BLASTX nr result

ID: Bupleurum21_contig00012784 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012784
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB82024.1| TIR-NBS disease resistance-like protein [Populus ...    62   5e-08
ref|XP_002334897.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002325275.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_002338998.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
gb|ABB82031.1| TIR-NBS disease resistance-like protein [Populus ...    60   2e-07

>gb|ABB82024.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 1078

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 52/158 (32%), Positives = 70/158 (44%), Gaps = 26/158 (16%)
 Frame = +2

Query: 8    LFERMPNLKLLEIIGVPHIQGSFVNCFHELRCIRWHHCPWTQLPSDFSPQKLVSFDMQAS 187
            LF  M  L LL+I GV H+ GSF     EL  I WH CP    PSDF+   L   DMQ S
Sbjct: 590  LFAEMKCLNLLQINGV-HLTGSFKLLSKELMWICWHRCPLKDFPSDFTADYLAVLDMQYS 648

Query: 188  KLQMLWKDITLLGSSKL-------------------AEKLVFCGYKIF---HPSIAWMGG 301
             L+ LWK   +L   K+                    EKL+  G       H SI     
Sbjct: 649  NLKELWKGKKILNRLKIFNLSHSRNLVKTPNLHSSSLEKLILKGCSSLVEVHQSIGHSTS 708

Query: 302  YV-MNLKQYYLPK---NNIKLLTNLSSLDLAHCSDLKR 403
             V +NLK  +  K    +I+ + +L ++ +  CS L++
Sbjct: 709  LVFLNLKGCWSLKTLPESIRNVKSLETMKIYGCSQLEK 746


>ref|XP_002334897.1| predicted protein [Populus trichocarpa] gi|222832146|gb|EEE70623.1|
           predicted protein [Populus trichocarpa]
          Length = 738

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 51/157 (32%), Positives = 69/157 (43%), Gaps = 26/157 (16%)
 Frame = +2

Query: 11  FERMPNLKLLEIIGVPHIQGSFVNCFHELRCIRWHHCPWTQLPSDFSPQKLVSFDMQASK 190
           F  M  L LL+I GV H+ GSF     EL  I WH CP    PSDF+   L   DMQ S 
Sbjct: 162 FAEMKRLNLLQINGV-HLTGSFKLLSKELMWICWHRCPLKDFPSDFTADYLAVLDMQYSN 220

Query: 191 LQMLWKDITLLGSSKL-------------------AEKLVFCGYKIF---HPSIAWMGGY 304
           L+ LWK   +L   K+                    EKL+  G       H SI      
Sbjct: 221 LKELWKGKKILNRLKIFNLSHSRNLVKTPNLHSSSLEKLILKGCSSLVEVHQSIGHSTSL 280

Query: 305 V-MNLKQYYLPK---NNIKLLTNLSSLDLAHCSDLKR 403
           V +NLK  +  K    +I+ + +L ++ +  CS L++
Sbjct: 281 VFLNLKGCWSLKTLPESIRNVKSLETMKIYGCSQLEK 317


>ref|XP_002325275.1| predicted protein [Populus trichocarpa] gi|222862150|gb|EEE99656.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 50/154 (32%), Positives = 72/154 (46%), Gaps = 26/154 (16%)
 Frame = +2

Query: 20  MPNLKLLEIIGVPHIQGSFVNCFHELRCIRWHHCPWTQLPSDFSPQKLVSFDMQASKLQM 199
           M  L LL+I G  H+ GSF     EL  I WH CP   LPSDF+ + LV  D+Q S L+ 
Sbjct: 1   MKRLTLLQINGA-HLTGSFKLLSKELMWICWHECPLKYLPSDFTLENLVVLDIQYSNLKE 59

Query: 200 LWKDITLLGSSKLAE---------------------KLVFCGYKI-FHPSIAWMGGYV-M 310
           LWK   +L   K+ +                     KL  C   +  H SI  +   V +
Sbjct: 60  LWKGEKILNKLKILDLSHSHNLIKTPNLHSSSLEKLKLEGCSSLVEVHQSIENLTSLVFL 119

Query: 311 NLKQYYLPKN---NIKLLTNLSSLDLAHCSDLKR 403
           N+K  +  KN    I  + +L +L+++ CS L++
Sbjct: 120 NMKGCWRLKNLPERIGNVKSLKTLNISGCSQLEK 153


>ref|XP_002338998.1| predicted protein [Populus trichocarpa] gi|222874187|gb|EEF11318.1|
           predicted protein [Populus trichocarpa]
          Length = 274

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/78 (43%), Positives = 43/78 (55%)
 Frame = +2

Query: 11  FERMPNLKLLEIIGVPHIQGSFVNCFHELRCIRWHHCPWTQLPSDFSPQKLVSFDMQASK 190
           F  M  L LL+I GV H+ GSF     EL  I WH CP    PS+F+   LV  DMQ S 
Sbjct: 25  FAEMKFLNLLQINGV-HLTGSFKLLSKELMWICWHECPLKYFPSNFTLDNLVVLDMQHSN 83

Query: 191 LQMLWKDITLLGSSKLAE 244
           L+ LWK+  +L   K+ +
Sbjct: 84  LKELWKEKKMLDKLKILD 101


>gb|ABB82031.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 1146

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 53/161 (32%), Positives = 74/161 (45%), Gaps = 27/161 (16%)
 Frame = +2

Query: 2    TNLFERMPNLKLLEIIGVPHIQGSFVNCFHELRCIRWHHCPWTQLPSDFSPQKLVSFDMQ 181
            T  F +M  L LL+I G  H+ GSF     EL  I W  CP    PSDF+   LV  DMQ
Sbjct: 588  TGSFAKMKRLNLLQINGA-HLTGSFKLLSKELMWICWLQCPSKYFPSDFTLDNLVVLDMQ 646

Query: 182  ASKLQMLWKDITLLGSSKL-------------------AEKLVFCGYKIF---HPSIAWM 295
             S L+ LWK   +L   K+                    EKL+  G       H SI  +
Sbjct: 647  YSNLKELWKGKKILNRLKIINLSHSQHLIKTPNLHSSSLEKLILKGCSSLVDVHQSIGNL 706

Query: 296  GGYV-MNLKQYY----LPKNNIKLLTNLSSLDLAHCSDLKR 403
               V +NL+  +    LPK +I  + +L +L+++ CS L++
Sbjct: 707  TSLVFLNLEGCWSLKILPK-SIGNVKSLETLNISGCSQLEK 746


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