BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012915
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containi...    97   1e-18
ref|XP_002511573.1| pentatricopeptide repeat-containing protein,...    96   4e-18
ref|NP_177599.1| pentatricopeptide repeat-containing protein [Ar...    71   1e-10
ref|XP_002888986.1| hypothetical protein ARALYDRAFT_476599 [Arab...    67   1e-09
ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containi...    64   2e-08

>ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
           chloroplastic [Vitis vinifera]
           gi|297733984|emb|CBI15231.3| unnamed protein product
           [Vitis vinifera]
          Length = 893

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 49/85 (57%), Positives = 62/85 (72%)
 Frame = -3

Query: 256 LARNTFDMMPVKDQAACSSLISGLAHTGSIEESLQLFHYMLMTDLEIDSFTLSSLVGAAA 77
           LAR  FDM+P KDQ +CSSL+SG A  G IE++L LFH + M DL IDSFT+SS++GA A
Sbjct: 602 LARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVA 661

Query: 76  KLNIPGVGIQMHAHIIKLGLEYEVS 2
            LN   +G Q+HA + K+GL  EVS
Sbjct: 662 ILNSLDIGTQLHACVTKMGLNAEVS 686


>ref|XP_002511573.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550688|gb|EEF52175.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 954

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 46/84 (54%), Positives = 63/84 (75%)
 Frame = -3

Query: 253 ARNTFDMMPVKDQAACSSLISGLAHTGSIEESLQLFHYMLMTDLEIDSFTLSSLVGAAAK 74
           AR  FD++ VKDQ +CSSL+SG A  G +EE+L LFH ML+++  IDSF +SS++GA A 
Sbjct: 606 ARKMFDLLAVKDQVSCSSLVSGYAQNGWLEEALLLFHEMLISNFTIDSFAVSSVLGAIAG 665

Query: 73  LNIPGVGIQMHAHIIKLGLEYEVS 2
           LN    G Q+HAH++KLGL+ +VS
Sbjct: 666 LNRLDFGTQLHAHLVKLGLDSDVS 689


>ref|NP_177599.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75169837|sp|Q9CA56.1|PP121_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g74600, chloroplastic; Flags: Precursor
           gi|12324789|gb|AAG52351.1|AC011765_3 hypothetical
           protein; 84160-81473 [Arabidopsis thaliana]
           gi|332197493|gb|AEE35614.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 895

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 37/85 (43%), Positives = 54/85 (63%)
 Frame = -3

Query: 256 LARNTFDMMPVKDQAACSSLISGLAHTGSIEESLQLFHYMLMTDLEIDSFTLSSLVGAAA 77
           LAR  +D +P  D  +CSSLISG +  G I++   LF  M+M+   +DSF +SS++ AAA
Sbjct: 604 LARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAA 663

Query: 76  KLNIPGVGIQMHAHIIKLGLEYEVS 2
             +   +G Q+HA+I K+GL  E S
Sbjct: 664 LSDESSLGAQVHAYITKIGLCTEPS 688


>ref|XP_002888986.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
           lyrata] gi|297334827|gb|EFH65245.1| hypothetical protein
           ARALYDRAFT_476599 [Arabidopsis lyrata subsp. lyrata]
          Length = 717

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/85 (40%), Positives = 52/85 (61%)
 Frame = -3

Query: 256 LARNTFDMMPVKDQAACSSLISGLAHTGSIEESLQLFHYMLMTDLEIDSFTLSSLVGAAA 77
           LAR  +D +P  D  +CSSLISG +  G +++   LF  M+M+   +DS+ +SS++ AA 
Sbjct: 426 LARKVYDRLPEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSMDSYAISSILKAAV 485

Query: 76  KLNIPGVGIQMHAHIIKLGLEYEVS 2
                 +G Q+HA+I K+GL  E S
Sbjct: 486 LSEESELGAQVHAYITKIGLCTEPS 510


>ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 817

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/78 (37%), Positives = 50/78 (64%)
 Frame = -3

Query: 241 FDMMPVKDQAACSSLISGLAHTGSIEESLQLFHYMLMTDLEIDSFTLSSLVGAAAKLNIP 62
           FD MP KD  + +++IS     G  +E+L LF+ M   DL +DS T+++L+ AA+ L  P
Sbjct: 372 FDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNP 431

Query: 61  GVGIQMHAHIIKLGLEYE 8
            +G Q H ++++ G+++E
Sbjct: 432 DIGKQTHGYLLRNGIQFE 449