BLASTX nr result

ID: Bupleurum21_contig00012966 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012966
         (706 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511706.1| leucine rich repeat receptor kinase, putativ...   252   6e-65
ref|XP_002320058.1| predicted protein [Populus trichocarpa] gi|2...   244   2e-62
ref|XP_003622193.1| Receptor-like protein kinase [Medicago trunc...   238   7e-61
ref|XP_002267632.1| PREDICTED: leucine-rich repeat receptor-like...   237   1e-60
ref|XP_002880173.1| hypothetical protein ARALYDRAFT_346338 [Arab...   235   6e-60

>ref|XP_002511706.1| leucine rich repeat receptor kinase, putative [Ricinus communis]
           gi|223548886|gb|EEF50375.1| leucine rich repeat receptor
           kinase, putative [Ricinus communis]
          Length = 627

 Score =  252 bits (643), Expect = 6e-65
 Identities = 129/188 (68%), Positives = 151/188 (80%), Gaps = 1/188 (0%)
 Frame = +3

Query: 144 LHTTLFLIFSFAT-PCLSLSHSTQLPILMAIKSSLDPSNKILFSWSVNATDPCNGSFEGI 320
           +H+ LF + S +     +LS  T+L +LM IK+SLDP+N+ L SW  N T+PC+GSFEG+
Sbjct: 1   MHSLLFYLLSLSVFLSQTLSSPTELELLMQIKASLDPNNRFLTSWEPN-TNPCSGSFEGV 59

Query: 321 ACNPNGQVVNISLQGKGLTGQIPPEIGLLKTLSGLFLHFNELNGVVPKEIANLTQLSDLY 500
           ACN  G V NISLQGKGL+GQIP  +G LK+L+GL+LHFN LNG +PKEIA LT+LSDLY
Sbjct: 60  ACNGQGNVANISLQGKGLSGQIPAALGGLKSLTGLYLHFNALNGEIPKEIAELTELSDLY 119

Query: 501 LNVNNLSGEIPPELGNMSNLQVLQLCYNKFTGSIPIQLRYLRKLTVLALQYNQLTGAIPA 680
           LNVNNLSGEIP ++GNMSNLQVLQLCYNK TGSIP QL  LRKL VLALQYNQLT AIPA
Sbjct: 120 LNVNNLSGEIPSQIGNMSNLQVLQLCYNKLTGSIPTQLGSLRKLNVLALQYNQLTSAIPA 179

Query: 681 SLGDLMLL 704
           SLGDL  L
Sbjct: 180 SLGDLKFL 187



 Score = 62.8 bits (151), Expect = 7e-08
 Identities = 32/84 (38%), Positives = 50/84 (59%)
 Frame = +3

Query: 372 LTGQIPPEIGLLKTLSGLFLHFNELNGVVPKEIANLTQLSDLYLNVNNLSGEIPPELGNM 551
           LTG IP ++G L+ L+ L L +N+L   +P  + +L  L+ L L+ N L G +P +L + 
Sbjct: 149 LTGSIPTQLGSLRKLNVLALQYNQLTSAIPASLGDLKFLTRLDLSFNGLFGSVPVKLASA 208

Query: 552 SNLQVLQLCYNKFTGSIPIQLRYL 623
             LQVL +  N  +G++P  LR L
Sbjct: 209 PMLQVLDIRNNSLSGNLPAALRRL 232


>ref|XP_002320058.1| predicted protein [Populus trichocarpa] gi|222860831|gb|EEE98373.1|
           predicted protein [Populus trichocarpa]
          Length = 644

 Score =  244 bits (622), Expect = 2e-62
 Identities = 122/160 (76%), Positives = 136/160 (85%)
 Frame = +3

Query: 225 MAIKSSLDPSNKILFSWSVNATDPCNGSFEGIACNPNGQVVNISLQGKGLTGQIPPEIGL 404
           M IK+SLDP N++L SW  N  DPC+GSFEG+ACN  G V NISLQGKGL GQIP  +G 
Sbjct: 1   MEIKASLDPQNRLLTSWETNK-DPCSGSFEGVACNELGHVANISLQGKGLLGQIPAALGG 59

Query: 405 LKTLSGLFLHFNELNGVVPKEIANLTQLSDLYLNVNNLSGEIPPELGNMSNLQVLQLCYN 584
           LK+L+GL+LHFN LNGV+PKEIA L++LSDLYLNVNNLSGEIPP +GNMSNLQVLQLCYN
Sbjct: 60  LKSLTGLYLHFNALNGVIPKEIAELSELSDLYLNVNNLSGEIPPHVGNMSNLQVLQLCYN 119

Query: 585 KFTGSIPIQLRYLRKLTVLALQYNQLTGAIPASLGDLMLL 704
           K TGSIP QL  L KL+VLALQYNQLTGAIPASLGDL LL
Sbjct: 120 KLTGSIPTQLGSLEKLSVLALQYNQLTGAIPASLGDLELL 159



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 34/84 (40%), Positives = 48/84 (57%)
 Frame = +3

Query: 372 LTGQIPPEIGLLKTLSGLFLHFNELNGVVPKEIANLTQLSDLYLNVNNLSGEIPPELGNM 551
           LTG IP ++G L+ LS L L +N+L G +P  + +L  LS L L+ N L G IP +L   
Sbjct: 121 LTGSIPTQLGSLEKLSVLALQYNQLTGAIPASLGDLELLSRLDLSFNGLFGPIPVKLAKA 180

Query: 552 SNLQVLQLCYNKFTGSIPIQLRYL 623
             L  L +  N  +G+IP  L+ L
Sbjct: 181 PLLHSLDIRNNSLSGNIPPALKRL 204


>ref|XP_003622193.1| Receptor-like protein kinase [Medicago truncatula]
           gi|355497208|gb|AES78411.1| Receptor-like protein kinase
           [Medicago truncatula]
          Length = 656

 Score =  238 bits (608), Expect = 7e-61
 Identities = 120/187 (64%), Positives = 151/187 (80%)
 Frame = +3

Query: 144 LHTTLFLIFSFATPCLSLSHSTQLPILMAIKSSLDPSNKILFSWSVNATDPCNGSFEGIA 323
           + + +FL+F F +  LSL++  +L  LM IK SLDP N +L SW+ N +DPC+G+F+G+A
Sbjct: 1   MSSLIFLLFIFVSHSLSLNN--ELDTLMLIKDSLDPENHVLLSWN-NHSDPCSGTFDGVA 57

Query: 324 CNPNGQVVNISLQGKGLTGQIPPEIGLLKTLSGLFLHFNELNGVVPKEIANLTQLSDLYL 503
           CN  G V NISLQGKGL+G+IP  IG LK+L+GL+LHFN LNG++PKEIA LTQLSDLYL
Sbjct: 58  CNEQGLVTNISLQGKGLSGEIPSVIGKLKSLTGLYLHFNALNGILPKEIAGLTQLSDLYL 117

Query: 504 NVNNLSGEIPPELGNMSNLQVLQLCYNKFTGSIPIQLRYLRKLTVLALQYNQLTGAIPAS 683
           NVNNLSG IP E+GNMSNLQVLQLC+N+  GSIP +L  L++L+VLALQYN L+GAIPAS
Sbjct: 118 NVNNLSGFIPHEIGNMSNLQVLQLCHNELNGSIPTELGKLKRLSVLALQYNHLSGAIPAS 177

Query: 684 LGDLMLL 704
           LG+L  L
Sbjct: 178 LGELETL 184


>ref|XP_002267632.1| PREDICTED: leucine-rich repeat receptor-like
           serine/threonine-protein kinase At1g17230 [Vitis
           vinifera]
          Length = 681

 Score =  237 bits (605), Expect = 1e-60
 Identities = 123/185 (66%), Positives = 146/185 (78%)
 Frame = +3

Query: 150 TTLFLIFSFATPCLSLSHSTQLPILMAIKSSLDPSNKILFSWSVNATDPCNGSFEGIACN 329
           +TLF+ F+   P L +  +++L  LM IKS+LDP N  L SW++N  DPC+GSFEG+ACN
Sbjct: 8   STLFIFFTLQVPLL-VHGTSELRSLMVIKSTLDPHNLFLSSWTING-DPCDGSFEGVACN 65

Query: 330 PNGQVVNISLQGKGLTGQIPPEIGLLKTLSGLFLHFNELNGVVPKEIANLTQLSDLYLNV 509
             GQV NISLQGKGLTG++ P I  LK L+GL+LH+N L G +P EIANLTQLSDLYLNV
Sbjct: 66  ERGQVANISLQGKGLTGKLSPAIAGLKHLTGLYLHYNSLYGEIPVEIANLTQLSDLYLNV 125

Query: 510 NNLSGEIPPELGNMSNLQVLQLCYNKFTGSIPIQLRYLRKLTVLALQYNQLTGAIPASLG 689
           NNLSG IP ELG M+ LQVLQLCYN+ TGSIP QL  L+KL+VLALQ NQLTGAIPASLG
Sbjct: 126 NNLSGTIPAELGKMATLQVLQLCYNQLTGSIPTQLGSLKKLSVLALQSNQLTGAIPASLG 185

Query: 690 DLMLL 704
           DL +L
Sbjct: 186 DLGML 190



 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 35/84 (41%), Positives = 49/84 (58%)
 Frame = +3

Query: 372 LTGQIPPEIGLLKTLSGLFLHFNELNGVVPKEIANLTQLSDLYLNVNNLSGEIPPELGNM 551
           LTG IP ++G LK LS L L  N+L G +P  + +L  L  L L+ N L G IP  L ++
Sbjct: 152 LTGSIPTQLGSLKKLSVLALQSNQLTGAIPASLGDLGMLVRLDLSFNRLFGSIPRRLADV 211

Query: 552 SNLQVLQLCYNKFTGSIPIQLRYL 623
            +L+VL +  N  +G IP  L+ L
Sbjct: 212 VSLEVLDIRNNTLSGKIPPALKRL 235


>ref|XP_002880173.1| hypothetical protein ARALYDRAFT_346338 [Arabidopsis lyrata subsp.
           lyrata] gi|297326012|gb|EFH56432.1| hypothetical protein
           ARALYDRAFT_346338 [Arabidopsis lyrata subsp. lyrata]
          Length = 692

 Score =  235 bits (600), Expect = 6e-60
 Identities = 123/188 (65%), Positives = 152/188 (80%), Gaps = 4/188 (2%)
 Frame = +3

Query: 153 TLFLI---FSFATPCLSLSHSTQLPILMAIKSSLDPSNKILFSWSVNATDPCN-GSFEGI 320
           +LFLI   F F +P LS S S++L IL+ IKSSLDP  + L SW+ +A DPC+ GSF+G+
Sbjct: 6   SLFLILFFFFFLSPSLS-SSSSELDILLDIKSSLDPEKRFLTSWTPDA-DPCSSGSFDGV 63

Query: 321 ACNPNGQVVNISLQGKGLTGQIPPEIGLLKTLSGLFLHFNELNGVVPKEIANLTQLSDLY 500
           AC+ N +V NISLQG GLTG IPP IGLL +L+GL+LHFN L G +PK+I+NL  L+DLY
Sbjct: 64  ACDGNRRVANISLQGMGLTGTIPPSIGLLTSLTGLYLHFNSLTGHIPKDISNLPLLTDLY 123

Query: 501 LNVNNLSGEIPPELGNMSNLQVLQLCYNKFTGSIPIQLRYLRKLTVLALQYNQLTGAIPA 680
           LNVNNLSGEIPP++GN+ NLQV+QLCYNK +GSIP QL  L+K+TVLALQYNQL+GAIPA
Sbjct: 124 LNVNNLSGEIPPQIGNLDNLQVIQLCYNKLSGSIPTQLGSLQKITVLALQYNQLSGAIPA 183

Query: 681 SLGDLMLL 704
           SLGD+  L
Sbjct: 184 SLGDISTL 191



 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 35/108 (32%), Positives = 59/108 (54%)
 Frame = +3

Query: 372 LTGQIPPEIGLLKTLSGLFLHFNELNGVVPKEIANLTQLSDLYLNVNNLSGEIPPELGNM 551
           L+G IP ++G L+ ++ L L +N+L+G +P  + +++ L+ L L+ NNL G +P +L   
Sbjct: 153 LSGSIPTQLGSLQKITVLALQYNQLSGAIPASLGDISTLTRLDLSFNNLFGPVPVKLAGA 212

Query: 552 SNLQVLQLCYNKFTGSIPIQLRYLRKLTVLALQYNQLTGAIPASLGDL 695
             L+VL +  N F+G +P  L+ L        QY+   G       DL
Sbjct: 213 PLLEVLDIRNNSFSGFVPSALKRLNN----GFQYSNNHGLCGDGFTDL 256


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