VFTHSDVKPGMVVKAK+  VDSFGAIV
Sbjct: 437  YKEGNHVRVRILGLRYLEGIATGVLKASALEEEVFTHSDVKPGMVVKAKILSVDSFGAIV 496

Query: 4608 QLASGVKALCPLRHMSELDIAKPRKKFQVGAELIFRVLGCKSKRITVTHKKTLVKSKLDI 4429
            Q+  GVKALCPLRHMSEL+I+KP KKF+VGAEL+FRVLGCKSKR+TVTHKKTLVKSKL I
Sbjct: 497  QIPGGVKALCPLRHMSELEISKPGKKFKVGAELVFRVLGCKSKRVTVTHKKTLVKSKLGI 556

Query: 4428 LSSYADATEGLITHGWITKIENHGCFVRFYNGVQGFAPRSELGLDRGSEISSIYHVEEVV 4249
            +SSYADAT+GLITHGWITKIE HGCFVRFYNGVQGFAPRSELGL+ G++  ++Y+V + V
Sbjct: 557  ISSYADATDGLITHGWITKIEVHGCFVRFYNGVQGFAPRSELGLEPGADPGTVYNVGQAV 616

Query: 4248 KCRVTSTLPSSRRINLSFIISPTRMSEDVVKPGRLISGVVERITPNTIIVSIDCNGYTKG 4069
            KCRV S +P+SRRINL+          D+V  G L+SG V+RIT N ++V ++ +G+++G
Sbjct: 617  KCRVISCIPASRRINLN----------DMVTLGSLVSGAVDRITSNAVVVYVNASGFSRG 666

Query: 4068 TLSTEHLADNQGLAALMKSSLKPGYEFDRXXXXXXXXXXXXLTAKNSLINSSDQLPLDVS 3889
            T+S EHLAD+ G A LM S LKPGY FD+            L+AK+SLI  + Q+P D++
Sbjct: 667  TISMEHLADHHGQAILMHSVLKPGYNFDQLLVLDVKGNNLILSAKSSLIKHAQQIPADIN 726

Query: 3888 QLRPHSVVHGYVCNLIETGCFVRFLGRLTGFAPKSKSTDDWRVDLSGVYYIGQSVRCNIH 3709
            Q+ P+SVVHGY+CNLIE+GCFVRFLG LTGFAP++K+ DD + ++   YYIGQSVR NI 
Sbjct: 727  QIHPNSVVHGYICNLIESGCFVRFLGHLTGFAPRNKAADDQKSNILEAYYIGQSVRSNIS 786

Query: 3708 EVNKETGRTTLSLKQSMCSSTDASFLQEYFILEEKVANMQLSNSNGSELKWVEEFSIGNL 3529
             V+ ETGR TLSLKQ+ CSSTDASF+Q+YF++++K+A ++   S  S+ KW E F+IG +
Sbjct: 787  NVSSETGRVTLSLKQTACSSTDASFIQDYFLMDDKIARLEYCGSGASDTKWDEGFNIGMV 846

Query: 3528 IEGEVQETKNIGAVIRFKNYDDVFGFITPYQLGGHSVVTGSIVKAMVLDVAKMERLVDLS 3349
             +G+V+  +++G VI F++Y+DVFGFI  YQL G  + +GSIV+A+VLDV K ++LV+L+
Sbjct: 847  AKGKVKAVEDVGLVISFEHYNDVFGFIANYQLAGTILESGSIVEALVLDVGKADKLVELT 906

Query: 3348 LKPDIVNRFKEDTTSIQSQKKKRKREAHKDMEVQQTVNAVVEIVKENYLVMSIPEYNFAL 3169
            LKP+ +NR KE + S ++ KKKR+REA KD+ + QTVNAVVEIVKENYLV+SIPE ++ +
Sbjct: 907  LKPEFINRSKESSIS-RTNKKKRRREASKDLVLHQTVNAVVEIVKENYLVLSIPENDYTI 965

Query: 3168 GYASLKDYNTQLLPPKQFLPGQCVNATVVALPSPSTAGRXXXXLNSVSALKETSSSKRAK 2989
            GYAS+ DYN Q  P KQ+  GQ V ATV+ALPSP T+GR    ++ V+  + +SSSKR K
Sbjct: 966  GYASVSDYNAQRFPHKQYQNGQSVVATVMALPSPETSGRLLLLVDVVN--ETSSSSKRTK 1023

Query: 2988 KRLSYDVGSLVQAEITDIKPLELKLKFGHSLHGRVHITEA-NDEIVEDPFKNFKIGQTLT 2812
            K+ SY VG+LV+AEITDIK LELKLKFG  L+GR+HITE     ++E+PF ++K+GQT+T
Sbjct: 1024 KKSSYKVGTLVEAEITDIKTLELKLKFGFGLYGRIHITEVYYGNVLENPFSSYKVGQTVT 1083

Query: 2811 AKIVSKP-KLETSKKFHNWELSIKPSLLAADTGSGITTEDFSYVIGQRITGFVYKVDTEW 2635
            A+IV+KP + + ++K   WELS++P ++   +     +E+  + IGQ + G+VYKV++EW
Sbjct: 1084 ARIVAKPNESDGNRKGSQWELSVRPEMVTGSSDIDDVSENLEFKIGQCVAGYVYKVESEW 1143

Query: 2634 VWFAISRDVSAQLYVLDSACEPNKLQEFQKRFSLGEALTGYILSINKEKKLLRVVLHPLA 2455
            VW  ISR+V AQLY+LDSA EP++L++FQ R+ +G+ ++G+ILS+N EKKLLR+V+ P +
Sbjct: 1144 VWLTISRNVRAQLYILDSATEPSELEDFQNRYHVGQPVSGHILSVNMEKKLLRLVVRPFS 1203

Query: 2454 DVP-NRENGVISNSISREIITSHLSEGRTXXXXXXXXXXXXXXXLVQIDPHLYGKVHYTE 2278
             +        ++N + ++ +T+++ EG                 LVQ+ P  YGKVH+TE
Sbjct: 1204 TLSCGTSEEPLTNVVDKD-LTAYVHEGDILGGRVSKILPGVGGLLVQVGPRTYGKVHFTE 1262

Query: 2277 LADDWVSDPLSGYSELQFVKCKVLEISRSVMGTTHVELSVRPGSHALESQKPAELGHSVY 2098
            LAD WV DPLSGY E QFVKC VLE+S +V GT HV+LS+   S+   SQ  A   +S  
Sbjct: 1263 LADTWVPDPLSGYHEEQFVKCIVLEVSHTVKGTIHVDLSL-GSSNVKLSQDSAVNANS-- 1319

Query: 2097 KRVEKLEDIRPNEVIQGYVKNVTPRGCFIMLSRKFDAKILISNLSDEFVENPERQFPXXX 1918
            K VEK+ED+ P+ +++GY+KNVT +GCFIMLSRK DAKIL+SNLS+++V+ PE++FP   
Sbjct: 1320 KCVEKIEDLHPDMIVKGYIKNVTSKGCFIMLSRKIDAKILLSNLSEQYVQEPEKEFPVGK 1379

Query: 1917 XXXXXXLSVEPLSMRIEVTLRTTSTTKASNYGMADFNSIHVGNIISGKVKRIESYGLFIT 1738
                   SVEPLS R+EVTL+ ++        + D +  HVG+++SG++KR+ES+GLFI 
Sbjct: 1380 LVIGRVTSVEPLSNRVEVTLKMSTAPNIPKSEIIDLSKFHVGDVVSGRIKRVESFGLFIA 1439

Query: 1737 IDQTNMVGLCHLSQLPEEHIEDLEAKYKAGDKVTAKILKVDEDRRRISLGMKDSDPKDNT 1558
            ID TNMVGLCH+S++ +  IE++EA Y+AG++V A+ILKVDE+R RISLGMK+S  +  T
Sbjct: 1440 IDNTNMVGLCHISEISDNRIENIEANYRAGERVKARILKVDEERHRISLGMKNSYMRGET 1499

Query: 1557 DIQPPSNRMSGD-VSXXXXXXXXXXXXXXDASDVPPVLCQVESRASVLPKVESRASVLSK 1381
             +Q PS   S + +                 S++      VE   +  P       +LS+
Sbjct: 1500 VLQIPSKEESDEPIVDGMKSITSMNSSLFGTSNI-----DVEDEINQFP-------ILSQ 1547

Query: 1380 VESRASVLPLEVTLDDAENSPVSHADGQRLEEVDNIDIVNQKNXXXXXXXXXXXXXXXXX 1201
             + RA + PL+V LDD +    ++A+ Q  E  +  DIVN+K+                 
Sbjct: 1548 AQERADIPPLDVALDDFDQFDANNANSQSEEHANEEDIVNEKHKRREKKKAKEEREKQIR 1607

Query: 1200 XXXXRLIQEDIPRTADEFEKLIRNSPNSSFLWIKYMEFMISLSDVDKARSIAERALRTIN 1021
                RL+++D+PRTADEFE+LIR+SPNSSF WIKYM+FM+S++DV+KARSIAERALRTIN
Sbjct: 1608 AAEERLLEDDVPRTADEFERLIRSSPNSSFTWIKYMDFMVSMADVEKARSIAERALRTIN 1667

Query: 1020 IREESEKLNIWVAYFNLENEYGNPPEDAVVKIFQRALQYCDPKKVHLALLGVYERTERPE 841
            IREE+EKLNIW AYFNLEN+YGNP E+AV+K+FQRALQY DPKKV+LALLG+YERT   E
Sbjct: 1668 IREENEKLNIWKAYFNLENKYGNPREEAVMKVFQRALQYNDPKKVYLALLGMYERT---E 1724

Query: 840  QQKMANELIDKMVKKFKHSCKVWLRRIQILLKQKQDGVQPLVNRALLSLPRHKHIKFISQ 661
            Q  +A+EL++KM KKFKHSCKVWLRRIQ LLKQ +DG+QP+++RA LSLP+HKHIKF SQ
Sbjct: 1725 QHNLADELLNKMTKKFKHSCKVWLRRIQSLLKQNKDGIQPVIDRASLSLPKHKHIKFFSQ 1784

Query: 660  AAILEFKGGVPDRGRSMFEGMLKEYPKRTDLWSIYLDQEIRLGDMDVIRSLFERAIXXXX 481
             AILEFK G PDRGRSMFE +L+EYPKRTDLWS+YLDQEI+  D D+I +LFERA+    
Sbjct: 1785 TAILEFKVGFPDRGRSMFEKILREYPKRTDLWSVYLDQEIQHKDEDIIHALFERAVSLSL 1844

Query: 480  XXXXXXXXXXKYLEYEKSLGDEDRIEYVKRKAMEYVES 367
                      KYL+YE S GD++RIE VKRKA+EYVES
Sbjct: 1845 PPKKMKFLFKKYLDYEMSQGDQERIESVKRKAIEYVES 1882


>ref|XP_002884876.1| S1 RNA-binding domain-containing protein [Arabidopsis lyrata subsp.
            lyrata] gi|297330716|gb|EFH61135.1| S1 RNA-binding
            domain-containing protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1843

 Score = 1768 bits (4580), Expect = 0.0
 Identities = 920/1674 (54%), Positives = 1208/1674 (72%), Gaps = 16/1674 (0%)
 Frame = -3

Query: 5331 SGKLVQGVVKSIDRNRKVVYLSSDDDLTSKCLTRDIKGISIDLLLPGMMVNAHVKATLEN 5152
            +G+L+QGVV  IDR+RKVV+LSSD D  +KCLT+D+ G+S DLL+PGMMVNA V++ LEN
Sbjct: 209  TGQLIQGVVTKIDRDRKVVHLSSDPDSVAKCLTKDLNGMSFDLLIPGMMVNARVQSVLEN 268

Query: 5151 GIMLSFLTYFSGTVDIFHLEKPFPSSNWKEEYSQYKKVNARILFIDPSTRAVGLTLNPNL 4972
            GI+  FLTYF+GTVD+FHL+ P  + +WK+EY+Q K VNARILFIDPS+RAVGLTLNP+L
Sbjct: 269  GILFDFLTYFNGTVDLFHLKNPLSNKSWKDEYNQNKMVNARILFIDPSSRAVGLTLNPHL 328

Query: 4971 VHNKAPLAVVKAGDIFDDSKVIRIDRGLGLLLEIPSLPVPTPAYVSVSDASDKDIRKLEK 4792
            V NKAP   V +GDIFD++KV+RID+  GLLLE+PS PVP PAY+S              
Sbjct: 329  VCNKAPPLHVFSGDIFDEAKVVRIDKS-GLLLELPSKPVPNPAYIS-------------- 373

Query: 4791 SFKEGSRVRVRVLGFRHLEGLATGVLKTSAFEGSVFTHSDVKPGMVVKAKVTVVDSFGAI 4612
             FKEG+ +RVR+LG + +EGLA G LK SAFEG VFTHSDV+PGMV KAKV  VD+FGAI
Sbjct: 374  -FKEGNHIRVRILGLKQMEGLAIGTLKESAFEGPVFTHSDVRPGMVTKAKVISVDTFGAI 432

Query: 4611 VQLASGVKALCPLRHMSELDIAKPRKKFQVGAELIFRVLGCKSKRITVTHKKTLVKSKLD 4432
            VQ A G+KA+CPLRHMSE ++ KPRKKF+VGAEL+FRVLGCKSKRITVT+KKTLVKSKL 
Sbjct: 433  VQFAGGLKAMCPLRHMSEFEVMKPRKKFKVGAELVFRVLGCKSKRITVTYKKTLVKSKLP 492

Query: 4431 ILSSYADATEGLITHGWITKIENHGCFVRFYNGVQGFAPRSELGLDRGSEISSIYHVEEV 4252
            ILSSY DATEGL+THGWITKIE HGCFVRFYNGVQGF PR ELGL+ GS+  S++HV EV
Sbjct: 493  ILSSYTDATEGLVTHGWITKIEKHGCFVRFYNGVQGFVPRFELGLEPGSDPDSVFHVGEV 552

Query: 4251 VKCRVTSTLPSSRRINLSFIISPTRMSEDVVKPGRLISGVVERITPNTIIVSIDCNGYTK 4072
            VKCRVTS +  SRRI L+          D +K G ++SG+V+ IT   +IV +   G  K
Sbjct: 553  VKCRVTSAVHGSRRITLN----------DSIKLGSIVSGIVDSITSQAVIVRVKSKGVLK 602

Query: 4071 GTLSTEHLADNQGLAALMKSSLKPGYEFDRXXXXXXXXXXXXLTAKNSLINSSDQLPLDV 3892
            GT+STEHLAD+   A LM S L+PGYE D+            L++K SLI  +++LP D 
Sbjct: 603  GTISTEHLADHHDQAKLMMSLLRPGYELDKLLVLDIEGNNLSLSSKYSLIKLAEELPSDF 662

Query: 3891 SQLRPHSVVHGYVCNLIETGCFVRFLGRLTGFAPKSKSTDDWRVDLSGVYYIGQSVRCNI 3712
            +QL+P+SVVHGYVCNLIE GCFVRFLGRLTGFAP+SK+ DD R DLS  +++GQSVR NI
Sbjct: 663  NQLQPNSVVHGYVCNLIENGCFVRFLGRLTGFAPRSKAIDDPRADLSESFFVGQSVRANI 722

Query: 3711 HEVNKETGRTTLSLKQSMCSSTDASFLQEYFILEEKVANMQLSNSNGSELKWVEEFSIGN 3532
             +VN+E  R TLSLKQS C+S DASF+QEYF+++EK++++Q S+   SE  WVE+FSIG+
Sbjct: 723  VDVNQEKSRITLSLKQSSCASVDASFVQEYFLMDEKISDLQSSDITKSEYSWVEKFSIGS 782

Query: 3531 LIEGEVQETKNIGAVIRFKNYDDVFGFITPYQLGGHSVVTGSIVKAMVLDVAKMERLVDL 3352
            LI+G +QE  ++G V+ F N ++V GFI  + +GG ++V GS+V A+VLD+++ ERLVDL
Sbjct: 783  LIKGTLQEQNDLGVVVNFDNINNVLGFIPQHHMGGATMVPGSVVNAVVLDISRAERLVDL 842

Query: 3351 SLKPDIVNRFKEDTTSIQSQKKKRKREAHKDMEVQQTVNAVVEIVKENYLVMSIPEYNFA 3172
            SL+P+++N   ++ ++ Q  KKKRKR   K++EV Q V+AVVEIVKE +LV+SIPE+ + 
Sbjct: 843  SLRPELINNLTKEVSNSQ-LKKKRKRGISKELEVHQRVSAVVEIVKEQHLVLSIPEHGYT 901

Query: 3171 LGYASLKDYNTQLLPPKQFLPGQCVNATVVALPSPSTAGRXXXXLNSVSALKETSSSKRA 2992
            +GYASL DYNTQ LP KQF  GQ V A+V A+ +P T+GR    L+SVS   ETS SKRA
Sbjct: 902  VGYASLSDYNTQKLPVKQFSTGQSVVASVEAVQNPLTSGRLLLLLDSVSGTSETSRSKRA 961

Query: 2991 KKRLSYDVGSLVQAEITDIKPLELKLKFGHSLHGRVHITEANDEIVED-PFKNFKIGQTL 2815
            KK+ S +VGS+V AEIT+IKP EL++ FG+S  GR+HITE ND    D PF  F++GQ++
Sbjct: 962  KKKSSCEVGSVVHAEITEIKPFELRVNFGNSFRGRIHITEVNDASTSDEPFAKFRVGQSM 1021

Query: 2814 TAKIVSKPKLETSKKFHNWELSIKPSLL--AADTGSGITTEDFSYVIGQRITGFVYKVDT 2641
            +A++VSKP     KK   WELS+KP++L  +++      +E   +V GQ + G+VYKVD 
Sbjct: 1022 SARVVSKPCHTDIKKSQLWELSVKPAMLRDSSELNDIQESEQLEFVAGQCVNGYVYKVDK 1081

Query: 2640 EWVWFAISRDVSAQLYVLDSACEPNKLQEFQKRFSLGEALTGYILSINKEKKLLRVVLHP 2461
            EWVW AISR+V+A++++LD+ACE ++L+EF++ F +G+A++GY+L+ NKEK+ LR+V  P
Sbjct: 1082 EWVWLAISRNVTARIFILDTACEAHELEEFERHFPIGKAVSGYVLTYNKEKRTLRLVQRP 1141

Query: 2460 LADV-------PNRENGVISNSISREIITSHLSEGRTXXXXXXXXXXXXXXXLVQIDPHL 2302
            L D+          +   +  SI  +  T  + EG                  VQI P++
Sbjct: 1142 LLDIHKSIANGGGSKTDKLDISIPGDDGTLFIHEGDILGGRISKILPGVGGLRVQIGPYV 1201

Query: 2301 YGKVHYTELADDWVSDPLSGYSELQFVKCKVLEISRSVMGTTHVELSVRPGSHALES--- 2131
            +G+VH+TE+ D WV +PL G+ E QFVKCKVLEIS S  GT  +ELS+R     + S   
Sbjct: 1202 FGRVHFTEINDLWVPNPLDGFREGQFVKCKVLEISSSSKGTWQIELSLRTSLDGMSSADH 1261

Query: 2130 -QKPAELGHSVYKRVEKLEDIRPNEVIQGYVKNVTPRGCFIMLSRKFDAKILISNLSDEF 1954
              +      +V KR E+ ED+  +  +QGYVKN   +GCFI+LSRK +AK+ +SNL D F
Sbjct: 1262 ISEDLNNNDNVCKRFERFEDLSLDMGVQGYVKNTMSKGCFIILSRKVEAKVKLSNLCDTF 1321

Query: 1953 VENPERQFPXXXXXXXXXLSVEPLSMRIEVTLRTTSTTKASNYGMADFNSIHVGNIISGK 1774
            V+ PE++FP         L+VEPLS RIEVTL+T +          D   +HVG++ISG+
Sbjct: 1322 VKEPEKEFPVGKLVTGRVLNVEPLSKRIEVTLKTVNAGGQPKSESYDMKKLHVGDMISGR 1381

Query: 1773 VKRIESYGLFITIDQTNMVGLCHLSQLPEEHIEDLEAKYKAGDKVTAKILKVDEDRRRIS 1594
            +KR+E YGLFI IDQ  MVGLCH++QL ++ IE+++A+YKAG+ V+AKILK+DE++RRIS
Sbjct: 1382 IKRVEPYGLFIDIDQIGMVGLCHITQLSDDRIENVQARYKAGESVSAKILKLDEEKRRIS 1441

Query: 1593 LGMKDSDPKDNTDI--QPPSNRMSGDVSXXXXXXXXXXXXXXDASDVPPVLCQVESRASV 1420
            LGMK S   +  D+  QPPS   + + S                ++V   +     + + 
Sbjct: 1442 LGMKSSYLMNGDDVKAQPPSEEKADETSMECDPINDPN------TEVLAAVGDFGFQETS 1495

Query: 1419 LPKVESRASVLSKVESRASVLPLEVTLDDAENSPVSHADGQRLEEVDNIDIVNQKNXXXX 1240
              +    + VL++V+SRAS+ PLEV LDD E   +   + Q  E++   D  ++K+    
Sbjct: 1496 GGRHSGASLVLAQVDSRASIPPLEVDLDDIEE--MDFDNNQNQEKLLGAD-KDEKSKRRE 1552

Query: 1239 XXXXXXXXXXXXXXXXXRLIQEDIPRTADEFEKLIRNSPNSSFLWIKYMEFMISLSDVDK 1060
                             RL++   P +ADEFEKL+R+SPNSSF+WIKYM FM+SL+D++K
Sbjct: 1553 KQKDKEEREKKIQAAEGRLLEHHAPESADEFEKLVRSSPNSSFVWIKYMAFMLSLADIEK 1612

Query: 1059 ARSIAERALRTINIREESEKLNIWVAYFNLENEYGNPPEDAVVKIFQRALQYCDPKKVHL 880
            ARSIAERALRTINIREE EKLNIWVAYFNLENE+G+PPE+AV K+F+RA QYCDPKKV+L
Sbjct: 1613 ARSIAERALRTINIREEEEKLNIWVAYFNLENEHGSPPEEAVKKVFERARQYCDPKKVYL 1672

Query: 879  ALLGVYERTERPEQQKMANELIDKMVKKFKHSCKVWLRRIQILLKQKQDGVQPLVNRALL 700
            ALLGVYERT   EQ K+ ++L+D+MVKKFK SCK+WLR+IQ  L+Q ++G+Q +VNRALL
Sbjct: 1673 ALLGVYERT---EQYKLVDKLLDEMVKKFKQSCKIWLRKIQSSLQQNEEGIQSVVNRALL 1729

Query: 699  SLPRHKHIKFISQAAILEFKGGVPDRGRSMFEGMLKEYPKRTDLWSIYLDQEIRLGDMDV 520
             LPRHKHIKFISQ AILEFK GV DRGRS+FEG+L+EYPKRTDLWS+YLDQEIRLG++DV
Sbjct: 1730 CLPRHKHIKFISQTAILEFKCGVADRGRSLFEGVLREYPKRTDLWSVYLDQEIRLGEVDV 1789

Query: 519  IRSLFERAIXXXXXXXXXXXXXXKYLEYEKSLGDEDRIEYVKRKAMEYVESTIA 358
            IRSLFERAI              K+LEYE+S+G+E+R EYVK++A+EY +ST+A
Sbjct: 1790 IRSLFERAISLSLPPKKMKFLFKKFLEYERSVGEEERAEYVKQRALEYAKSTLA 1843


>ref|NP_187803.4| RNA binding protein [Arabidopsis thaliana]
            gi|332641610|gb|AEE75131.1| RNA binding protein
            [Arabidopsis thaliana]
          Length = 1896

 Score = 1744 bits (4518), Expect = 0.0
 Identities = 909/1685 (53%), Positives = 1202/1685 (71%), Gaps = 27/1685 (1%)
 Frame = -3

Query: 5331 SGKLVQGVVKSIDRNRKVVYLSSDDDLTSKCLTRDIKGISIDLLLPGMMVNAHVKATLEN 5152
            +G+L+QGVV  IDR+RK+V+LSSD D  +KCLT+D+ G+S DLL+PGMMVNA V++ LEN
Sbjct: 268  TGQLIQGVVTKIDRDRKIVHLSSDPDSVAKCLTKDLSGMSFDLLIPGMMVNARVQSVLEN 327

Query: 5151 GIMLSFLTYFSGTVDIFHLEKPFPSSNWKEEYSQYKKVNARILFIDPSTRAVGLTLNPNL 4972
            GI+  FLTYF+GTVD+FHL+ P  + +WK+EY+Q K VNARILFIDPS+RAVGLTL+P++
Sbjct: 328  GILFDFLTYFNGTVDLFHLKNPLSNKSWKDEYNQNKTVNARILFIDPSSRAVGLTLSPHV 387

Query: 4971 VHNKAPLAVVKAGDIFDDSKVIRIDRGLGLLLEIPSLPVPTPAYVSVSDASDKDIRKLEK 4792
            V NKAP   V +GDIFD++KV+RID+  GLLLE+PS P PTPAYVS              
Sbjct: 388  VCNKAPPLHVFSGDIFDEAKVVRIDKS-GLLLELPSKPTPTPAYVS-------------- 432

Query: 4791 SFKEGSRVRVRVLGFRHLEGLATGVLKTSAFEGSVFTHSDVKPGMVVKAKVTVVDSFGAI 4612
             FKEG+ +RVRVLG + +EGLA G LK SAFEG VFTHSDVKPGMV KAKV  VD+FGAI
Sbjct: 433  -FKEGNHIRVRVLGLKQMEGLAVGTLKESAFEGPVFTHSDVKPGMVTKAKVISVDTFGAI 491

Query: 4611 VQLASGVKALCPLRHMSELDIAKPRKKFQVGAELIFRVLGCKSKRITVTHKKTLVKSKLD 4432
            VQ + G+KA+CPLRHMSE ++ KPRKKF+VGAEL+FRVLGCKSKRITVT+KKTLVKSKL 
Sbjct: 492  VQFSGGLKAMCPLRHMSEFEVTKPRKKFKVGAELVFRVLGCKSKRITVTYKKTLVKSKLP 551

Query: 4431 ILSSYADATEGLITHGWITKIENHGCFVRFYNGVQGFAPRSELGLDRGSEISSIYHVEEV 4252
            ILSSY DATEGL+THGWITKIE HGCFVRFYNGVQGF PR ELGL+ GS+  S++HV EV
Sbjct: 552  ILSSYTDATEGLVTHGWITKIEKHGCFVRFYNGVQGFVPRFELGLEPGSDPDSVFHVGEV 611

Query: 4251 VKCRVTSTLPSSRRINLSFIISPTRMSEDVVKPGRLISGVVERITPNTIIVSIDCNGYTK 4072
            VKCRVTS +  ++RI L+          D +K G ++SG+++ IT   +IV +      K
Sbjct: 612  VKCRVTSAVHGTQRITLN----------DSIKLGSIVSGIIDTITSQAVIVRVKSKSVVK 661

Query: 4071 GTLSTEHLADNQGLAALMKSSLKPGYEFDRXXXXXXXXXXXXLTAKNSLINSSDQLPLDV 3892
            GT+S EHLAD+   A L+ S L+PGYE D+            L++K SLI  +++LP D 
Sbjct: 662  GTISAEHLADHHEQAKLIMSLLRPGYELDKLLVLDIEGNNMALSSKYSLIKLAEELPSDF 721

Query: 3891 SQLRPHSVVHGYVCNLIETGCFVRFLGRLTGFAPKSKSTDDWRVDLSGVYYIGQSVRCNI 3712
            +QL+P+SVVHGYVCNLIE GCFVRFLGRLTGFAP+SK+ DD + D+S  +++GQSVR NI
Sbjct: 722  NQLQPNSVVHGYVCNLIENGCFVRFLGRLTGFAPRSKAIDDPKADVSESFFVGQSVRANI 781

Query: 3711 HEVNKETGRTTLSLKQSMCSSTDASFLQEYFILEEKVANMQLSNSNGSELKWVEEFSIGN 3532
             +VN+E  R TLSLKQS C+S DASF+QEYF+++EK++++Q S+   S+  WVE+FSIG+
Sbjct: 782  VDVNQEKSRITLSLKQSSCASVDASFVQEYFLMDEKISDLQSSDITKSDCSWVEKFSIGS 841

Query: 3531 LIEGEVQETKNIGAVIRFKNYDDVFGFITPYQLGGHSVVTGSIVKAMVLDVAKMERLVDL 3352
            LI+G +QE  ++G V+ F N ++V GFI  + +GG ++V GS+V A+VLD+++ ERLVDL
Sbjct: 842  LIKGTIQEQNDLGVVVNFDNINNVLGFIPQHHMGGATLVPGSVVNAVVLDISRAERLVDL 901

Query: 3351 SLKPDIVNRFKEDTTSIQSQKKKRKREAHKDMEVQQTVNAVVEIVKENYLVMSIPEYNFA 3172
            SL+P+++N   ++ ++  S KKKRKR   K++EV Q V+AVVEIVKE +LV+SIPE+ + 
Sbjct: 902  SLRPELLNNLTKEVSN--SSKKKRKRGISKELEVHQRVSAVVEIVKEQHLVLSIPEHGYT 959

Query: 3171 LGYASLKDYNTQLLPPKQFLPGQCVNATVVALPSPSTAGRXXXXLNSVSALKETSSSKRA 2992
            +GYAS+ DYNTQ LP KQF  GQ V A+V A+ +P T+GR    L+SVS   ETS SKRA
Sbjct: 960  IGYASVSDYNTQKLPVKQFSTGQSVVASVKAVQNPLTSGRLLLLLDSVSGTSETSRSKRA 1019

Query: 2991 KKRLSYDVGSLVQAEITDIKPLELKLKFGHSLHGRVHITE--ANDEIVED-PFKNFKIGQ 2821
            KK+ S +VGS+V AEIT+IKP EL++ FG+S  GR+HITE   ND    D PF  F++GQ
Sbjct: 1020 KKKSSCEVGSVVHAEITEIKPFELRVNFGNSFRGRIHITEVLVNDASTSDEPFAKFRVGQ 1079

Query: 2820 TLTAKIVSKPKLETSKKFHNWELSIKPSLL--AADTGSGITTEDFSYVIGQRITGFVYKV 2647
            +++A++V+KP     KK   WELS+KP++L  +++      +E   +  GQ + G+VYKV
Sbjct: 1080 SISARVVAKPCHTDIKKTQLWELSVKPAMLKDSSEFNDTQESEQLEFAAGQCVIGYVYKV 1139

Query: 2646 DTEWVWFAISRDVSAQLYVLDSACEPNKLQEFQKRFSLGEALTGYILSINKEKKLLRVVL 2467
            D EWVW A+SR+V+A++++LD++C+ ++L+EF++RF +G+A++GY+L+ NKEKK LR+V 
Sbjct: 1140 DKEWVWLAVSRNVTARIFILDTSCKAHELEEFERRFPIGKAVSGYVLTYNKEKKTLRLVQ 1199

Query: 2466 HPL-------ADVPNRENGVISNSISREIITSHLSEGRTXXXXXXXXXXXXXXXLVQIDP 2308
             PL       A+    +     +SI  +  T  + EG                  VQ+ P
Sbjct: 1200 RPLLFIHKSIANGGGSKTDKPDSSIPGDDDTLFIHEGDILGGRISKILPGVGGLRVQLGP 1259

Query: 2307 HLYGKVHYTELADDWVSDPLSGYSELQFVKCKVLEISRSVMGTTHVELSVRPGSHALES- 2131
            +++G+VH+TE+ D WV DPL G+ E QFVKCKVLEIS S  GT  +ELS+R     + S 
Sbjct: 1260 YVFGRVHFTEINDSWVPDPLDGFREGQFVKCKVLEISSSSKGTWQIELSLRTSLDGMSSA 1319

Query: 2130 ---QKPAELGHSVYKRVEKLEDIRPNEVIQGYVKNVTPRGCFIMLSRKFDAKILISNLSD 1960
                +  +   +V KR E++ED+ P+  +QGYVKN   +GCFI+LSR  +AK+ +SNL D
Sbjct: 1320 DHLSEDLKNNDNVCKRFERIEDLSPDMGVQGYVKNTMSKGCFIILSRTVEAKVRLSNLCD 1379

Query: 1959 EFVENPERQFPXXXXXXXXXLSVEPLSMRIEVTLRTTSTTKASNYGMADFNSIHVGNIIS 1780
             FV+ PE++FP         L+VEPLS RIEVTL+T +          D   +HVG++IS
Sbjct: 1380 TFVKEPEKEFPVGKLVTGRVLNVEPLSKRIEVTLKTVNAGGRPKSESYDLKKLHVGDMIS 1439

Query: 1779 GKVKRIESYGLFITIDQTNMVGLCHLSQLPEEHIEDLEAKYKAGDKVTAKILKVDEDRRR 1600
            G+++R+E +GLFI IDQT MVGLCH+SQL ++ +E+++A+YKAG+ V AKILK+DE+++R
Sbjct: 1440 GRIRRVEPFGLFIDIDQTGMVGLCHISQLSDDRMENVQARYKAGESVRAKILKLDEEKKR 1499

Query: 1599 ISLGMKDSDPKDNTD--IQPPSNRMSGDVSXXXXXXXXXXXXXXDASDVPPVLCQVESRA 1426
            ISLGMK S   +  D   QP S                       + +  P+    + ++
Sbjct: 1500 ISLGMKSSYLMNGDDDKAQPLSE-------------------DNTSMECDPI---NDPKS 1537

Query: 1425 SVLPKVE---------SRASVLSKVESRASVLPLEVTLDDAENSPVSHADGQRLEEVDNI 1273
             VL  V+           + VL++VESRAS+ PLEV LDD E +    +  Q      N 
Sbjct: 1538 EVLAAVDDFGFQETSGGTSLVLAQVESRASIPPLEVDLDDIEETDFDSSQNQEKLLGANK 1597

Query: 1272 DIVNQKNXXXXXXXXXXXXXXXXXXXXXRLIQEDIPRTADEFEKLIRNSPNSSFLWIKYM 1093
            D   +K+                     RL++   P  ADEFEKL+R+SPNSSF+WIKYM
Sbjct: 1598 D---EKSKRREKQKDKEEREKKIQAAEGRLLEHHAPENADEFEKLVRSSPNSSFVWIKYM 1654

Query: 1092 EFMISLSDVDKARSIAERALRTINIREESEKLNIWVAYFNLENEYGNPPEDAVVKIFQRA 913
             FM+SL+D++KARSIAERALRTINIREE EKLNIWVAYFNLENE+GNPPE++V K+F+RA
Sbjct: 1655 AFMLSLADIEKARSIAERALRTINIREEEEKLNIWVAYFNLENEHGNPPEESVKKVFERA 1714

Query: 912  LQYCDPKKVHLALLGVYERTERPEQQKMANELIDKMVKKFKHSCKVWLRRIQILLKQKQD 733
             QYCDPKKV+LALLGVYERT   EQ K+A++L+D+M+KKFK SCK+WLR+IQ  LKQ ++
Sbjct: 1715 RQYCDPKKVYLALLGVYERT---EQYKLADKLLDEMIKKFKQSCKIWLRKIQSSLKQNEE 1771

Query: 732  GVQPLVNRALLSLPRHKHIKFISQAAILEFKGGVPDRGRSMFEGMLKEYPKRTDLWSIYL 553
             +Q +VNRALL LPRHKHIKFISQ AILEFK GV DRGRS+FEG+L+EYPKRTDLWS+YL
Sbjct: 1772 AIQSVVNRALLCLPRHKHIKFISQTAILEFKCGVADRGRSLFEGVLREYPKRTDLWSVYL 1831

Query: 552  DQEIRLGDMDVIRSLFERAIXXXXXXXXXXXXXXKYLEYEKSLGDEDRIEYVKRKAMEYV 373
            DQEIRLG+ DVIRSLFERAI              K+LEYEKS+GDE+R+EYVK++AMEY 
Sbjct: 1832 DQEIRLGEDDVIRSLFERAISLSLPPKKMKFLFKKFLEYEKSVGDEERVEYVKQRAMEYA 1891

Query: 372  ESTIA 358
             ST+A
Sbjct: 1892 NSTLA 1896