BLASTX nr result
ID: Bupleurum21_contig00012873
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00012873 (673 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002509778.1| RNA-binding protein nob1, putative [Ricinus ... 277 2e-72 ref|XP_002269627.2| PREDICTED: RNA-binding protein NOB1-like [Vi... 271 1e-70 emb|CBI34688.3| unnamed protein product [Vitis vinifera] 271 1e-70 emb|CAN66411.1| hypothetical protein VITISV_020978 [Vitis vinifera] 267 2e-69 ref|XP_002303575.1| predicted protein [Populus trichocarpa] gi|2... 256 4e-66 >ref|XP_002509778.1| RNA-binding protein nob1, putative [Ricinus communis] gi|223549677|gb|EEF51165.1| RNA-binding protein nob1, putative [Ricinus communis] Length = 628 Score = 277 bits (708), Expect = 2e-72 Identities = 127/180 (70%), Positives = 153/180 (85%) Frame = +3 Query: 132 CWSNIVKQPPQSTSNEPTITQIASSVVARDCKSTKGIAMAVVDANAIIQGGEKLHNMAEK 311 CWSNIVK PPQ +N+ + + CKS+KGI+MAV+DANA+I+GGEKLHN+A+K Sbjct: 15 CWSNIVKNPPQQPNNQNPSPNPTNQIFVESCKSSKGISMAVIDANAVIEGGEKLHNLADK 74 Query: 312 FVSVSEVIDEVRDPRSRHSLNILPFTVNTVEPSPDSLKKVINFARETGDLQTLSDVDLKL 491 FV+V EV+ E+RDP SRH L+ +PFT++++EPS D+L KVI FAR TGDLQTLSDVDLKL Sbjct: 75 FVTVPEVLAEIRDPVSRHRLSFVPFTIDSLEPSTDALNKVIKFARATGDLQTLSDVDLKL 134 Query: 492 IALTYMLEAQVHGTKHIRDSPPPMHTVNVKRLPEKDLPGWGSNVPNLEEWEALEHVAGDG 671 +ALTY LEAQ+HGTKHIRD+PPP+HTVNVKRLPEKD+PGWGSNVPNLEEWEALE AGDG Sbjct: 135 LALTYTLEAQIHGTKHIRDAPPPIHTVNVKRLPEKDMPGWGSNVPNLEEWEALEQEAGDG 194 >ref|XP_002269627.2| PREDICTED: RNA-binding protein NOB1-like [Vitis vinifera] Length = 633 Score = 271 bits (692), Expect = 1e-70 Identities = 132/180 (73%), Positives = 149/180 (82%) Frame = +3 Query: 132 CWSNIVKQPPQSTSNEPTITQIASSVVARDCKSTKGIAMAVVDANAIIQGGEKLHNMAEK 311 CWSNIVK P + I ++ CKS+KGI++AVVDA AIIQGGE+L A+K Sbjct: 10 CWSNIVKAQPPPKPHHHQQALIPPNLPVGSCKSSKGISIAVVDATAIIQGGEQLTRCADK 69 Query: 312 FVSVSEVIDEVRDPRSRHSLNILPFTVNTVEPSPDSLKKVINFARETGDLQTLSDVDLKL 491 FVSVSEVIDEVRDP SRH L +PFT++T+EPSP+SLKKVINFAR TGDLQTLSDVDLKL Sbjct: 70 FVSVSEVIDEVRDPVSRHKLAFVPFTIDTMEPSPESLKKVINFARATGDLQTLSDVDLKL 129 Query: 492 IALTYMLEAQVHGTKHIRDSPPPMHTVNVKRLPEKDLPGWGSNVPNLEEWEALEHVAGDG 671 IALTYMLEAQ+HGTKH+RDSPPP+H VNVKRLPEKD+PGWGSNVPNLEEWEALEH DG Sbjct: 130 IALTYMLEAQIHGTKHLRDSPPPIHAVNVKRLPEKDMPGWGSNVPNLEEWEALEHEVEDG 189 >emb|CBI34688.3| unnamed protein product [Vitis vinifera] Length = 560 Score = 271 bits (692), Expect = 1e-70 Identities = 132/180 (73%), Positives = 149/180 (82%) Frame = +3 Query: 132 CWSNIVKQPPQSTSNEPTITQIASSVVARDCKSTKGIAMAVVDANAIIQGGEKLHNMAEK 311 CWSNIVK P + I ++ CKS+KGI++AVVDA AIIQGGE+L A+K Sbjct: 22 CWSNIVKAQPPPKPHHHQQALIPPNLPVGSCKSSKGISIAVVDATAIIQGGEQLTRCADK 81 Query: 312 FVSVSEVIDEVRDPRSRHSLNILPFTVNTVEPSPDSLKKVINFARETGDLQTLSDVDLKL 491 FVSVSEVIDEVRDP SRH L +PFT++T+EPSP+SLKKVINFAR TGDLQTLSDVDLKL Sbjct: 82 FVSVSEVIDEVRDPVSRHKLAFVPFTIDTMEPSPESLKKVINFARATGDLQTLSDVDLKL 141 Query: 492 IALTYMLEAQVHGTKHIRDSPPPMHTVNVKRLPEKDLPGWGSNVPNLEEWEALEHVAGDG 671 IALTYMLEAQ+HGTKH+RDSPPP+H VNVKRLPEKD+PGWGSNVPNLEEWEALEH DG Sbjct: 142 IALTYMLEAQIHGTKHLRDSPPPIHAVNVKRLPEKDMPGWGSNVPNLEEWEALEHEVEDG 201 >emb|CAN66411.1| hypothetical protein VITISV_020978 [Vitis vinifera] Length = 621 Score = 267 bits (682), Expect = 2e-69 Identities = 130/180 (72%), Positives = 148/180 (82%) Frame = +3 Query: 132 CWSNIVKQPPQSTSNEPTITQIASSVVARDCKSTKGIAMAVVDANAIIQGGEKLHNMAEK 311 CWSNIVK P + I ++ CKS+KGI++AVVDA AIIQGGE+L A+K Sbjct: 10 CWSNIVKAQPPPKPHXHQQALIPPNLPVGSCKSSKGISIAVVDATAIIQGGEQLTRCADK 69 Query: 312 FVSVSEVIDEVRDPRSRHSLNILPFTVNTVEPSPDSLKKVINFARETGDLQTLSDVDLKL 491 FVSVSEVIDEVRDP S H L +PFT++T+EPSP+SLKKVINFAR TGDLQTLSDVDLKL Sbjct: 70 FVSVSEVIDEVRDPVSXHKLAFVPFTIDTMEPSPESLKKVINFARATGDLQTLSDVDLKL 129 Query: 492 IALTYMLEAQVHGTKHIRDSPPPMHTVNVKRLPEKDLPGWGSNVPNLEEWEALEHVAGDG 671 IALTYMLE+Q+HGTKH+RDSPPP+H VNVKRLPEKD+PGWGSNVPNLEEWEALEH DG Sbjct: 130 IALTYMLESQIHGTKHLRDSPPPIHAVNVKRLPEKDMPGWGSNVPNLEEWEALEHEVEDG 189 >ref|XP_002303575.1| predicted protein [Populus trichocarpa] gi|222841007|gb|EEE78554.1| predicted protein [Populus trichocarpa] Length = 588 Score = 256 bits (653), Expect = 4e-66 Identities = 125/180 (69%), Positives = 143/180 (79%) Frame = +3 Query: 132 CWSNIVKQPPQSTSNEPTITQIASSVVARDCKSTKGIAMAVVDANAIIQGGEKLHNMAEK 311 CWSNIVK S P+ Q + CKST GI++AV+DANAIIQGGEKL+N A+K Sbjct: 14 CWSNIVKNHQPSPPPAPSQQQ-QDQLYVESCKSTHGISVAVIDANAIIQGGEKLNNFADK 72 Query: 312 FVSVSEVIDEVRDPRSRHSLNILPFTVNTVEPSPDSLKKVINFARETGDLQTLSDVDLKL 491 F +V EV+ E+RDP SRH L +PF+++ EPSPDSL KVI FAR TGDLQTLSDVDLKL Sbjct: 73 FFTVPEVLAEIRDPVSRHRLAFIPFSIDCREPSPDSLNKVIKFARATGDLQTLSDVDLKL 132 Query: 492 IALTYMLEAQVHGTKHIRDSPPPMHTVNVKRLPEKDLPGWGSNVPNLEEWEALEHVAGDG 671 IALTY LE Q+HGTKHIRD+PPP+HTVNVKRLPEKD+PGWGSNVPNLEEWEALE GDG Sbjct: 133 IALTYTLETQLHGTKHIRDAPPPVHTVNVKRLPEKDMPGWGSNVPNLEEWEALEQETGDG 192