BLASTX nr result

ID: Bupleurum21_contig00012873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012873
         (673 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509778.1| RNA-binding protein nob1, putative [Ricinus ...   277   2e-72
ref|XP_002269627.2| PREDICTED: RNA-binding protein NOB1-like [Vi...   271   1e-70
emb|CBI34688.3| unnamed protein product [Vitis vinifera]              271   1e-70
emb|CAN66411.1| hypothetical protein VITISV_020978 [Vitis vinifera]   267   2e-69
ref|XP_002303575.1| predicted protein [Populus trichocarpa] gi|2...   256   4e-66

>ref|XP_002509778.1| RNA-binding protein nob1, putative [Ricinus communis]
           gi|223549677|gb|EEF51165.1| RNA-binding protein nob1,
           putative [Ricinus communis]
          Length = 628

 Score =  277 bits (708), Expect = 2e-72
 Identities = 127/180 (70%), Positives = 153/180 (85%)
 Frame = +3

Query: 132 CWSNIVKQPPQSTSNEPTITQIASSVVARDCKSTKGIAMAVVDANAIIQGGEKLHNMAEK 311
           CWSNIVK PPQ  +N+       + +    CKS+KGI+MAV+DANA+I+GGEKLHN+A+K
Sbjct: 15  CWSNIVKNPPQQPNNQNPSPNPTNQIFVESCKSSKGISMAVIDANAVIEGGEKLHNLADK 74

Query: 312 FVSVSEVIDEVRDPRSRHSLNILPFTVNTVEPSPDSLKKVINFARETGDLQTLSDVDLKL 491
           FV+V EV+ E+RDP SRH L+ +PFT++++EPS D+L KVI FAR TGDLQTLSDVDLKL
Sbjct: 75  FVTVPEVLAEIRDPVSRHRLSFVPFTIDSLEPSTDALNKVIKFARATGDLQTLSDVDLKL 134

Query: 492 IALTYMLEAQVHGTKHIRDSPPPMHTVNVKRLPEKDLPGWGSNVPNLEEWEALEHVAGDG 671
           +ALTY LEAQ+HGTKHIRD+PPP+HTVNVKRLPEKD+PGWGSNVPNLEEWEALE  AGDG
Sbjct: 135 LALTYTLEAQIHGTKHIRDAPPPIHTVNVKRLPEKDMPGWGSNVPNLEEWEALEQEAGDG 194


>ref|XP_002269627.2| PREDICTED: RNA-binding protein NOB1-like [Vitis vinifera]
          Length = 633

 Score =  271 bits (692), Expect = 1e-70
 Identities = 132/180 (73%), Positives = 149/180 (82%)
 Frame = +3

Query: 132 CWSNIVKQPPQSTSNEPTITQIASSVVARDCKSTKGIAMAVVDANAIIQGGEKLHNMAEK 311
           CWSNIVK  P    +      I  ++    CKS+KGI++AVVDA AIIQGGE+L   A+K
Sbjct: 10  CWSNIVKAQPPPKPHHHQQALIPPNLPVGSCKSSKGISIAVVDATAIIQGGEQLTRCADK 69

Query: 312 FVSVSEVIDEVRDPRSRHSLNILPFTVNTVEPSPDSLKKVINFARETGDLQTLSDVDLKL 491
           FVSVSEVIDEVRDP SRH L  +PFT++T+EPSP+SLKKVINFAR TGDLQTLSDVDLKL
Sbjct: 70  FVSVSEVIDEVRDPVSRHKLAFVPFTIDTMEPSPESLKKVINFARATGDLQTLSDVDLKL 129

Query: 492 IALTYMLEAQVHGTKHIRDSPPPMHTVNVKRLPEKDLPGWGSNVPNLEEWEALEHVAGDG 671
           IALTYMLEAQ+HGTKH+RDSPPP+H VNVKRLPEKD+PGWGSNVPNLEEWEALEH   DG
Sbjct: 130 IALTYMLEAQIHGTKHLRDSPPPIHAVNVKRLPEKDMPGWGSNVPNLEEWEALEHEVEDG 189


>emb|CBI34688.3| unnamed protein product [Vitis vinifera]
          Length = 560

 Score =  271 bits (692), Expect = 1e-70
 Identities = 132/180 (73%), Positives = 149/180 (82%)
 Frame = +3

Query: 132 CWSNIVKQPPQSTSNEPTITQIASSVVARDCKSTKGIAMAVVDANAIIQGGEKLHNMAEK 311
           CWSNIVK  P    +      I  ++    CKS+KGI++AVVDA AIIQGGE+L   A+K
Sbjct: 22  CWSNIVKAQPPPKPHHHQQALIPPNLPVGSCKSSKGISIAVVDATAIIQGGEQLTRCADK 81

Query: 312 FVSVSEVIDEVRDPRSRHSLNILPFTVNTVEPSPDSLKKVINFARETGDLQTLSDVDLKL 491
           FVSVSEVIDEVRDP SRH L  +PFT++T+EPSP+SLKKVINFAR TGDLQTLSDVDLKL
Sbjct: 82  FVSVSEVIDEVRDPVSRHKLAFVPFTIDTMEPSPESLKKVINFARATGDLQTLSDVDLKL 141

Query: 492 IALTYMLEAQVHGTKHIRDSPPPMHTVNVKRLPEKDLPGWGSNVPNLEEWEALEHVAGDG 671
           IALTYMLEAQ+HGTKH+RDSPPP+H VNVKRLPEKD+PGWGSNVPNLEEWEALEH   DG
Sbjct: 142 IALTYMLEAQIHGTKHLRDSPPPIHAVNVKRLPEKDMPGWGSNVPNLEEWEALEHEVEDG 201


>emb|CAN66411.1| hypothetical protein VITISV_020978 [Vitis vinifera]
          Length = 621

 Score =  267 bits (682), Expect = 2e-69
 Identities = 130/180 (72%), Positives = 148/180 (82%)
 Frame = +3

Query: 132 CWSNIVKQPPQSTSNEPTITQIASSVVARDCKSTKGIAMAVVDANAIIQGGEKLHNMAEK 311
           CWSNIVK  P    +      I  ++    CKS+KGI++AVVDA AIIQGGE+L   A+K
Sbjct: 10  CWSNIVKAQPPPKPHXHQQALIPPNLPVGSCKSSKGISIAVVDATAIIQGGEQLTRCADK 69

Query: 312 FVSVSEVIDEVRDPRSRHSLNILPFTVNTVEPSPDSLKKVINFARETGDLQTLSDVDLKL 491
           FVSVSEVIDEVRDP S H L  +PFT++T+EPSP+SLKKVINFAR TGDLQTLSDVDLKL
Sbjct: 70  FVSVSEVIDEVRDPVSXHKLAFVPFTIDTMEPSPESLKKVINFARATGDLQTLSDVDLKL 129

Query: 492 IALTYMLEAQVHGTKHIRDSPPPMHTVNVKRLPEKDLPGWGSNVPNLEEWEALEHVAGDG 671
           IALTYMLE+Q+HGTKH+RDSPPP+H VNVKRLPEKD+PGWGSNVPNLEEWEALEH   DG
Sbjct: 130 IALTYMLESQIHGTKHLRDSPPPIHAVNVKRLPEKDMPGWGSNVPNLEEWEALEHEVEDG 189


>ref|XP_002303575.1| predicted protein [Populus trichocarpa] gi|222841007|gb|EEE78554.1|
           predicted protein [Populus trichocarpa]
          Length = 588

 Score =  256 bits (653), Expect = 4e-66
 Identities = 125/180 (69%), Positives = 143/180 (79%)
 Frame = +3

Query: 132 CWSNIVKQPPQSTSNEPTITQIASSVVARDCKSTKGIAMAVVDANAIIQGGEKLHNMAEK 311
           CWSNIVK    S    P+  Q    +    CKST GI++AV+DANAIIQGGEKL+N A+K
Sbjct: 14  CWSNIVKNHQPSPPPAPSQQQ-QDQLYVESCKSTHGISVAVIDANAIIQGGEKLNNFADK 72

Query: 312 FVSVSEVIDEVRDPRSRHSLNILPFTVNTVEPSPDSLKKVINFARETGDLQTLSDVDLKL 491
           F +V EV+ E+RDP SRH L  +PF+++  EPSPDSL KVI FAR TGDLQTLSDVDLKL
Sbjct: 73  FFTVPEVLAEIRDPVSRHRLAFIPFSIDCREPSPDSLNKVIKFARATGDLQTLSDVDLKL 132

Query: 492 IALTYMLEAQVHGTKHIRDSPPPMHTVNVKRLPEKDLPGWGSNVPNLEEWEALEHVAGDG 671
           IALTY LE Q+HGTKHIRD+PPP+HTVNVKRLPEKD+PGWGSNVPNLEEWEALE   GDG
Sbjct: 133 IALTYTLETQLHGTKHIRDAPPPVHTVNVKRLPEKDMPGWGSNVPNLEEWEALEQETGDG 192


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