BLASTX nr result

ID: Bupleurum21_contig00012753 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012753
         (553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633834.1| PREDICTED: uncharacterized protein LOC100252...    82   6e-14
emb|CBI34963.3| unnamed protein product [Vitis vinifera]               82   6e-14
emb|CAN82134.1| hypothetical protein VITISV_002644 [Vitis vinifera]    82   6e-14
ref|XP_003554849.1| PREDICTED: uncharacterized protein LOC100796...    78   8e-13
ref|NP_190388.2| BAH and TFIIS domain-containing protein [Arabid...    76   4e-12

>ref|XP_003633834.1| PREDICTED: uncharacterized protein LOC100252575 [Vitis vinifera]
          Length = 1656

 Score = 82.0 bits (201), Expect = 6e-14
 Identities = 45/76 (59%), Positives = 52/76 (68%)
 Frame = -1

Query: 232 GRKGELKSLHSRHMLPVSVSVKTSIVDSGLAPVTSDSFVKDGRKISVGDCALFKPPKDSP 53
           GR+GE K    RHM PV     T++     AP    SF KDGR ISVGDCALFKPP+DSP
Sbjct: 3   GREGE-KRQQRRHMWPVPPH--TAVASDSAAPY---SFCKDGRTISVGDCALFKPPQDSP 56

Query: 52  PFVGIIRKLIVSKEDS 5
           PF+GIIR+L V KED+
Sbjct: 57  PFIGIIRRLTVGKEDN 72


>emb|CBI34963.3| unnamed protein product [Vitis vinifera]
          Length = 1049

 Score = 82.0 bits (201), Expect = 6e-14
 Identities = 45/76 (59%), Positives = 52/76 (68%)
 Frame = -1

Query: 232 GRKGELKSLHSRHMLPVSVSVKTSIVDSGLAPVTSDSFVKDGRKISVGDCALFKPPKDSP 53
           GR+GE K    RHM PV     T++     AP    SF KDGR ISVGDCALFKPP+DSP
Sbjct: 3   GREGE-KRQQRRHMWPVPPH--TAVASDSAAPY---SFCKDGRTISVGDCALFKPPQDSP 56

Query: 52  PFVGIIRKLIVSKEDS 5
           PF+GIIR+L V KED+
Sbjct: 57  PFIGIIRRLTVGKEDN 72


>emb|CAN82134.1| hypothetical protein VITISV_002644 [Vitis vinifera]
          Length = 1961

 Score = 82.0 bits (201), Expect = 6e-14
 Identities = 45/76 (59%), Positives = 52/76 (68%)
 Frame = -1

Query: 232 GRKGELKSLHSRHMLPVSVSVKTSIVDSGLAPVTSDSFVKDGRKISVGDCALFKPPKDSP 53
           GR+GE K    RHM PV     T++     AP    SF KDGR ISVGDCALFKPP+DSP
Sbjct: 3   GREGE-KRQQRRHMWPVPPH--TAVASDSAAPY---SFCKDGRTISVGDCALFKPPQDSP 56

Query: 52  PFVGIIRKLIVSKEDS 5
           PF+GIIR+L V KED+
Sbjct: 57  PFIGIIRRLTVGKEDN 72


>ref|XP_003554849.1| PREDICTED: uncharacterized protein LOC100796021, partial [Glycine
           max]
          Length = 1564

 Score = 78.2 bits (191), Expect = 8e-13
 Identities = 40/73 (54%), Positives = 47/73 (64%)
 Frame = -1

Query: 223 GELKSLHSRHMLPVSVSVKTSIVDSGLAPVTSDSFVKDGRKISVGDCALFKPPKDSPPFV 44
           G  +S H+RHM PV  +  T  +D    P  S    KDGRKI  GDCALFK P+DSPPF+
Sbjct: 5   GRDQSKHNRHMWPVPANATTVAID----PSPSQFKCKDGRKIRAGDCALFKAPRDSPPFI 60

Query: 43  GIIRKLIVSKEDS 5
           GIIRKL   KE+S
Sbjct: 61  GIIRKLTFDKEES 73


>ref|NP_190388.2| BAH and TFIIS domain-containing protein [Arabidopsis thaliana]
           gi|186510770|ref|NP_850669.2| BAH and TFIIS
           domain-containing protein [Arabidopsis thaliana]
           gi|332644839|gb|AEE78360.1| BAH and TFIIS
           domain-containing protein [Arabidopsis thaliana]
           gi|332644840|gb|AEE78361.1| BAH and TFIIS
           domain-containing protein [Arabidopsis thaliana]
          Length = 1613

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 40/69 (57%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
 Frame = -1

Query: 199 RHMLPVSVSVKTSIVDSG---LAPVTSDSFVKDGRKISVGDCALFKPPKDSPPFVGIIRK 29
           RHML  S  V  ++   G   L+  +S SF KDGRKISVGDCALFKPP+D PPF+GIIR 
Sbjct: 15  RHMLISSSRVIATVEGGGSSCLSLSSSTSFSKDGRKISVGDCALFKPPQDCPPFIGIIRL 74

Query: 28  LIVSKEDSL 2
           +I  +ED L
Sbjct: 75  IIAEEEDKL 83