BLASTX nr result

ID: Bupleurum21_contig00012836 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012836
         (697 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC41681.1| mitotic cyclin [Petroselinum crispum]                   86   9e-15
dbj|BAE72072.1| Cyclin B1-4 [Daucus carota]                            73   5e-11
dbj|BAE72070.1| Cyclin B1-2 [Daucus carota]                            70   4e-10
dbj|BAA20411.1| B-type cyclin [Catharanthus roseus]                    64   3e-08
dbj|BAA20413.1| B-type cyclin [Catharanthus roseus]                    64   3e-08

>gb|AAC41681.1| mitotic cyclin [Petroselinum crispum]
          Length = 443

 Score = 85.5 bits (210), Expect = 9e-15
 Identities = 54/95 (56%), Positives = 57/95 (60%), Gaps = 8/95 (8%)
 Frame = -1

Query: 301 MASRPVLQLQQNRAEXXXXXXXALKQKNMAGVEGRNRRALGDIGNL--------GNHLIP 146
           MAS PV+Q  QNR E        +KQKNMA VEGRNRRALGDIGNL            IP
Sbjct: 1   MASIPVVQ--QNRVEAAGGGA--VKQKNMAAVEGRNRRALGDIGNLVTGHGIEGKQQQIP 56

Query: 145 QVSRPLTRSFCXXXXXXXXXXAVENNKKQRAIVND 41
           QVSRP+TR FC           VENNKKQRAIV D
Sbjct: 57  QVSRPVTRGFCAQLLANAQAGVVENNKKQRAIVGD 91


>dbj|BAE72072.1| Cyclin B1-4 [Daucus carota]
          Length = 455

 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 52/95 (54%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
 Frame = -1

Query: 301 MASRPVLQLQQNRAEXXXXXXXALKQKNMAGVEGRNRRALGDIGNL--------GNHLIP 146
           MASRP + LQQNR          +K KNMAG E RNRRALGDIGNL            IP
Sbjct: 1   MASRPAV-LQQNREAAGGA----VKPKNMAGGEVRNRRALGDIGNLVTVRGIDGKKQPIP 55

Query: 145 QVSRPLTRSFCXXXXXXXXXXAVENNKKQRAIVND 41
           Q SRP+TRSFC          AVE NKKQRAIV D
Sbjct: 56  QASRPVTRSFC--AQLLANAQAVEKNKKQRAIVGD 88


>dbj|BAE72070.1| Cyclin B1-2 [Daucus carota]
          Length = 456

 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 47/94 (50%), Positives = 53/94 (56%), Gaps = 8/94 (8%)
 Frame = -1

Query: 298 ASRPVLQLQQNRAEXXXXXXXALKQKNMAGVEGRNRRALGDIGNLGNHL--------IPQ 143
           ++RPV+Q Q +R E         KQK MA  EGRNRRALGDIGNL            +PQ
Sbjct: 3   STRPVVQ-QNHREEAAPVAGGGGKQKKMAA-EGRNRRALGDIGNLVTARGGIDAVKPLPQ 60

Query: 142 VSRPLTRSFCXXXXXXXXXXAVENNKKQRAIVND 41
           VSRP+TRSFC          A ENNKKQ AI  D
Sbjct: 61  VSRPITRSFCAQLLANAQAAAAENNKKQMAIPGD 94


>dbj|BAA20411.1| B-type cyclin [Catharanthus roseus]
          Length = 436

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 47/92 (51%), Positives = 56/92 (60%), Gaps = 8/92 (8%)
 Frame = -1

Query: 301 MASRPVLQL-QQNRAEXXXXXXXALKQKNMAGVEGRNRRALGDIGNL------GNHLIPQ 143
           MA+R V+Q+ QQNR          +KQKNMAG EG+ RRALGDIGNL          +PQ
Sbjct: 1   MATRNVVQVPQQNR----DAAPAGMKQKNMAG-EGKIRRALGDIGNLVTVRGVEGKPLPQ 55

Query: 142 VSRPLTRSFCXXXXXXXXXXAV-ENNKKQRAI 50
           VSRP+TRSFC          AV ENNKK +A+
Sbjct: 56  VSRPITRSFCAQLLANAQAAAVAENNKKCKAV 87


>dbj|BAA20413.1| B-type cyclin [Catharanthus roseus]
          Length = 186

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 47/92 (51%), Positives = 56/92 (60%), Gaps = 8/92 (8%)
 Frame = -1

Query: 301 MASRPVLQL-QQNRAEXXXXXXXALKQKNMAGVEGRNRRALGDIGNL------GNHLIPQ 143
           MA+R V+Q+ QQNR          +KQKNMAG EG+ RRALGDIGNL          +PQ
Sbjct: 1   MATRNVVQVPQQNR----DAAPAGMKQKNMAG-EGKIRRALGDIGNLVTVRGVEGKPLPQ 55

Query: 142 VSRPLTRSFCXXXXXXXXXXAV-ENNKKQRAI 50
           VSRP+TRSFC          AV ENNKK +A+
Sbjct: 56  VSRPITRSFCAQLLANAQAAAVAENNKKCKAV 87


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