BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012906
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270695.1| PREDICTED: pentatricopeptide repeat-containi...   108   5e-22
emb|CAN74703.1| hypothetical protein VITISV_029224 [Vitis vinifera]   108   5e-22
ref|XP_003613604.1| Pentatricopeptide repeat-containing protein ...   107   8e-22
ref|XP_003519768.1| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21
gb|ABK28160.1| unknown [Arabidopsis thaliana]                         107   1e-21

>ref|XP_002270695.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02750
           [Vitis vinifera] gi|296086418|emb|CBI32007.3| unnamed
           protein product [Vitis vinifera]
          Length = 617

 Score =  108 bits (270), Expect = 5e-22
 Identities = 46/86 (53%), Positives = 67/86 (77%)
 Frame = +3

Query: 96  VYMKCGQPSNARHIFNKFELKPKDPAIWNAVISGYGRNGEHEAALQVFGLMLKEDVKPNS 275
           +YMKCG    AR +F +F++KP DPA WNA+ISGYGRNG++++A ++F  M +E V+PNS
Sbjct: 414 MYMKCGHSYLARRVFCQFQIKPDDPAFWNAMISGYGRNGKYQSAFEIFNQMQEEKVQPNS 473

Query: 276 ATFNCILSVCSHSGEVEKGQEILPMI 353
           AT   ILSVCSH+GE+++G ++  M+
Sbjct: 474 ATLVSILSVCSHTGEIDRGWQLFKMM 499


>emb|CAN74703.1| hypothetical protein VITISV_029224 [Vitis vinifera]
          Length = 677

 Score =  108 bits (270), Expect = 5e-22
 Identities = 46/86 (53%), Positives = 67/86 (77%)
 Frame = +3

Query: 96  VYMKCGQPSNARHIFNKFELKPKDPAIWNAVISGYGRNGEHEAALQVFGLMLKEDVKPNS 275
           +YMKCG    AR +F +F++KP DPA WNA+ISGYGRNG++++A ++F  M +E V+PNS
Sbjct: 474 MYMKCGHSYLARRVFCQFQIKPDDPAFWNAMISGYGRNGKYQSAFEIFNQMQEEKVQPNS 533

Query: 276 ATFNCILSVCSHSGEVEKGQEILPMI 353
           AT   ILSVCSH+GE+++G ++  M+
Sbjct: 534 ATLVSILSVCSHTGEIDRGWQLFKMM 559


>ref|XP_003613604.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355514939|gb|AES96562.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 620

 Score =  107 bits (268), Expect = 8e-22
 Identities = 49/85 (57%), Positives = 64/85 (75%)
 Frame = +3

Query: 99  YMKCGQPSNARHIFNKFELKPKDPAIWNAVISGYGRNGEHEAALQVFGLMLKEDVKPNSA 278
           YMKCG  S AR +F++F++KP DPA WNA+I GYG NG++E+A +VF  ML E V+PNSA
Sbjct: 419 YMKCGCVSFARFVFDQFDVKPDDPAFWNAMIGGYGTNGDYESAFEVFYEMLDEMVQPNSA 478

Query: 279 TFNCILSVCSHSGEVEKGQEILPMI 353
           TF  +LS CSHSG++E+G     MI
Sbjct: 479 TFVSVLSACSHSGQIERGLRFFRMI 503


>ref|XP_003519768.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02750-like [Glycine max]
          Length = 627

 Score =  107 bits (266), Expect = 1e-21
 Identities = 46/86 (53%), Positives = 66/86 (76%)
 Frame = +3

Query: 96  VYMKCGQPSNARHIFNKFELKPKDPAIWNAVISGYGRNGEHEAALQVFGLMLKEDVKPNS 275
           +YMKCG  S AR +F++++ KP DPA WNA+I GYGRNG++E+A ++F  ML+E V+PNS
Sbjct: 424 MYMKCGLASWARGVFDQYDAKPDDPAFWNAMIGGYGRNGDYESAFEIFDEMLEEMVRPNS 483

Query: 276 ATFNCILSVCSHSGEVEKGQEILPMI 353
           ATF  +LS CSH+G+V++G     M+
Sbjct: 484 ATFVSVLSACSHTGQVDRGLHFFRMM 509


>gb|ABK28160.1| unknown [Arabidopsis thaliana]
          Length = 614

 Score =  107 bits (266), Expect = 1e-21
 Identities = 47/86 (54%), Positives = 65/86 (75%)
 Frame = +3

Query: 96  VYMKCGQPSNARHIFNKFELKPKDPAIWNAVISGYGRNGEHEAALQVFGLMLKEDVKPNS 275
           +YMKCG  S AR IF++FE KPKDP  WN +ISGYG++GE E+A+++F L+ +E V+P+ 
Sbjct: 412 MYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSL 471

Query: 276 ATFNCILSVCSHSGEVEKGQEILPMI 353
           ATF  +LS CSH G VEKG +I  ++
Sbjct: 472 ATFTAVLSACSHCGNVEKGSQIFRLM 497



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 6/119 (5%)
 Frame = +3

Query: 3   VTMFSNCRELVLASKVFKQI-DNKSLVCYNQLV--YMKCGQPSNARHIFNKFE---LKPK 164
           + M+S CR    A  VF ++ D ++L+ +N ++   M  GQ   A  +F K +   LKP 
Sbjct: 273 IDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKP- 331

Query: 165 DPAIWNAVISGYGRNGEHEAALQVFGLMLKEDVKPNSATFNCILSVCSHSGEVEKGQEI 341
           D A WN++ISG+ + G+   A + F  ML   + P+      +LS CS    ++ G+EI
Sbjct: 332 DSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEI 390