BLASTX nr result

ID: Bupleurum21_contig00013151 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013151
         (726 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272657.2| PREDICTED: serine/arginine-rich splicing fac...   172   8e-41
ref|XP_003544651.1| PREDICTED: serine/arginine-rich splicing fac...   167   2e-39
ref|NP_001241113.1| uncharacterized protein LOC100790689 [Glycin...   167   2e-39
ref|XP_002330789.1| predicted protein [Populus trichocarpa] gi|2...   167   2e-39
ref|XP_004136307.1| PREDICTED: serine/arginine-rich splicing fac...   164   2e-38

>ref|XP_002272657.2| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
           [Vitis vinifera] gi|296083786|emb|CBI24003.3| unnamed
           protein product [Vitis vinifera]
          Length = 181

 Score =  172 bits (435), Expect = 8e-41
 Identities = 84/110 (76%), Positives = 87/110 (79%)
 Frame = +3

Query: 105 MSRVYVGNLDPRVTERELEDEFRVYGVIRSVWVARRPPGYAFIDFDDRRDAQDAIREIDG 284
           MSRVYVGNLDPRVTERELEDEFRV+GVIRSVWVARRPPGYAFIDFDDRRDAQDAIRE+DG
Sbjct: 1   MSRVYVGNLDPRVTERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELDG 60

Query: 285 RNGWRVELSHNXXXXXXXXXXXXXXXXXXXXXXDLKCYECGEAGHFAREC 434
           +NGWRVELSHN                      DLKCYECGE GHFAREC
Sbjct: 61  KNGWRVELSHN---SRGGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 107


>ref|XP_003544651.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Glycine
           max]
          Length = 178

 Score =  167 bits (424), Expect = 2e-39
 Identities = 82/110 (74%), Positives = 86/110 (78%)
 Frame = +3

Query: 105 MSRVYVGNLDPRVTERELEDEFRVYGVIRSVWVARRPPGYAFIDFDDRRDAQDAIREIDG 284
           MSRVYVGNLD RVTER+LEDEFRV+GVIRSVWVARRPPGYAFIDFDDRRDAQDAIRE+DG
Sbjct: 1   MSRVYVGNLDSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELDG 60

Query: 285 RNGWRVELSHNXXXXXXXXXXXXXXXXXXXXXXDLKCYECGEAGHFAREC 434
           +NGWRVELSHN                      DLKCYECGE GHFAREC
Sbjct: 61  KNGWRVELSHN-------SRGGGGGRGGRSGGSDLKCYECGEPGHFAREC 103


>ref|NP_001241113.1| uncharacterized protein LOC100790689 [Glycine max]
           gi|255625755|gb|ACU13222.1| unknown [Glycine max]
           gi|255635722|gb|ACU18210.1| unknown [Glycine max]
          Length = 178

 Score =  167 bits (424), Expect = 2e-39
 Identities = 82/110 (74%), Positives = 86/110 (78%)
 Frame = +3

Query: 105 MSRVYVGNLDPRVTERELEDEFRVYGVIRSVWVARRPPGYAFIDFDDRRDAQDAIREIDG 284
           MSRVYVGNLD RVTER+LEDEFRV+GVIRSVWVARRPPGYAFIDFDDRRDAQDAIRE+DG
Sbjct: 1   MSRVYVGNLDSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELDG 60

Query: 285 RNGWRVELSHNXXXXXXXXXXXXXXXXXXXXXXDLKCYECGEAGHFAREC 434
           +NGWRVELSHN                      DLKCYECGE GHFAREC
Sbjct: 61  KNGWRVELSHN-------SRGGGGGRGGRSGGSDLKCYECGEPGHFAREC 103


>ref|XP_002330789.1| predicted protein [Populus trichocarpa] gi|222872591|gb|EEF09722.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score =  167 bits (424), Expect = 2e-39
 Identities = 79/110 (71%), Positives = 85/110 (77%)
 Frame = +3

Query: 105 MSRVYVGNLDPRVTERELEDEFRVYGVIRSVWVARRPPGYAFIDFDDRRDAQDAIREIDG 284
           MSRVYVGNLDPRV+ER+LEDEFR +GVIRSVWVARRPPGYAFIDFDD+RDAQDAI E+DG
Sbjct: 1   MSRVYVGNLDPRVSERDLEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDAQDAIHELDG 60

Query: 285 RNGWRVELSHNXXXXXXXXXXXXXXXXXXXXXXDLKCYECGEAGHFAREC 434
           +NGWRVELSHN                      DLKCYECGE GHFAREC
Sbjct: 61  KNGWRVELSHNSRGGGGGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 110


>ref|XP_004136307.1| PREDICTED: serine/arginine-rich splicing factor RSZ22-like [Cucumis
           sativus] gi|449515555|ref|XP_004164814.1| PREDICTED:
           serine/arginine-rich splicing factor RSZ22-like [Cucumis
           sativus]
          Length = 192

 Score =  164 bits (415), Expect = 2e-38
 Identities = 80/110 (72%), Positives = 85/110 (77%)
 Frame = +3

Query: 105 MSRVYVGNLDPRVTERELEDEFRVYGVIRSVWVARRPPGYAFIDFDDRRDAQDAIREIDG 284
           MSRVYVGNLDPRV+ERELEDEFRV+GVIRSVWVARRPPGYAFIDFDD RDA+DAI E+DG
Sbjct: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60

Query: 285 RNGWRVELSHNXXXXXXXXXXXXXXXXXXXXXXDLKCYECGEAGHFAREC 434
           +NGWRVELSHN                      DLKCYECGE GHFAREC
Sbjct: 61  KNGWRVELSHN---SRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFAREC 107


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