BLASTX nr result

ID: Bupleurum21_contig00012720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012720
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P55141.1|PHYA_PETCR RecName: Full=Phytochrome A gi|556667|emb...   171   4e-41
sp|P06592.1|PHYA_CUCPE RecName: Full=Phytochrome A gi|167501|gb|...   156   2e-36
gb|ACC60969.1| phytochrome A [Vitis riparia]                          155   2e-36
ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera] g...   155   2e-36
gb|AAO86644.1| PHYA3 photoreceptor [Stellaria longipes]               154   6e-36

>sp|P55141.1|PHYA_PETCR RecName: Full=Phytochrome A gi|556667|emb|CAA53165.1| phytochrome A
            [Petroselinum crispum]
          Length = 1129

 Score =  171 bits (434), Expect = 4e-41
 Identities = 79/88 (89%), Positives = 82/88 (93%)
 Frame = -3

Query: 264  VTSQKYIMDKFTRIQGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNQAMAELSGWHREEVE 85
            VTSQK IMDKFTRIQGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNQAM ELSGW RE+V 
Sbjct: 739  VTSQKTIMDKFTRIQGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNQAMTELSGWRREDVM 798

Query: 84   NKMLLGEIFGVQTSCCRLNSKQAFVNLG 1
            NKMLLGEIFG+QTSCC L SK+AFVNLG
Sbjct: 799  NKMLLGEIFGIQTSCCHLKSKEAFVNLG 826


>sp|P06592.1|PHYA_CUCPE RecName: Full=Phytochrome A gi|167501|gb|AAA33115.1| phytochrome
           [Cucurbita pepo] gi|225435|prf||1303260A phytochrome
          Length = 1124

 Score =  156 bits (394), Expect = 2e-36
 Identities = 68/88 (77%), Positives = 80/88 (90%)
 Frame = -3

Query: 264 VTSQKYIMDKFTRIQGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNQAMAELSGWHREEVE 85
           +T QK +MDKFTR++GDYKAIVQNPNPLIPPIFG+DEFGWCSEWN AMA+L+GW REEV 
Sbjct: 733 ITGQKMVMDKFTRLEGDYKAIVQNPNPLIPPIFGSDEFGWCSEWNPAMAKLTGWSREEVI 792

Query: 84  NKMLLGEIFGVQTSCCRLNSKQAFVNLG 1
           +KMLLGE+FGV  SCCRL +++AFVNLG
Sbjct: 793 DKMLLGEVFGVHKSCCRLKNQEAFVNLG 820


>gb|ACC60969.1| phytochrome A [Vitis riparia]
          Length = 1124

 Score =  155 bits (393), Expect = 2e-36
 Identities = 68/88 (77%), Positives = 79/88 (89%)
 Frame = -3

Query: 264 VTSQKYIMDKFTRIQGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNQAMAELSGWHREEVE 85
           +TSQK +MDKFTRI+GDYKAIVQNPNPLIPPIFGTDEFGWCSEWN AM +LSGW+REEV 
Sbjct: 733 ITSQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMVKLSGWNREEVM 792

Query: 84  NKMLLGEIFGVQTSCCRLNSKQAFVNLG 1
           +KMLLGE+FG   +CCRL +++AFV LG
Sbjct: 793 DKMLLGEVFGTHMACCRLKNREAFVGLG 820


>ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera]
           gi|147838424|emb|CAN76586.1| hypothetical protein
           VITISV_020287 [Vitis vinifera]
           gi|183239014|gb|ACC60965.1| phytochrome A [Vitis
           vinifera] gi|296089871|emb|CBI39690.3| unnamed protein
           product [Vitis vinifera]
          Length = 1124

 Score =  155 bits (393), Expect = 2e-36
 Identities = 68/88 (77%), Positives = 79/88 (89%)
 Frame = -3

Query: 264 VTSQKYIMDKFTRIQGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNQAMAELSGWHREEVE 85
           +TSQK +MDKFTRI+GDYKAIVQNPNPLIPPIFGTDEFGWCSEWN AM +LSGW+REEV 
Sbjct: 733 ITSQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMVKLSGWNREEVM 792

Query: 84  NKMLLGEIFGVQTSCCRLNSKQAFVNLG 1
           +KMLLGE+FG   +CCRL +++AFV LG
Sbjct: 793 DKMLLGEVFGTHMACCRLKNREAFVGLG 820


>gb|AAO86644.1| PHYA3 photoreceptor [Stellaria longipes]
          Length = 1123

 Score =  154 bits (390), Expect = 6e-36
 Identities = 67/88 (76%), Positives = 79/88 (89%)
 Frame = -3

Query: 264 VTSQKYIMDKFTRIQGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNQAMAELSGWHREEVE 85
           +T QK +MDKFTRI+GDYKAI+Q+PNPLIPPIFGTDEFGWCSEWN AMA+L+GW REEV 
Sbjct: 733 ITGQKTVMDKFTRIEGDYKAIIQSPNPLIPPIFGTDEFGWCSEWNPAMAKLTGWSREEVI 792

Query: 84  NKMLLGEIFGVQTSCCRLNSKQAFVNLG 1
           +KMLLGE+FG Q SCCRL +++AFVN G
Sbjct: 793 DKMLLGEVFGTQKSCCRLKNQEAFVNFG 820


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