BLASTX nr result

ID: Bupleurum21_contig00012788 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012788
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26674.3| unnamed protein product [Vitis vinifera]               62   5e-08
ref|XP_002278757.1| PREDICTED: cell differentiation protein RCD1...    62   5e-08
ref|XP_002278722.1| PREDICTED: cell differentiation protein RCD1...    62   5e-08
ref|XP_003532138.1| PREDICTED: cell differentiation protein RCD1...    62   6e-08
ref|XP_002317325.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07

>emb|CBI26674.3| unnamed protein product [Vitis vinifera]
          Length = 285

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/40 (77%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
 Frame = -1

Query: 354 SNSLREDPTTRRWLQQLLINVQGPRV-AMQAGGGFEHMMV 238
           S+ LREDPTTRRWLQQLL NV G RV A QAGGGF+HM+V
Sbjct: 245 SSCLREDPTTRRWLQQLLHNVGGSRVAAFQAGGGFDHMLV 284


>ref|XP_002278757.1| PREDICTED: cell differentiation protein RCD1 homolog isoform 2
           [Vitis vinifera]
          Length = 319

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/40 (77%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
 Frame = -1

Query: 354 SNSLREDPTTRRWLQQLLINVQGPRV-AMQAGGGFEHMMV 238
           S+ LREDPTTRRWLQQLL NV G RV A QAGGGF+HM+V
Sbjct: 279 SSCLREDPTTRRWLQQLLHNVGGSRVAAFQAGGGFDHMLV 318


>ref|XP_002278722.1| PREDICTED: cell differentiation protein RCD1 homolog isoform 1
           [Vitis vinifera]
          Length = 319

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/40 (77%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
 Frame = -1

Query: 354 SNSLREDPTTRRWLQQLLINVQGPRV-AMQAGGGFEHMMV 238
           S+ LREDPTTRRWLQQLL NV G RV A QAGGGF+HM+V
Sbjct: 279 SSCLREDPTTRRWLQQLLHNVGGSRVAAFQAGGGFDHMLV 318


>ref|XP_003532138.1| PREDICTED: cell differentiation protein RCD1 homolog [Glycine max]
          Length = 325

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/40 (77%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
 Frame = -1

Query: 354 SNSLREDPTTRRWLQQLLINVQGPRV-AMQAGGGFEHMMV 238
           S  LREDPTTRRWLQQLL NV G RV A+QAGGGF+HM+V
Sbjct: 285 STCLREDPTTRRWLQQLLHNVGGNRVPALQAGGGFDHMIV 324


>ref|XP_002317325.1| predicted protein [Populus trichocarpa] gi|222860390|gb|EEE97937.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/40 (75%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
 Frame = -1

Query: 354 SNSLREDPTTRRWLQQLLINVQGPRV-AMQAGGGFEHMMV 238
           S+ LREDPTTRRWLQQLL NV G RV  +QAGGGF+HM+V
Sbjct: 280 SSCLREDPTTRRWLQQLLHNVGGNRVPGLQAGGGFDHMLV 319


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