BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012973
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containi...   214   4e-54
emb|CBI29835.3| unnamed protein product [Vitis vinifera]              214   4e-54
ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containi...   209   2e-52
ref|XP_003625140.1| Pentatricopeptide repeat-containing protein ...   197   6e-49
ref|XP_004168519.1| PREDICTED: pentatricopeptide repeat-containi...   196   2e-48

>ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Vitis vinifera]
          Length = 848

 Score =  214 bits (546), Expect = 4e-54
 Identities = 111/144 (77%), Positives = 125/144 (86%), Gaps = 1/144 (0%)
 Frame = +3

Query: 6   EAVDLMHVMEQEGVQPNIVSISTLLAACGRCCQKVKIDSILSAAESRGIELNTVAYNSAI 185
           EAV+++H ME+ GVQPNIVSI TLLAACGRC QKVKI S+LSAAE RGI+LNT AYNSAI
Sbjct: 462 EAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAI 521

Query: 186 GSFMSVGEYDKALKLYSSMR-QKVKCDSVTYNLLISGCNKMSRYREALQFFGEMIDLKIP 362
           GS++SVGEYDKAL LY +MR +KVK D VTYN+LISGC KMS+Y EAL F  EM+DLKIP
Sbjct: 522 GSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIP 581

Query: 363 LSKEVYSSAICAYSKQGQLAEAES 434
           LSKEVYSS ICAYSKQGQ+ EAES
Sbjct: 582 LSKEVYSSVICAYSKQGQVTEAES 605


>emb|CBI29835.3| unnamed protein product [Vitis vinifera]
          Length = 852

 Score =  214 bits (546), Expect = 4e-54
 Identities = 111/144 (77%), Positives = 125/144 (86%), Gaps = 1/144 (0%)
 Frame = +3

Query: 6   EAVDLMHVMEQEGVQPNIVSISTLLAACGRCCQKVKIDSILSAAESRGIELNTVAYNSAI 185
           EAV+++H ME+ GVQPNIVSI TLLAACGRC QKVKI S+LSAAE RGI+LNT AYNSAI
Sbjct: 462 EAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAI 521

Query: 186 GSFMSVGEYDKALKLYSSMR-QKVKCDSVTYNLLISGCNKMSRYREALQFFGEMIDLKIP 362
           GS++SVGEYDKAL LY +MR +KVK D VTYN+LISGC KMS+Y EAL F  EM+DLKIP
Sbjct: 522 GSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIP 581

Query: 363 LSKEVYSSAICAYSKQGQLAEAES 434
           LSKEVYSS ICAYSKQGQ+ EAES
Sbjct: 582 LSKEVYSSVICAYSKQGQVTEAES 605


>ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Glycine max]
          Length = 832

 Score =  209 bits (531), Expect = 2e-52
 Identities = 104/145 (71%), Positives = 126/145 (86%), Gaps = 1/145 (0%)
 Frame = +3

Query: 3   AEAVDLMHVMEQEGVQPNIVSISTLLAACGRCCQKVKIDSILSAAESRGIELNTVAYNSA 182
           A+A+ ++  MEQEG+QPN+VSI TLLAACGRC +KVKID++L+AAE RGI+LNTVAYN+A
Sbjct: 450 ADAIKILREMEQEGIQPNVVSICTLLAACGRCSRKVKIDTVLTAAEMRGIKLNTVAYNAA 509

Query: 183 IGSFMSVGEYDKALKLYSSMR-QKVKCDSVTYNLLISGCNKMSRYREALQFFGEMIDLKI 359
           IGS M+VGEYDKA+ LY SMR +K+K DSVTY +LISGC KMS+Y EAL F  E++ LK+
Sbjct: 510 IGSCMNVGEYDKAIGLYKSMRKKKIKTDSVTYTVLISGCCKMSKYGEALSFMEEIMHLKL 569

Query: 360 PLSKEVYSSAICAYSKQGQLAEAES 434
           PLSKEVYSSAICAYSKQGQ+ EAES
Sbjct: 570 PLSKEVYSSAICAYSKQGQIVEAES 594


>ref|XP_003625140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355500155|gb|AES81358.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 855

 Score =  197 bits (502), Expect = 6e-49
 Identities = 100/148 (67%), Positives = 125/148 (84%), Gaps = 5/148 (3%)
 Frame = +3

Query: 6   EAVDLMHVMEQEGVQPNIVSISTLLAACGRCCQKVKIDSILSAAESRGIELNTVAYNSAI 185
           +A++++  MEQ+ + PN+VSI TLLAACGRC QKVKID++LSAAE RGI+LNTVAYNSAI
Sbjct: 450 DAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAI 509

Query: 186 GSFMSVGEYDKALKLYSSMR-QKVKCDSVTYNLLISGCNKMSRYREALQFFGEMIDLKIP 362
           GS+++VGEYDKA+ LY+SMR +K+K DSVTY +LISGC KMS++ EAL F  EM+ LK+P
Sbjct: 510 GSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEALSFMEEMMHLKLP 569

Query: 363 LSKEVYSSAICAYSKQ----GQLAEAES 434
           +SKEVYSS ICAYSKQ    GQ+ EAES
Sbjct: 570 MSKEVYSSIICAYSKQASALGQIIEAES 597


>ref|XP_004168519.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like, partial [Cucumis sativus]
          Length = 594

 Score =  196 bits (497), Expect = 2e-48
 Identities = 98/144 (68%), Positives = 119/144 (82%), Gaps = 1/144 (0%)
 Frame = +3

Query: 6   EAVDLMHVMEQEGVQPNIVSISTLLAACGRCCQKVKIDSILSAAESRGIELNTVAYNSAI 185
           +AVD++  MEQ+G+ PN+VSI TLLAACGR  QKV IDS+LSAAE RGI LNT+A NSAI
Sbjct: 235 QAVDILREMEQDGIHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAI 294

Query: 186 GSFMSVGEYDKALKLYSSMRQK-VKCDSVTYNLLISGCNKMSRYREALQFFGEMIDLKIP 362
           GS+M++GEY+KA+ LY SM  K  K DSVT+ +LISGC +MS+Y EAL FF EM+DL+IP
Sbjct: 295 GSYMNIGEYEKAINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLRIP 354

Query: 363 LSKEVYSSAICAYSKQGQLAEAES 434
           LS E+YSS ICAYSKQGQL +AES
Sbjct: 355 LSSEIYSSMICAYSKQGQLVKAES 378