BLASTX nr result

ID: Bupleurum21_contig00012946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012946
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518443.1| PREDICTED: LOW QUALITY PROTEIN: putative BPI...   114   1e-23
ref|NP_001241365.1| uncharacterized protein LOC100808142 precurs...   113   1e-23
ref|XP_002272020.1| PREDICTED: putative BPI/LBP family protein A...   113   2e-23
ref|XP_002321159.1| predicted protein [Populus trichocarpa] gi|2...   104   7e-21
ref|XP_004138604.1| PREDICTED: putative BPI/LBP family protein A...   102   4e-20

>ref|XP_003518443.1| PREDICTED: LOW QUALITY PROTEIN: putative BPI/LBP family protein
           At3g20270-like [Glycine max]
          Length = 343

 Score =  114 bits (284), Expect = 1e-23
 Identities = 56/103 (54%), Positives = 78/103 (75%), Gaps = 5/103 (4%)
 Frame = +3

Query: 108 IFFIVCVLTPSCSGEFT-----DQSFISMRISQNGLDFLKGLLVNNAIASLTPLQLPQIQ 272
           +FF++ +L  S +  +      +++FIS+ I+QNGLDF+K LLVN AI+SL  L LP I+
Sbjct: 3   LFFVLFLLASSLTQGYAQFQLKNEAFISLLITQNGLDFMKELLVNKAISSLASLGLPNIE 62

Query: 273 KTVKIPVIGKVHILLSNISIYHVDVPDSDIKPGNTGIAIVGSG 401
           KTVKIPV+G V+++LSNIS YH+DVP S +KPG TGI+I+ SG
Sbjct: 63  KTVKIPVVGSVYMVLSNISSYHIDVPSSHVKPGETGISIIASG 105


>ref|NP_001241365.1| uncharacterized protein LOC100808142 precursor [Glycine max]
           gi|255641286|gb|ACU20920.1| unknown [Glycine max]
          Length = 441

 Score =  113 bits (283), Expect = 1e-23
 Identities = 55/102 (53%), Positives = 78/102 (76%), Gaps = 5/102 (4%)
 Frame = +3

Query: 111 FFIVCVLTPSCSGEFT-----DQSFISMRISQNGLDFLKGLLVNNAIASLTPLQLPQIQK 275
           FF++ +L  S +  +      +++FIS+ I+QNGLDF+K LLVN AI+SL  L+LP I+K
Sbjct: 4   FFVLFLLASSLTQGYAQFQPKNEAFISLLITQNGLDFVKELLVNKAISSLVSLRLPNIEK 63

Query: 276 TVKIPVIGKVHILLSNISIYHVDVPDSDIKPGNTGIAIVGSG 401
           T KIPV+G V+++LSNI+IYH+DVP S +KPG TGI+I+ SG
Sbjct: 64  TAKIPVVGNVYMVLSNITIYHIDVPSSHVKPGETGISIIASG 105


>ref|XP_002272020.1| PREDICTED: putative BPI/LBP family protein At3g20270 [Vitis
           vinifera] gi|297739241|emb|CBI28892.3| unnamed protein
           product [Vitis vinifera]
          Length = 498

 Score =  113 bits (282), Expect = 2e-23
 Identities = 57/99 (57%), Positives = 75/99 (75%), Gaps = 1/99 (1%)
 Frame = +3

Query: 108 IFFIVCVLTPSCSG-EFTDQSFISMRISQNGLDFLKGLLVNNAIASLTPLQLPQIQKTVK 284
           IF    + TPS +  + T+ SFIS+ IS  GLDF+K LL+  AI+SLTPLQLPQI+K+VK
Sbjct: 8   IFIAFLLFTPSQAHLKSTESSFISILISSQGLDFIKNLLITKAISSLTPLQLPQIKKSVK 67

Query: 285 IPVIGKVHILLSNISIYHVDVPDSDIKPGNTGIAIVGSG 401
           IP +G+V I  SNI+IYH+DV  S+I PG+TG+AI+ SG
Sbjct: 68  IPFLGRVDIAFSNITIYHIDVSSSNIAPGDTGVAIIASG 106


>ref|XP_002321159.1| predicted protein [Populus trichocarpa] gi|222861932|gb|EEE99474.1|
           predicted protein [Populus trichocarpa]
          Length = 492

 Score =  104 bits (260), Expect = 7e-21
 Identities = 54/106 (50%), Positives = 72/106 (67%), Gaps = 1/106 (0%)
 Frame = +3

Query: 87  MATVAACIFFIVCVLT-PSCSGEFTDQSFISMRISQNGLDFLKGLLVNNAIASLTPLQLP 263
           MA        I+C+L  PS   +   ++F ++ ISQ GLDFLK LL+  AI+S+ PL+LP
Sbjct: 1   MAQTLPLFLLIICLLLIPSSQIQQEQEAFTTIVISQQGLDFLKNLLITQAISSIIPLKLP 60

Query: 264 QIQKTVKIPVIGKVHILLSNISIYHVDVPDSDIKPGNTGIAIVGSG 401
            I KT K P +G VH+LLSNI+IY + V DS +KPG+TGIAI+ SG
Sbjct: 61  NITKTAKFPFLGYVHMLLSNITIYQLQVLDSYVKPGDTGIAIIASG 106


>ref|XP_004138604.1| PREDICTED: putative BPI/LBP family protein At1g04970-like [Cucumis
           sativus]
          Length = 495

 Score =  102 bits (253), Expect = 4e-20
 Identities = 49/94 (52%), Positives = 68/94 (72%)
 Frame = +3

Query: 120 VCVLTPSCSGEFTDQSFISMRISQNGLDFLKGLLVNNAIASLTPLQLPQIQKTVKIPVIG 299
           V  L P  +     QSF S  I+Q GLDFLK L ++ AI+S+ P+ LPQ +KTVKIP +G
Sbjct: 16  VSSLIPGDAYSSPTQSFASTVITQKGLDFLKDLFIDKAISSVIPINLPQSEKTVKIPFVG 75

Query: 300 KVHILLSNISIYHVDVPDSDIKPGNTGIAIVGSG 401
            VH++LSN +IY +DVP S++KPG++G++IV SG
Sbjct: 76  NVHMVLSNTTIYQLDVPSSNVKPGDSGVSIVASG 109


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