BLASTX nr result
ID: Bupleurum21_contig00012978
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00012978
(1598 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264968.2| PREDICTED: cell cycle checkpoint protein RAD... 318 e-156
emb|CBI17339.3| unnamed protein product [Vitis vinifera] 318 e-156
ref|XP_002327648.1| predicted protein [Populus trichocarpa] gi|2... 297 e-142
ref|XP_003548835.1| PREDICTED: cell cycle checkpoint protein RAD... 290 e-137
ref|XP_003629272.1| Cell cycle checkpoint protein RAD17 [Medicag... 276 e-134
>ref|XP_002264968.2| PREDICTED: cell cycle checkpoint protein RAD17-like [Vitis vinifera]
Length = 1013
Score = 318 bits (814), Expect(2) = e-156
Identities = 180/303 (59%), Positives = 214/303 (70%), Gaps = 4/303 (1%)
Frame = -2
Query: 1597 VSSSDDEQNDSTFTFSGSKFR-KQRSPLQSSSVPPRINPRRSKKAPRISSSCSRLPLDSN 1421
VSSS+DE+ D +F R K R R NP +KKA RIS S SRL DS+
Sbjct: 9 VSSSEDEEKDGSFNSKRGYSRCKSR----------RKNPSGAKKA-RISGSQSRLCRDSS 57
Query: 1420 PFDEVKLFCEGFDDGFSGFQVVA-EERDKKKELWVDKYKPQSLEELAIHKKKVEEVRSWF 1244
FDE++LFCE F +G +GF+V A R KELWVDKYKP+SLEELA+HKKKVEEV WF
Sbjct: 58 VFDEMRLFCEEFGEGLTGFKVSAGSSRCGGKELWVDKYKPRSLEELAVHKKKVEEVTVWF 117
Query: 1243 EERLRGSKGTNYNHALLITGQTGVGKSVT*NDH*WFIIF*ATVRAIASYFGATLCEWNTP 1064
E+RLR S+ N L+ITGQ GVGKS AT+ AIAS+ GA LCEWNTP
Sbjct: 118 EKRLRTSREEMCN-LLVITGQAGVGKS-------------ATIHAIASHLGARLCEWNTP 163
Query: 1063 TPTIWQEHLHNSGSGIRYTSKLDEFENFVERIRKYGLIPSSDREGSQKTHFLLIDDLPVI 884
PTIWQEHLHN+ SGIRYTSKLDEFE+FVER+RKYGLIP S S+ + LLIDDLPV
Sbjct: 164 IPTIWQEHLHNTNSGIRYTSKLDEFESFVERMRKYGLIPPSFAGESKSSVILLIDDLPVT 223
Query: 883 SGNTSFIRLRSCLHLLVQSVRIPTAIIVTDSGQADSAD--YNMRCWEDLQLSIQSAGACK 710
+GN S+ RLR+CL LL QS +IPTAI++TD G+ADSAD RC E+LQLS+++AGACK
Sbjct: 224 NGNASYRRLRNCLQLLAQSTQIPTAILITDYGKADSADNIATARCLEELQLSLENAGACK 283
Query: 709 VAF 701
+AF
Sbjct: 284 IAF 286
Score = 263 bits (671), Expect(2) = e-156
Identities = 137/212 (64%), Positives = 167/212 (78%), Gaps = 4/212 (1%)
Frame = -1
Query: 626 VAFNPITVNLIKKTLSRICKEEHKAVTVEQIDLIAKASGGDIRHAISSLQYFCLKPNPML 447
+AFNPIT N IKKTLS+IC++E VT +QIDLIA++SGGD+RHAI+SLQYFCLKP+PML
Sbjct: 284 IAFNPITSNSIKKTLSKICRQEQCGVTADQIDLIARSSGGDVRHAITSLQYFCLKPDPML 343
Query: 446 ALSISDGTSTYSEKGLN----LDYEHSLPFGRDETLSLFHALGKFLHNKRVTESSIVSDK 279
+LS S+ TYS++ + LD SLPFGRDETLSLFHALGKFLHNKR +E++I +
Sbjct: 344 SLSFSEPARTYSKEKSDELNPLDDGFSLPFGRDETLSLFHALGKFLHNKRESENAIAPGQ 403
Query: 278 DAFCLREQFMRSSLKMDAPEKVLCQAHGQAKTVTDFLHENVLDFINEEAIDDAWTVSSYL 99
+AF +RE+ R LKMDAPE+VLCQAH QA+ V DFLHENVLDF++EEAIDDA V+SYL
Sbjct: 404 EAFLVRERLTRLPLKMDAPERVLCQAHVQARPVVDFLHENVLDFLSEEAIDDASAVASYL 463
Query: 98 CDADTXXXXXXXXLITNYEAINVVQSAAASVA 3
D+D L T+YEA NV+QSAAASVA
Sbjct: 464 SDSDFLLAAHRGMLATSYEAGNVLQSAAASVA 495
>emb|CBI17339.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 318 bits (814), Expect(2) = e-156
Identities = 180/303 (59%), Positives = 214/303 (70%), Gaps = 4/303 (1%)
Frame = -2
Query: 1597 VSSSDDEQNDSTFTFSGSKFR-KQRSPLQSSSVPPRINPRRSKKAPRISSSCSRLPLDSN 1421
VSSS+DE+ D +F R K R R NP +KKA RIS S SRL DS+
Sbjct: 9 VSSSEDEEKDGSFNSKRGYSRCKSR----------RKNPSGAKKA-RISGSQSRLCRDSS 57
Query: 1420 PFDEVKLFCEGFDDGFSGFQVVA-EERDKKKELWVDKYKPQSLEELAIHKKKVEEVRSWF 1244
FDE++LFCE F +G +GF+V A R KELWVDKYKP+SLEELA+HKKKVEEV WF
Sbjct: 58 VFDEMRLFCEEFGEGLTGFKVSAGSSRCGGKELWVDKYKPRSLEELAVHKKKVEEVTVWF 117
Query: 1243 EERLRGSKGTNYNHALLITGQTGVGKSVT*NDH*WFIIF*ATVRAIASYFGATLCEWNTP 1064
E+RLR S+ N L+ITGQ GVGKS AT+ AIAS+ GA LCEWNTP
Sbjct: 118 EKRLRTSREEMCN-LLVITGQAGVGKS-------------ATIHAIASHLGARLCEWNTP 163
Query: 1063 TPTIWQEHLHNSGSGIRYTSKLDEFENFVERIRKYGLIPSSDREGSQKTHFLLIDDLPVI 884
PTIWQEHLHN+ SGIRYTSKLDEFE+FVER+RKYGLIP S S+ + LLIDDLPV
Sbjct: 164 IPTIWQEHLHNTNSGIRYTSKLDEFESFVERMRKYGLIPPSFAGESKSSVILLIDDLPVT 223
Query: 883 SGNTSFIRLRSCLHLLVQSVRIPTAIIVTDSGQADSAD--YNMRCWEDLQLSIQSAGACK 710
+GN S+ RLR+CL LL QS +IPTAI++TD G+ADSAD RC E+LQLS+++AGACK
Sbjct: 224 NGNASYRRLRNCLQLLAQSTQIPTAILITDYGKADSADNIATARCLEELQLSLENAGACK 283
Query: 709 VAF 701
+AF
Sbjct: 284 IAF 286
Score = 263 bits (671), Expect(2) = e-156
Identities = 137/212 (64%), Positives = 167/212 (78%), Gaps = 4/212 (1%)
Frame = -1
Query: 626 VAFNPITVNLIKKTLSRICKEEHKAVTVEQIDLIAKASGGDIRHAISSLQYFCLKPNPML 447
+AFNPIT N IKKTLS+IC++E VT +QIDLIA++SGGD+RHAI+SLQYFCLKP+PML
Sbjct: 284 IAFNPITSNSIKKTLSKICRQEQCGVTADQIDLIARSSGGDVRHAITSLQYFCLKPDPML 343
Query: 446 ALSISDGTSTYSEKGLN----LDYEHSLPFGRDETLSLFHALGKFLHNKRVTESSIVSDK 279
+LS S+ TYS++ + LD SLPFGRDETLSLFHALGKFLHNKR +E++I +
Sbjct: 344 SLSFSEPARTYSKEKSDELNPLDDGFSLPFGRDETLSLFHALGKFLHNKRESENAIAPGQ 403
Query: 278 DAFCLREQFMRSSLKMDAPEKVLCQAHGQAKTVTDFLHENVLDFINEEAIDDAWTVSSYL 99
+AF +RE+ R LKMDAPE+VLCQAH QA+ V DFLHENVLDF++EEAIDDA V+SYL
Sbjct: 404 EAFLVRERLTRLPLKMDAPERVLCQAHVQARPVVDFLHENVLDFLSEEAIDDASAVASYL 463
Query: 98 CDADTXXXXXXXXLITNYEAINVVQSAAASVA 3
D+D L T+YEA NV+QSAAASVA
Sbjct: 464 SDSDFLLAAHRGMLATSYEAGNVLQSAAASVA 495
>ref|XP_002327648.1| predicted protein [Populus trichocarpa] gi|222836733|gb|EEE75126.1|
predicted protein [Populus trichocarpa]
Length = 613
Score = 297 bits (761), Expect(2) = e-142
Identities = 162/300 (54%), Positives = 207/300 (69%), Gaps = 1/300 (0%)
Frame = -2
Query: 1597 VSSSDDEQNDSTFTFSGSKFRKQRSPLQSSSVPPRINPRRSKKAPRISSSCSRLPLDSNP 1418
+ SSDDE + + + R +S S R NPR+ KK PR+S S SR DS
Sbjct: 11 ILSSDDEDDCD---YKPNSHRSYTKKPKSRSFITRTNPRQPKK-PRVSGSRSRFSRDSPN 66
Query: 1417 FDEVKLFCEGFDDGFSGFQVVAEE-RDKKKELWVDKYKPQSLEELAIHKKKVEEVRSWFE 1241
EV E F++ FSG +V A R KELWVDK+KPQSLEELA+HKKKVEEV+SWFE
Sbjct: 67 LFEVGFPEEDFEELFSGSKVSAGSGRSNVKELWVDKHKPQSLEELAVHKKKVEEVKSWFE 126
Query: 1240 ERLRGSKGTNYNHALLITGQTGVGKSVT*NDH*WFIIF*ATVRAIASYFGATLCEWNTPT 1061
ERL+ +KG N+ ++I G+ GVGKS T ++ IAS+FGA LCEWNTPT
Sbjct: 127 ERLKTTKGNLINNVVVINGKAGVGKSTT-------------IQVIASHFGARLCEWNTPT 173
Query: 1060 PTIWQEHLHNSGSGIRYTSKLDEFENFVERIRKYGLIPSSDREGSQKTHFLLIDDLPVIS 881
PTIWQEH+HN+ +GI+YTSKLDEF NF+E+IRKYGLIPSS E + + LLIDDLP+ +
Sbjct: 174 PTIWQEHVHNTNTGIQYTSKLDEFVNFIEKIRKYGLIPSSSSEDVKPSIILLIDDLPMTN 233
Query: 880 GNTSFIRLRSCLHLLVQSVRIPTAIIVTDSGQADSADYNMRCWEDLQLSIQSAGACKVAF 701
G +F RL+SCL LV+S ++PTAI+V+D +ADSAD+ R E LQLS+++AGACKV+F
Sbjct: 234 GRVAFERLQSCLLHLVRSTQLPTAILVSDYDEADSADHTARRLEQLQLSLENAGACKVSF 293
Score = 237 bits (604), Expect(2) = e-142
Identities = 133/212 (62%), Positives = 159/212 (75%), Gaps = 4/212 (1%)
Frame = -1
Query: 626 VAFNPITVNLIKKTLSRICKEEHKAVTVEQIDLIAKASGGDIRHAISSLQYFCLKPNPML 447
V+FNPIT N IKKTLSRIC++E +VT EQ+DLIAK SGGDIRHAI+SLQ FC+KP+ +L
Sbjct: 291 VSFNPITNNSIKKTLSRICRQEQCSVTDEQLDLIAKGSGGDIRHAITSLQLFCVKPDLVL 350
Query: 446 ALSISDGTSTYSEKGLNLDY---EHSLPFGRDETLSLFHALGKFLHNKRVTE-SSIVSDK 279
S S + Y ++ ++D SL FGRDETLSLFHALGKFLHNKR TE ++ ++
Sbjct: 351 NGSYSTPSYLYGKED-DIDALVSGISLLFGRDETLSLFHALGKFLHNKRETEVANAITPG 409
Query: 278 DAFCLREQFMRSSLKMDAPEKVLCQAHGQAKTVTDFLHENVLDFINEEAIDDAWTVSSYL 99
DAF ++E F R LKMDAPEKVLCQAHGQA+ VTDFLHENVLDFI++EA+DDAW VSSY
Sbjct: 410 DAFLVQENFSRLPLKMDAPEKVLCQAHGQARPVTDFLHENVLDFISDEAMDDAWHVSSYF 469
Query: 98 CDADTXXXXXXXXLITNYEAINVVQSAAASVA 3
D+D L EA NV+QSAAASVA
Sbjct: 470 SDSDLLLSSFRGMLARYNEAENVLQSAAASVA 501
>ref|XP_003548835.1| PREDICTED: cell cycle checkpoint protein RAD17-like [Glycine max]
Length = 651
Score = 290 bits (741), Expect(2) = e-137
Identities = 154/300 (51%), Positives = 205/300 (68%), Gaps = 1/300 (0%)
Frame = -2
Query: 1597 VSSSDDEQNDSTFTFSGSKFRKQRSPLQSSSVPPRINPRRSKKAPRISSSCSRLPLDSNP 1418
+ SS+DE+ D S S + +S S + R K+A R S+S S L +
Sbjct: 58 ILSSEDEEEDGFIVRSLSSSHSYNTKTKSKSKSTSASSRGRKRA-RASASRSHL----SK 112
Query: 1417 FDEVKLFCEGFDDGFSGFQVVA-EERDKKKELWVDKYKPQSLEELAIHKKKVEEVRSWFE 1241
E+ LF + F++ F+G +V A R ++LW+DKYKP SLEELA+HKKKVEEV++WFE
Sbjct: 113 LHEIDLFGDDFNEVFTGSKVSAGTHRHYAEDLWIDKYKPCSLEELAVHKKKVEEVKTWFE 172
Query: 1240 ERLRGSKGTNYNHALLITGQTGVGKSVT*NDH*WFIIF*ATVRAIASYFGATLCEWNTPT 1061
ERL+ SKG N+ L+I+GQ GVGKS A + IAS+ GA +C WNTPT
Sbjct: 173 ERLKPSKGAYCNNVLVISGQAGVGKS-------------AAIHVIASHLGAVVCGWNTPT 219
Query: 1060 PTIWQEHLHNSGSGIRYTSKLDEFENFVERIRKYGLIPSSDREGSQKTHFLLIDDLPVIS 881
P IWQEHL+NSG+G +YTSKLDEFE+FV+R+RKYGL+ +S S+ + LLIDDLP+ +
Sbjct: 220 PVIWQEHLYNSGTGTKYTSKLDEFESFVDRVRKYGLLLTSHTGESKPSVILLIDDLPLTN 279
Query: 880 GNTSFIRLRSCLHLLVQSVRIPTAIIVTDSGQADSADYNMRCWEDLQLSIQSAGACKVAF 701
G ++F RL+ CLH+LV S +IPTAI+ TD G ADSADYN RC E+L+LS++S+GACKVAF
Sbjct: 280 GKSAFRRLKDCLHVLVNSTQIPTAILFTDYGNADSADYNARCLEELKLSLESSGACKVAF 339
Score = 226 bits (575), Expect(2) = e-137
Identities = 123/208 (59%), Positives = 150/208 (72%)
Frame = -1
Query: 626 VAFNPITVNLIKKTLSRICKEEHKAVTVEQIDLIAKASGGDIRHAISSLQYFCLKPNPML 447
VAFNPIT+N +KK L RIC+ EH VT E +DLIAK SGGDIRHAI+SLQ+FCLKP+
Sbjct: 337 VAFNPITLNTMKKILFRICQMEHCDVTAEYVDLIAKTSGGDIRHAITSLQFFCLKPSTCY 396
Query: 446 ALSISDGTSTYSEKGLNLDYEHSLPFGRDETLSLFHALGKFLHNKRVTESSIVSDKDAFC 267
++ + S+K + D +SL FGRDETLSLFHALGKFLHNKR ES + ++ D F
Sbjct: 397 RGALKEE----SDKPVRSDDGYSLHFGRDETLSLFHALGKFLHNKR--ESGVSTEYDGFL 450
Query: 266 LREQFMRSSLKMDAPEKVLCQAHGQAKTVTDFLHENVLDFINEEAIDDAWTVSSYLCDAD 87
++E+ R LKMD PEK+L QAH Q V DFLHENVLDF+N+EAIDDAWT+SSYL DAD
Sbjct: 451 MQERLSRLPLKMDVPEKILYQAHVQPGPVADFLHENVLDFLNDEAIDDAWTLSSYLGDAD 510
Query: 86 TXXXXXXXXLITNYEAINVVQSAAASVA 3
L T EA +V++SAAAS+A
Sbjct: 511 ILLTKLRGMLSTYNEAESVLRSAAASIA 538
>ref|XP_003629272.1| Cell cycle checkpoint protein RAD17 [Medicago truncatula]
gi|355523294|gb|AET03748.1| Cell cycle checkpoint protein
RAD17 [Medicago truncatula]
Length = 604
Score = 276 bits (707), Expect(2) = e-134
Identities = 154/308 (50%), Positives = 201/308 (65%), Gaps = 9/308 (2%)
Frame = -2
Query: 1597 VSSSDDEQNDSTFTFSGSKFRKQRSPLQSSSVPPRINPR------RSKKAPRISSSCSRL 1436
V SSDDE+N K RS L S+S P+ P+ R +K R+SSS RL
Sbjct: 9 VLSSDDEENAP----------KTRS-LSSTSSKPKPKPKSTSTGSRGRKKARVSSSAPRL 57
Query: 1435 PLDSNPFDEVKLFCEGFDDGFSGFQVVAE---ERDKKKELWVDKYKPQSLEELAIHKKKV 1265
+ E+ LF + F+ F+G +V A +R +ELWVDKYKP SLEELA+HKKKV
Sbjct: 58 ----SKLYEINLFDDDFNQVFTGSKVFAAAGTQRSTAEELWVDKYKPHSLEELAVHKKKV 113
Query: 1264 EEVRSWFEERLRGSKGTNYNHALLITGQTGVGKSVT*NDH*WFIIF*ATVRAIASYFGAT 1085
EEV++WFEERL+ SKG N+ L+++GQ G+GKS A + IAS+ GA
Sbjct: 114 EEVKTWFEERLKPSKGVYRNNVLVVSGQAGIGKS-------------AAIHVIASHLGAM 160
Query: 1084 LCEWNTPTPTIWQEHLHNSGSGIRYTSKLDEFENFVERIRKYGLIPSSDREGSQKTHFLL 905
+C WNTPTP IWQEHL+NSG+ +YTSKLDEF +FVERIR +GLIP+S S+ + L
Sbjct: 161 VCGWNTPTPVIWQEHLYNSGTETKYTSKLDEFVSFVERIRTFGLIPTSFTGESKPSIIYL 220
Query: 904 IDDLPVISGNTSFIRLRSCLHLLVQSVRIPTAIIVTDSGQADSADYNMRCWEDLQLSIQS 725
IDDLP++ + RL+ CL+LLV + RIPTAI+VTD G DSADYN R E+L+ S++S
Sbjct: 221 IDDLPMMHSKAALGRLKDCLNLLVHTTRIPTAILVTDYGNTDSADYNARSVEELKTSLES 280
Query: 724 AGACKVAF 701
+GACK+AF
Sbjct: 281 SGACKIAF 288
Score = 229 bits (584), Expect(2) = e-134
Identities = 122/212 (57%), Positives = 151/212 (71%), Gaps = 4/212 (1%)
Frame = -1
Query: 626 VAFNPITVNLIKKTLSRICKEEHKAVTVEQIDLIAKASGGDIRHAISSLQYFCLKPNPML 447
+AFNPITVN IKK L RIC+ E VT + +DLIAKASGGDIRHAI+SLQ+FCL PN +
Sbjct: 286 IAFNPITVNSIKKILFRICQMEQCDVTADNVDLIAKASGGDIRHAITSLQFFCLNPNQVH 345
Query: 446 ALSISDGT----STYSEKGLNLDYEHSLPFGRDETLSLFHALGKFLHNKRVTESSIVSDK 279
+LS S + S K + LD SL FGRDETLSLFHALGKFLHNKR T ++ D+
Sbjct: 346 SLSQSTRSPHALKEESNKPVELDDGSSLYFGRDETLSLFHALGKFLHNKRETGVAVEYDQ 405
Query: 278 DAFCLREQFMRSSLKMDAPEKVLCQAHGQAKTVTDFLHENVLDFINEEAIDDAWTVSSYL 99
+ F + E+F R LKMD PEK+LCQ+H Q V DFLHENVLDF+N+EA++DAW +SSYL
Sbjct: 406 NGFLIHERFSRLPLKMDVPEKILCQSHVQPGPVADFLHENVLDFLNDEAVEDAWILSSYL 465
Query: 98 CDADTXXXXXXXXLITNYEAINVVQSAAASVA 3
DAD + + EA +++QSAAAS+A
Sbjct: 466 GDADILLTKLRGMVSSYNEAESILQSAAASIA 497