BLASTX nr result

ID: Bupleurum21_contig00013134 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013134
         (984 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15262.3| unnamed protein product [Vitis vinifera]              442   e-122
ref|XP_002273058.1| PREDICTED: nuclear ribonuclease Z isoform 1 ...   442   e-122
ref|XP_002330087.1| predicted protein [Populus trichocarpa] gi|2...   435   e-120
ref|XP_003555802.1| PREDICTED: nuclear ribonuclease Z-like [Glyc...   426   e-117
ref|XP_002887553.1| hypothetical protein ARALYDRAFT_476606 [Arab...   424   e-116

>emb|CBI15262.3| unnamed protein product [Vitis vinifera]
          Length = 330

 Score =  442 bits (1137), Expect = e-122
 Identities = 215/272 (79%), Positives = 242/272 (88%)
 Frame = -2

Query: 953 IEGYPIEGLSIAGHETCVILPTLNLAFDIGRCPERATSQKFLFISHAHMDHIGGLPMYVA 774
           IEGYP+EGLSI G ETC+ILP+L LAFDIGRCP+RA SQ FLFISH HMDHIGGLPMYVA
Sbjct: 59  IEGYPVEGLSIGGQETCIILPSLKLAFDIGRCPQRAISQDFLFISHGHMDHIGGLPMYVA 118

Query: 773 TRGLHGMEPPTIIVPTVIKENVEKLFDVHRAMDGSELNHTLIGLDVGEDFYLRKDLKVKA 594
           TRGL+ M+PP IIVP  IKENVE LF VHRAMD SEL H LIGL+VGE+FYLRKDLKV+A
Sbjct: 119 TRGLYRMKPPIIIVPKAIKENVEMLFQVHRAMDESELKHNLIGLNVGEEFYLRKDLKVRA 178

Query: 593 FKTYHVIPSQGYIVYSVKQKLKQEYIGLPANEIKNLKSSGVEITYTTTAPEIAFTGDTMS 414
           F+TYHVIPSQGY+VYSVKQKLKQEY+GLP NEIKNLK SGVEITYT T PEIAFTGDTMS
Sbjct: 179 FRTYHVIPSQGYVVYSVKQKLKQEYVGLPGNEIKNLKLSGVEITYTMTTPEIAFTGDTMS 238

Query: 413 DFIIDKTNSDVLKAKILIMESTYVDSSLTVEKARDHGHTHLSEIVNYANMFENKAILLIH 234
           DFI+D TN D L A++LIMEST+VD+++TVE AR++GHTHLSEIV+YA+ F+NKAILLIH
Sbjct: 239 DFILDHTNVDALMARVLIMESTFVDNTVTVEHAREYGHTHLSEIVSYADRFQNKAILLIH 298

Query: 233 FSARYELEVIKDAVSALLPPLAGRVFALTEGF 138
           FSARY  + I++AVSAL PPL GRVFALTEGF
Sbjct: 299 FSARYTTDEIQEAVSALPPPLGGRVFALTEGF 330


>ref|XP_002273058.1| PREDICTED: nuclear ribonuclease Z isoform 1 [Vitis vinifera]
          Length = 290

 Score =  442 bits (1137), Expect = e-122
 Identities = 215/272 (79%), Positives = 242/272 (88%)
 Frame = -2

Query: 953 IEGYPIEGLSIAGHETCVILPTLNLAFDIGRCPERATSQKFLFISHAHMDHIGGLPMYVA 774
           IEGYP+EGLSI G ETC+ILP+L LAFDIGRCP+RA SQ FLFISH HMDHIGGLPMYVA
Sbjct: 19  IEGYPVEGLSIGGQETCIILPSLKLAFDIGRCPQRAISQDFLFISHGHMDHIGGLPMYVA 78

Query: 773 TRGLHGMEPPTIIVPTVIKENVEKLFDVHRAMDGSELNHTLIGLDVGEDFYLRKDLKVKA 594
           TRGL+ M+PP IIVP  IKENVE LF VHRAMD SEL H LIGL+VGE+FYLRKDLKV+A
Sbjct: 79  TRGLYRMKPPIIIVPKAIKENVEMLFQVHRAMDESELKHNLIGLNVGEEFYLRKDLKVRA 138

Query: 593 FKTYHVIPSQGYIVYSVKQKLKQEYIGLPANEIKNLKSSGVEITYTTTAPEIAFTGDTMS 414
           F+TYHVIPSQGY+VYSVKQKLKQEY+GLP NEIKNLK SGVEITYT T PEIAFTGDTMS
Sbjct: 139 FRTYHVIPSQGYVVYSVKQKLKQEYVGLPGNEIKNLKLSGVEITYTMTTPEIAFTGDTMS 198

Query: 413 DFIIDKTNSDVLKAKILIMESTYVDSSLTVEKARDHGHTHLSEIVNYANMFENKAILLIH 234
           DFI+D TN D L A++LIMEST+VD+++TVE AR++GHTHLSEIV+YA+ F+NKAILLIH
Sbjct: 199 DFILDHTNVDALMARVLIMESTFVDNTVTVEHAREYGHTHLSEIVSYADRFQNKAILLIH 258

Query: 233 FSARYELEVIKDAVSALLPPLAGRVFALTEGF 138
           FSARY  + I++AVSAL PPL GRVFALTEGF
Sbjct: 259 FSARYTTDEIQEAVSALPPPLGGRVFALTEGF 290


>ref|XP_002330087.1| predicted protein [Populus trichocarpa] gi|222871221|gb|EEF08352.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score =  435 bits (1118), Expect = e-120
 Identities = 209/272 (76%), Positives = 243/272 (89%)
 Frame = -2

Query: 953 IEGYPIEGLSIAGHETCVILPTLNLAFDIGRCPERATSQKFLFISHAHMDHIGGLPMYVA 774
           IEGYP+EGLSI GHETC+I  +LN+AFDIGRCP+RA SQ FLFISHAHMDHIGGLPMYVA
Sbjct: 1   IEGYPVEGLSIGGHETCIIFSSLNMAFDIGRCPQRAISQDFLFISHAHMDHIGGLPMYVA 60

Query: 773 TRGLHGMEPPTIIVPTVIKENVEKLFDVHRAMDGSELNHTLIGLDVGEDFYLRKDLKVKA 594
           TRGL+ M+PPT++VPT IKE VE+LF+VHR +DGSEL H LI LDVG++FY+RKDLKV+A
Sbjct: 61  TRGLYRMKPPTVVVPTCIKETVEQLFEVHRRLDGSELKHHLIALDVGQEFYVRKDLKVRA 120

Query: 593 FKTYHVIPSQGYIVYSVKQKLKQEYIGLPANEIKNLKSSGVEITYTTTAPEIAFTGDTMS 414
           FKTYH I SQGY+VYSVKQKLKQEY+GL  NEIK+LKSSGVEIT T T+PEIAFTGDTMS
Sbjct: 121 FKTYHAIQSQGYVVYSVKQKLKQEYLGLSGNEIKSLKSSGVEITNTVTSPEIAFTGDTMS 180

Query: 413 DFIIDKTNSDVLKAKILIMESTYVDSSLTVEKARDHGHTHLSEIVNYANMFENKAILLIH 234
           DFIID+TN DVL+AK+L+MEST+VD ++TVE ARD+GHTHL EIVNYA+ F+NKAILLIH
Sbjct: 181 DFIIDETNIDVLRAKVLVMESTFVDGTVTVEHARDYGHTHLFEIVNYADKFQNKAILLIH 240

Query: 233 FSARYELEVIKDAVSALLPPLAGRVFALTEGF 138
           FSARY ++ I++AV  L  PLAGRVFALTEGF
Sbjct: 241 FSARYTVKEIQEAVQRLPQPLAGRVFALTEGF 272


>ref|XP_003555802.1| PREDICTED: nuclear ribonuclease Z-like [Glycine max]
          Length = 279

 Score =  426 bits (1096), Expect = e-117
 Identities = 206/272 (75%), Positives = 238/272 (87%)
 Frame = -2

Query: 953 IEGYPIEGLSIAGHETCVILPTLNLAFDIGRCPERATSQKFLFISHAHMDHIGGLPMYVA 774
           IEGY + GLSI GHETCVI PTL +AFDIGRCP RA SQ FL I+HAHMDHIGGLPMYVA
Sbjct: 8   IEGYTVGGLSIGGHETCVIFPTLKVAFDIGRCPPRAVSQNFLLITHAHMDHIGGLPMYVA 67

Query: 773 TRGLHGMEPPTIIVPTVIKENVEKLFDVHRAMDGSELNHTLIGLDVGEDFYLRKDLKVKA 594
           TRGL+ M+PPTIIVP  +KE+VEKLF++HR MD SEL H LIGLDVGE+FYLRKDLKVKA
Sbjct: 68  TRGLYRMKPPTIIVPISVKEDVEKLFEIHRKMDQSELKHNLIGLDVGEEFYLRKDLKVKA 127

Query: 593 FKTYHVIPSQGYIVYSVKQKLKQEYIGLPANEIKNLKSSGVEITYTTTAPEIAFTGDTMS 414
           F+TYHVIPSQGYI+YS KQKLK EY+GL  NEIKNLKSSGVEITYT T PEIAFTGDTMS
Sbjct: 128 FRTYHVIPSQGYILYSEKQKLKPEYVGLSGNEIKNLKSSGVEITYTLTEPEIAFTGDTMS 187

Query: 413 DFIIDKTNSDVLKAKILIMESTYVDSSLTVEKARDHGHTHLSEIVNYANMFENKAILLIH 234
           DFI+D+ N+DVL+A+IL++E T+V++S+TVE ARD+GHTHLSEI++YA   +N+AILLIH
Sbjct: 188 DFIVDENNTDVLRARILVLECTFVNNSITVEHARDYGHTHLSEIISYAESLQNRAILLIH 247

Query: 233 FSARYELEVIKDAVSALLPPLAGRVFALTEGF 138
           FSARY +E I+ AVSAL P L+GR FALTEGF
Sbjct: 248 FSARYTVEEIQHAVSALPPSLSGRTFALTEGF 279


>ref|XP_002887553.1| hypothetical protein ARALYDRAFT_476606 [Arabidopsis lyrata subsp.
           lyrata] gi|297333394|gb|EFH63812.1| hypothetical protein
           ARALYDRAFT_476606 [Arabidopsis lyrata subsp. lyrata]
          Length = 280

 Score =  424 bits (1091), Expect = e-116
 Identities = 203/272 (74%), Positives = 237/272 (87%)
 Frame = -2

Query: 953 IEGYPIEGLSIAGHETCVILPTLNLAFDIGRCPERATSQKFLFISHAHMDHIGGLPMYVA 774
           IEGYPIEGLSI GHETC+I P+L +AFDIGRCP RA SQ FLFISH+HMDHIGGLPMYVA
Sbjct: 9   IEGYPIEGLSIGGHETCIIFPSLRIAFDIGRCPHRAISQDFLFISHSHMDHIGGLPMYVA 68

Query: 773 TRGLHGMEPPTIIVPTVIKENVEKLFDVHRAMDGSELNHTLIGLDVGEDFYLRKDLKVKA 594
           TRGL+ M+PPTIIVP  IKE VE LF+VHR +D SEL H L+GLD+GE+F +RKDLKVKA
Sbjct: 69  TRGLYKMKPPTIIVPKSIKETVESLFEVHRKLDSSELKHNLVGLDIGEEFIIRKDLKVKA 128

Query: 593 FKTYHVIPSQGYIVYSVKQKLKQEYIGLPANEIKNLKSSGVEITYTTTAPEIAFTGDTMS 414
           FKTYHVI SQGY+VYS K KLKQEYIGL  NEIKNLK+SGVEIT + T PE+AFTGDT +
Sbjct: 129 FKTYHVIQSQGYVVYSTKHKLKQEYIGLSGNEIKNLKASGVEITDSITTPEVAFTGDTTA 188

Query: 413 DFIIDKTNSDVLKAKILIMESTYVDSSLTVEKARDHGHTHLSEIVNYANMFENKAILLIH 234
           DF++D++N+D LKAK+L+MEST++D S++VE ARD+GH HLSEIVN+A  FENKAILLIH
Sbjct: 189 DFVVDESNADALKAKVLVMESTFLDDSVSVEHARDYGHIHLSEIVNHAAKFENKAILLIH 248

Query: 233 FSARYELEVIKDAVSALLPPLAGRVFALTEGF 138
           FSARY ++ I+DAVSAL PPL GRVFALT+GF
Sbjct: 249 FSARYTVKEIEDAVSALPPPLEGRVFALTQGF 280


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