BLASTX nr result

ID: Bupleurum21_contig00012776 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012776
         (1074 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282986.1| PREDICTED: uncharacterized protein LOC100267...   258   2e-66
emb|CAN61027.1| hypothetical protein VITISV_001147 [Vitis vinifera]   258   2e-66
ref|XP_002510168.1| conserved hypothetical protein [Ricinus comm...   238   1e-65
ref|XP_002327175.1| predicted protein [Populus trichocarpa] gi|2...   239   9e-61
ref|XP_004141390.1| PREDICTED: transcription factor LHW-like [Cu...   227   3e-57

>ref|XP_002282986.1| PREDICTED: uncharacterized protein LOC100267842 [Vitis vinifera]
           gi|302142275|emb|CBI19478.3| unnamed protein product
           [Vitis vinifera]
          Length = 380

 Score =  258 bits (658), Expect = 2e-66
 Identities = 121/143 (84%), Positives = 131/143 (91%)
 Frame = +3

Query: 3   ILVWEDGFCDFCECERAGNGYVKGRFGADVFFKMSHEVYNYGEGLIGKVAADNSHKWVFS 182
           ILVWEDGFCDF ECERAG  Y+KGRFGADVFFKMSHEVYNYGEGL+GKVAADNSHKWVF 
Sbjct: 67  ILVWEDGFCDFYECERAGGEYMKGRFGADVFFKMSHEVYNYGEGLVGKVAADNSHKWVFR 126

Query: 183 DSPNENDPCFSSSWTASIDIQPRAWEVQFSSGIQTIAVISVREGIVQLGSLDKMVEDLNL 362
           +SPNENDP F SSW  SID QPRAWE QF+SGIQTIA+ISVREGI+QLGS DKMVEDLNL
Sbjct: 127 ESPNENDPGFISSWNVSIDPQPRAWEFQFNSGIQTIAIISVREGIIQLGSFDKMVEDLNL 186

Query: 363 VTSIQRKFNYLQSIPGIYAMQRP 431
           V SIQRKF+YLQSIPGI+++QRP
Sbjct: 187 VISIQRKFSYLQSIPGIFSIQRP 209


>emb|CAN61027.1| hypothetical protein VITISV_001147 [Vitis vinifera]
          Length = 387

 Score =  258 bits (658), Expect = 2e-66
 Identities = 121/143 (84%), Positives = 131/143 (91%)
 Frame = +3

Query: 3   ILVWEDGFCDFCECERAGNGYVKGRFGADVFFKMSHEVYNYGEGLIGKVAADNSHKWVFS 182
           ILVWEDGFCDF ECERAG  Y+KGRFGADVFFKMSHEVYNYGEGL+GKVAADNSHKWVF 
Sbjct: 74  ILVWEDGFCDFYECERAGGEYMKGRFGADVFFKMSHEVYNYGEGLVGKVAADNSHKWVFR 133

Query: 183 DSPNENDPCFSSSWTASIDIQPRAWEVQFSSGIQTIAVISVREGIVQLGSLDKMVEDLNL 362
           +SPNENDP F SSW  SID QPRAWE QF+SGIQTIA+ISVREGI+QLGS DKMVEDLNL
Sbjct: 134 ESPNENDPGFISSWNVSIDPQPRAWEFQFNSGIQTIAIISVREGIIQLGSFDKMVEDLNL 193

Query: 363 VTSIQRKFNYLQSIPGIYAMQRP 431
           V SIQRKF+YLQSIPGI+++QRP
Sbjct: 194 VISIQRKFSYLQSIPGIFSIQRP 216


>ref|XP_002510168.1| conserved hypothetical protein [Ricinus communis]
           gi|223550869|gb|EEF52355.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 369

 Score =  238 bits (607), Expect(2) = 1e-65
 Identities = 109/143 (76%), Positives = 127/143 (88%)
 Frame = +3

Query: 3   ILVWEDGFCDFCECERAGNGYVKGRFGADVFFKMSHEVYNYGEGLIGKVAADNSHKWVFS 182
           ILVWEDGFCD  ECE+AG+GY+KGRFG+ VFFKMSHEVYNYGEGL+GKVAADNSHKWV  
Sbjct: 67  ILVWEDGFCDLFECEKAGSGYMKGRFGSYVFFKMSHEVYNYGEGLVGKVAADNSHKWVLK 126

Query: 183 DSPNENDPCFSSSWTASIDIQPRAWEVQFSSGIQTIAVISVREGIVQLGSLDKMVEDLNL 362
            + +ENDP F SSW  SI+ QPRAWE QF+SGIQTIA+ISVREGI+QLGS DK+ EDLNL
Sbjct: 127 KTSSENDPDFISSWNMSIEPQPRAWEFQFNSGIQTIAIISVREGIIQLGSFDKIAEDLNL 186

Query: 363 VTSIQRKFNYLQSIPGIYAMQRP 431
           V ++QRKF+YLQSIPG++A+QRP
Sbjct: 187 VINVQRKFSYLQSIPGVFAIQRP 209



 Score = 39.3 bits (90), Expect(2) = 1e-65
 Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 6/113 (5%)
 Frame = +2

Query: 473 MIESSEAAFNINDN-CQLRGLKTLYRERQVEKPLNNSMNFSYISTQNAMVRXXXXXXXXX 649
           M+ES E  F+I+DN  Q+   K L+ ER  + P+  S++  + + QN +           
Sbjct: 225 MVESQETTFSIDDNKHQIIREKRLFDERFDDNPI-KSISLGWNNPQNGIA--GAPIWSIP 281

Query: 650 XXXXXXXYNVRALSSKLPLHTPSTYNATVAFEN-----NRRNSISQSIKFDDC 793
                   ++ AL SKLP   PS+  +  AF+      N  N  SQS K D C
Sbjct: 282 TLLPTMSCSLGALLSKLPSVVPSSCGSIEAFDTALVNCNNSNRRSQSSKVDTC 334


>ref|XP_002327175.1| predicted protein [Populus trichocarpa] gi|222835490|gb|EEE73925.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score =  239 bits (610), Expect = 9e-61
 Identities = 111/137 (81%), Positives = 123/137 (89%)
 Frame = +3

Query: 3   ILVWEDGFCDFCECERAGNGYVKGRFGADVFFKMSHEVYNYGEGLIGKVAADNSHKWVFS 182
           ILVWEDGFCD  ECERAG GY+KGRFG DVFFKMSHEVYNYGEGL+GKVAADNSHKWVF 
Sbjct: 57  ILVWEDGFCDVYECERAGTGYMKGRFGTDVFFKMSHEVYNYGEGLVGKVAADNSHKWVFK 116

Query: 183 DSPNENDPCFSSSWTASIDIQPRAWEVQFSSGIQTIAVISVREGIVQLGSLDKMVEDLNL 362
           ++PNE+DP   SSW  SI+ QPRAWE QF+SGIQTIA+ISVREG++QLGS DK+VEDLNL
Sbjct: 117 ENPNESDPNLISSWNMSIEPQPRAWEFQFNSGIQTIAIISVREGVIQLGSFDKIVEDLNL 176

Query: 363 VTSIQRKFNYLQSIPGI 413
           V SIQRKF+YLQSIPGI
Sbjct: 177 VISIQRKFSYLQSIPGI 193


>ref|XP_004141390.1| PREDICTED: transcription factor LHW-like [Cucumis sativus]
           gi|449515101|ref|XP_004164588.1| PREDICTED:
           transcription factor LHW-like [Cucumis sativus]
          Length = 375

 Score =  227 bits (579), Expect = 3e-57
 Identities = 104/143 (72%), Positives = 122/143 (85%)
 Frame = +3

Query: 3   ILVWEDGFCDFCECERAGNGYVKGRFGADVFFKMSHEVYNYGEGLIGKVAADNSHKWVFS 182
           ILVWEDGFCDF EC+RA  G + GRFG D+FFKMSHEVY+YGEGL+GKV ADNSHKWVF 
Sbjct: 69  ILVWEDGFCDFHECQRAAGGCITGRFGVDLFFKMSHEVYSYGEGLVGKVGADNSHKWVFR 128

Query: 183 DSPNENDPCFSSSWTASIDIQPRAWEVQFSSGIQTIAVISVREGIVQLGSLDKMVEDLNL 362
           D+  E+DP   SSW +SI+ QPRAWE QF SGIQTIAVI+VREG+VQLGS DK+ EDLNL
Sbjct: 129 DNTTESDPNLISSWNSSIEPQPRAWESQFKSGIQTIAVIAVREGVVQLGSFDKVPEDLNL 188

Query: 363 VTSIQRKFNYLQSIPGIYAMQRP 431
           V ++QRKF+YL S+PGI+A+QRP
Sbjct: 189 VINVQRKFSYLHSVPGIFAVQRP 211


Top