BLASTX nr result

ID: Bupleurum21_contig00012962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012962
         (754 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17902.3| unnamed protein product [Vitis vinifera]               82   1e-13
ref|XP_002263344.1| PREDICTED: uncharacterized protein LOC100263...    82   1e-13
ref|XP_004140277.1| PREDICTED: uncharacterized protein LOC101206...    81   3e-13
ref|XP_003617221.1| LAS1-like protein [Medicago truncatula] gi|3...    76   9e-12
ref|XP_002314010.1| predicted protein [Populus trichocarpa] gi|2...    71   3e-10

>emb|CBI17902.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 50/123 (40%), Positives = 70/123 (56%), Gaps = 8/123 (6%)
 Frame = +1

Query: 1   WNSCSIGMLPPAIGYSAHLPVLDSEECHEEVRGSSEIKE-QQLNLCNGKREADYGVQNLH 177
           WN C IGMLP A+G S  LP LD  +  +    SSE +E  +L  C+ KREA + ++ L 
Sbjct: 427 WNPCPIGMLPRALGSSGRLPALDHNDNQKMPPESSERRELWELKHCSRKREACFDIEMLD 486

Query: 178 NSCPKRLKGRETILKSKEKGNQS-------LEGYHGHLRVGGVWKIVGEDEICAVESDIR 336
           NS  K++  RET+     +G+ S        EG  G L + GVWK V  +E+ A++S +R
Sbjct: 487 NSSVKKM--RETVEDQTIEGHDSDDKDVTLCEGVKGQLLINGVWKKVEREELLAIKSAVR 544

Query: 337 ILV 345
           ILV
Sbjct: 545 ILV 547


>ref|XP_002263344.1| PREDICTED: uncharacterized protein LOC100263330 [Vitis vinifera]
          Length = 597

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 50/123 (40%), Positives = 70/123 (56%), Gaps = 8/123 (6%)
 Frame = +1

Query: 1   WNSCSIGMLPPAIGYSAHLPVLDSEECHEEVRGSSEIKE-QQLNLCNGKREADYGVQNLH 177
           WN C IGMLP A+G S  LP LD  +  +    SSE +E  +L  C+ KREA + ++ L 
Sbjct: 477 WNPCPIGMLPRALGSSGRLPALDHNDNQKMPPESSERRELWELKHCSRKREACFDIEMLD 536

Query: 178 NSCPKRLKGRETILKSKEKGNQS-------LEGYHGHLRVGGVWKIVGEDEICAVESDIR 336
           NS  K++  RET+     +G+ S        EG  G L + GVWK V  +E+ A++S +R
Sbjct: 537 NSSVKKM--RETVEDQTIEGHDSDDKDVTLCEGVKGQLLINGVWKKVEREELLAIKSAVR 594

Query: 337 ILV 345
           ILV
Sbjct: 595 ILV 597


>ref|XP_004140277.1| PREDICTED: uncharacterized protein LOC101206515 [Cucumis sativus]
           gi|449481172|ref|XP_004156103.1| PREDICTED:
           uncharacterized protein LOC101227409 [Cucumis sativus]
          Length = 607

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 45/116 (38%), Positives = 66/116 (56%), Gaps = 1/116 (0%)
 Frame = +1

Query: 1   WNSCSIGMLPPAIGYSAHLPVLDSEECHEEVRGSSEIKEQ-QLNLCNGKREADYGVQNLH 177
           W  C IGMLP +IG S    VLD    +E        KE+ +LN  + KREA   + +L 
Sbjct: 492 WTPCPIGMLPRSIGCSGRPSVLDLNPENEPTSEELRSKEKCELNNSSQKREASSDIHHLD 551

Query: 178 NSCPKRLKGRETILKSKEKGNQSLEGYHGHLRVGGVWKIVGEDEICAVESDIRILV 345
           NS  K++K      + + +  +S EG  G L +GG+WK VGE+E+ A++S +RIL+
Sbjct: 552 NSIVKKMKDTNDKSQLETEDVESPEGIKGRLLIGGIWKNVGEEELSAIQSAVRILI 607


>ref|XP_003617221.1| LAS1-like protein [Medicago truncatula] gi|355518556|gb|AET00180.1|
           LAS1-like protein [Medicago truncatula]
          Length = 603

 Score = 75.9 bits (185), Expect = 9e-12
 Identities = 43/120 (35%), Positives = 65/120 (54%), Gaps = 5/120 (4%)
 Frame = +1

Query: 1   WNSCSIGMLPPAIGYSAHLPVLDSEECHEEVRGSSEIKEQQLNLCNGKREADYGVQNLHN 180
           WN C IGMLP  +G S  LPVLD  +  E  + S   +  +L   + KR+A   +Q L N
Sbjct: 484 WNPCPIGMLPRVVGSSGCLPVLDVIDNEEHNQASERKENWKLIKHSAKRDAPSDIQLLDN 543

Query: 181 SCPKRLKGRETI-----LKSKEKGNQSLEGYHGHLRVGGVWKIVGEDEICAVESDIRILV 345
           S  K+++  E         S E+     +   G+L VGG+WK V E+E+ +++S +RIL+
Sbjct: 544 STVKKMRETEEFGELNDESSMEEDESPTDEGKGYLMVGGIWKKVTEEELLSIQSSVRILI 603


>ref|XP_002314010.1| predicted protein [Populus trichocarpa] gi|222850418|gb|EEE87965.1|
           predicted protein [Populus trichocarpa]
          Length = 617

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 47/125 (37%), Positives = 67/125 (53%), Gaps = 10/125 (8%)
 Frame = +1

Query: 1   WNSCSIGMLPPAIGYSAHLPVLDSEECHEEVRGSSEIKE--------QQLNLCNGKREAD 156
           WN C IGMLP  +G S  LPVLD ++  ++   +SE K+          +     KREAD
Sbjct: 495 WNPCPIGMLPRDLGSSGCLPVLDCDDDGKKSVHASERKQIWELKQYYTSVERTGSKREAD 554

Query: 157 YGVQNLHNSCPKRLKGRETILKSKEKGNQSL--EGYHGHLRVGGVWKIVGEDEICAVESD 330
             +  L  +  K++  RET    + +G   L  +   G L + GVWK VGE+E+ A+ SD
Sbjct: 555 SDIYLLDKASVKKM--RETADSFESEGENVLLSKDDKGCLMINGVWKKVGEEELLAIMSD 612

Query: 331 IRILV 345
           +RILV
Sbjct: 613 VRILV 617


Top