BLASTX nr result

ID: Bupleurum21_contig00012933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012933
         (739 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285765.1| PREDICTED: uncharacterized protein LOC100250...   200   5e-56
ref|XP_002303979.1| predicted protein [Populus trichocarpa] gi|2...   195   7e-55
ref|XP_003601604.1| RING finger protein [Medicago truncatula] gi...   192   4e-54
emb|CBI16568.3| unnamed protein product [Vitis vinifera]              200   8e-54
ref|XP_002297615.1| predicted protein [Populus trichocarpa] gi|2...   188   4e-53

>ref|XP_002285765.1| PREDICTED: uncharacterized protein LOC100250148 isoform 1 [Vitis
           vinifera] gi|225435818|ref|XP_002285766.1| PREDICTED:
           uncharacterized protein LOC100250148 isoform 2 [Vitis
           vinifera]
          Length = 368

 Score =  200 bits (508), Expect(2) = 5e-56
 Identities = 89/116 (76%), Positives = 101/116 (87%)
 Frame = +3

Query: 387 GSLGDYFIGPGLDLLLQHLAENDPNRYGTPPAQKDAVEALPTVKVDGNLQCSVCLEDFEV 566
           GSLGDYFIGP LDLLLQHLAENDPNRYGTPPAQKDA+EA+PTVK+  NLQCSVCL+DFE+
Sbjct: 190 GSLGDYFIGPSLDLLLQHLAENDPNRYGTPPAQKDAIEAMPTVKIKENLQCSVCLDDFEI 249

Query: 567 GAEAKEMPCKHRFHSDCILPWLDLHSSCPVCRHQLPCDDSKLGRDIGETNNGNSSD 734
           GAEA+EMPCKH+FHS CILPWL+LHSSCPVCR Q+  D+SKL  D     + NSS+
Sbjct: 250 GAEAREMPCKHKFHSGCILPWLELHSSCPVCRFQIAADESKLDSDASPNVSSNSSE 305



 Score = 44.3 bits (103), Expect(2) = 5e-56
 Identities = 28/55 (50%), Positives = 31/55 (56%)
 Frame = +1

Query: 100 QLLQGIRAGIQSESEXXXXXXXXXXXXXXXXXXXXXVILINPFNQTIIVQSSYGS 264
           QLLQGIRAG+ SESE                     +ILINPFNQTIIVQ S+ S
Sbjct: 125 QLLQGIRAGMVSESENSENDRDRDRDRERERERER-LILINPFNQTIIVQGSFDS 178


>ref|XP_002303979.1| predicted protein [Populus trichocarpa] gi|222841411|gb|EEE78958.1|
           predicted protein [Populus trichocarpa]
          Length = 356

 Score =  195 bits (495), Expect(2) = 7e-55
 Identities = 87/102 (85%), Positives = 95/102 (93%)
 Frame = +3

Query: 387 GSLGDYFIGPGLDLLLQHLAENDPNRYGTPPAQKDAVEALPTVKVDGNLQCSVCLEDFEV 566
           GSLGDY IGPGLDLLLQHLAENDPNRYGTPPAQK+A+EALPTV V   LQCSVCL+DFE+
Sbjct: 189 GSLGDYVIGPGLDLLLQHLAENDPNRYGTPPAQKEAIEALPTVTVKEPLQCSVCLDDFEI 248

Query: 567 GAEAKEMPCKHRFHSDCILPWLDLHSSCPVCRHQLPCDDSKL 692
           GAEA+EMPCKH+FHS CILPWL+LHSSCPVCRHQLP D+SKL
Sbjct: 249 GAEAREMPCKHKFHSGCILPWLELHSSCPVCRHQLPADESKL 290



 Score = 45.4 bits (106), Expect(2) = 7e-55
 Identities = 27/57 (47%), Positives = 28/57 (49%)
 Frame = +1

Query: 100 QLLQGIRAGIQSESEXXXXXXXXXXXXXXXXXXXXXVILINPFNQTIIVQSSYGSGN 270
           QLLQGIRAGI                          VILINPFNQ+IIVQ SY S N
Sbjct: 123 QLLQGIRAGILVSESENLEGDRDRDRVRDMNRERERVILINPFNQSIIVQGSYDSNN 179


>ref|XP_003601604.1| RING finger protein [Medicago truncatula]
           gi|355490652|gb|AES71855.1| RING finger protein
           [Medicago truncatula]
          Length = 352

 Score =  192 bits (488), Expect(2) = 4e-54
 Identities = 85/116 (73%), Positives = 98/116 (84%)
 Frame = +3

Query: 387 GSLGDYFIGPGLDLLLQHLAENDPNRYGTPPAQKDAVEALPTVKVDGNLQCSVCLEDFEV 566
           G+LGDYF+GPGLDLLLQHL+ENDPNRYGTPPA K+AVE+LPTVK++ NLQCSVCL+DFEV
Sbjct: 183 GALGDYFVGPGLDLLLQHLSENDPNRYGTPPAPKEAVESLPTVKINENLQCSVCLDDFEV 242

Query: 567 GAEAKEMPCKHRFHSDCILPWLDLHSSCPVCRHQLPCDDSKLGRDIGETNNGNSSD 734
           G+EAKEMPCKHRFHS CILPWL+LHSSCPVCR QL  D+ K   D+   +     D
Sbjct: 243 GSEAKEMPCKHRFHSACILPWLELHSSCPVCRSQLRVDEPKQDSDVSRNHRNQRDD 298



 Score = 45.8 bits (107), Expect(2) = 4e-54
 Identities = 29/55 (52%), Positives = 30/55 (54%)
 Frame = +1

Query: 100 QLLQGIRAGIQSESEXXXXXXXXXXXXXXXXXXXXXVILINPFNQTIIVQSSYGS 264
           QLLQGIRAG+ SES                      VILINPFNQTIIVQ SY S
Sbjct: 122 QLLQGIRAGLTSESHENTDSDDRVREREREH-----VILINPFNQTIIVQGSYDS 171


>emb|CBI16568.3| unnamed protein product [Vitis vinifera]
          Length = 349

 Score =  200 bits (508), Expect(2) = 8e-54
 Identities = 89/116 (76%), Positives = 101/116 (87%)
 Frame = +3

Query: 387 GSLGDYFIGPGLDLLLQHLAENDPNRYGTPPAQKDAVEALPTVKVDGNLQCSVCLEDFEV 566
           GSLGDYFIGP LDLLLQHLAENDPNRYGTPPAQKDA+EA+PTVK+  NLQCSVCL+DFE+
Sbjct: 144 GSLGDYFIGPSLDLLLQHLAENDPNRYGTPPAQKDAIEAMPTVKIKENLQCSVCLDDFEI 203

Query: 567 GAEAKEMPCKHRFHSDCILPWLDLHSSCPVCRHQLPCDDSKLGRDIGETNNGNSSD 734
           GAEA+EMPCKH+FHS CILPWL+LHSSCPVCR Q+  D+SKL  D     + NSS+
Sbjct: 204 GAEAREMPCKHKFHSGCILPWLELHSSCPVCRFQIAADESKLDSDASPNVSSNSSE 259



 Score = 37.0 bits (84), Expect(2) = 8e-54
 Identities = 24/55 (43%), Positives = 28/55 (50%)
 Frame = +1

Query: 100 QLLQGIRAGIQSESEXXXXXXXXXXXXXXXXXXXXXVILINPFNQTIIVQSSYGS 264
           QLLQGIRAG++                         +ILINPFNQTIIVQ S+ S
Sbjct: 103 QLLQGIRAGMR-------------------------LILINPFNQTIIVQGSFDS 132


>ref|XP_002297615.1| predicted protein [Populus trichocarpa] gi|222844873|gb|EEE82420.1|
           predicted protein [Populus trichocarpa]
          Length = 340

 Score =  188 bits (478), Expect(2) = 4e-53
 Identities = 87/116 (75%), Positives = 99/116 (85%)
 Frame = +3

Query: 387 GSLGDYFIGPGLDLLLQHLAENDPNRYGTPPAQKDAVEALPTVKVDGNLQCSVCLEDFEV 566
           GS GDYFIGPGLDLLLQHLA+NDPNRYGT PAQK+AVEALPTV +   LQCSVCL+DFE+
Sbjct: 177 GSFGDYFIGPGLDLLLQHLADNDPNRYGTLPAQKEAVEALPTVIIKEPLQCSVCLDDFEI 236

Query: 567 GAEAKEMPCKHRFHSDCILPWLDLHSSCPVCRHQLPCDDSKLGRDIGETNNGNSSD 734
           G++A+EMPCKH+FHS CILPWL+LHSSCPVCRHQLP D+SKL  +       NSSD
Sbjct: 237 GSKAREMPCKHKFHSGCILPWLELHSSCPVCRHQLPADESKLDSERAR----NSSD 288



 Score = 46.2 bits (108), Expect(2) = 4e-53
 Identities = 27/57 (47%), Positives = 28/57 (49%)
 Frame = +1

Query: 100 QLLQGIRAGIQSESEXXXXXXXXXXXXXXXXXXXXXVILINPFNQTIIVQSSYGSGN 270
           QLLQGIRAGI +                        VILINPFNQ IIVQ SY S N
Sbjct: 111 QLLQGIRAGILASESENSEGDRDGERDRDRDRDRERVILINPFNQNIIVQGSYDSNN 167


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