BLASTX nr result

ID: Bupleurum21_contig00012760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012760
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37896.3| unnamed protein product [Vitis vinifera]               99   3e-19
ref|XP_002532700.1| conserved hypothetical protein [Ricinus comm...    92   3e-17
ref|XP_002305504.1| predicted protein [Populus trichocarpa] gi|2...    87   2e-15
gb|AFK47882.1| unknown [Lotus japonicus]                               84   2e-14

>emb|CBI37896.3| unnamed protein product [Vitis vinifera]
          Length = 297

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 51/89 (57%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
 Frame = +1

Query: 85  MSLTQCGLIGLRKS-WTSSHDECLLELLIEQKNFGKTTCNLFKYEVYKTVTQKLNHKFGT 261
           MS TQ G++G  K+ WT S D  L+EL IEQ N G+T  N FK EVYK+VT   N KFG 
Sbjct: 1   MSATQDGILGRPKAEWTPSRDAYLVELFIEQHNCGRTAYNEFKVEVYKSVTNDFNRKFGM 60

Query: 262 NVEESHIKLRHNAMKKDYGIIKSLLCQSG 348
           N+EE+ IK R+N MKKDYGI+K+LL   G
Sbjct: 61  NLEENQIKNRYNVMKKDYGIVKTLLSHPG 89


>ref|XP_002532700.1| conserved hypothetical protein [Ricinus communis]
           gi|223527567|gb|EEF29685.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 324

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 47/89 (52%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
 Frame = +1

Query: 85  MSLTQCGLIGLRKS-WTSSHDECLLELLIEQKNFGKTTCNLFKYEVYKTVTQKLNHKFGT 261
           MS  Q G++G  K+ WT + D  L+EL IEQ N G+T  N FK EV K+VT+  N  FG 
Sbjct: 1   MSAAQDGILGRPKAEWTPTRDAYLVELFIEQHNCGRTAYNEFKNEVIKSVTRDFNKNFGM 60

Query: 262 NVEESHIKLRHNAMKKDYGIIKSLLCQSG 348
           N+EE+ IK R+N MKKDYG++K+LL  SG
Sbjct: 61  NLEENQIKNRYNVMKKDYGVVKTLLSHSG 89


>ref|XP_002305504.1| predicted protein [Populus trichocarpa] gi|222848468|gb|EEE86015.1|
           predicted protein [Populus trichocarpa]
          Length = 296

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 43/89 (48%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
 Frame = +1

Query: 85  MSLTQCGLIGLRKS-WTSSHDECLLELLIEQKNFGKTTCNLFKYEVYKTVTQKLNHKFGT 261
           MS TQ  ++G  K+ WT + D  L+EL I+Q N G+T  N FK E+ ++VT+  N +F  
Sbjct: 1   MSATQDVILGRPKAEWTPTRDAYLVELFIDQHNCGRTAYNEFKNEMIRSVTRDFNKRFSM 60

Query: 262 NVEESHIKLRHNAMKKDYGIIKSLLCQSG 348
           N+EES +K R+N MKKDYG++K+LL  SG
Sbjct: 61  NLEESQVKNRYNVMKKDYGVVKTLLTHSG 89


>gb|AFK47882.1| unknown [Lotus japonicus]
          Length = 293

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 41/78 (52%), Positives = 53/78 (67%)
 Frame = +1

Query: 103 GLIGLRKSWTSSHDECLLELLIEQKNFGKTTCNLFKYEVYKTVTQKLNHKFGTNVEESHI 282
           GL   +  WT + D  ++ELLIEQ   G+T  N FK EV K+VT   N KFG N+EE+ I
Sbjct: 8   GLSRPKAEWTPTRDAYMVELLIEQHKSGRTAYNEFKNEVIKSVTWDFNKKFGLNLEENQI 67

Query: 283 KLRHNAMKKDYGIIKSLL 336
           K R+N MKKDYG++K+LL
Sbjct: 68  KNRYNVMKKDYGVVKTLL 85


Top