BLASTX nr result

ID: Bupleurum21_contig00012713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012713
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315923.1| predicted protein [Populus trichocarpa] gi|2...   116   1e-39
gb|ABK93171.1| unknown [Populus trichocarpa]                          115   4e-39
ref|XP_002315924.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-39
ref|XP_002527022.1| conserved hypothetical protein [Ricinus comm...   117   1e-37
ref|XP_002279807.2| PREDICTED: uncharacterized protein LOC100256...   123   1e-36

>ref|XP_002315923.1| predicted protein [Populus trichocarpa] gi|222864963|gb|EEF02094.1|
           predicted protein [Populus trichocarpa]
          Length = 396

 Score =  116 bits (291), Expect(2) = 1e-39
 Identities = 55/70 (78%), Positives = 59/70 (84%)
 Frame = -3

Query: 211 QEGFSSDEGESGKARDFLLFEYLERDPPFGREPLADKISDLALRFPDLKSLRSCDLRPSS 32
           +E FSSDEGES   +  LLFEYLERDPP+ REPLADKI DLA RFP+LK LRSCDL PSS
Sbjct: 220 KEDFSSDEGESVNCQGCLLFEYLERDPPYSREPLADKILDLAFRFPELKMLRSCDLLPSS 279

Query: 31  WISVAWYPIY 2
           WISVAWYPIY
Sbjct: 280 WISVAWYPIY 289



 Score = 71.6 bits (174), Expect(2) = 1e-39
 Identities = 36/65 (55%), Positives = 46/65 (70%)
 Frame = -1

Query: 480 SKSAAGTRRPGEDSDLEFRDSSSDGSSDYEHDRSCTNCLREQRNYNHPTGGVLQRVEHLS 301
           +K    +RR GEDSD +FRDSSSDGSSDYEH+R    C R+Q N++H T     R++ LS
Sbjct: 153 TKMPPKSRRLGEDSDSDFRDSSSDGSSDYEHERG-VKCSRDQLNHHHVTDDFPLRIDRLS 211

Query: 300 LRDQN 286
           LRDQ+
Sbjct: 212 LRDQH 216


>gb|ABK93171.1| unknown [Populus trichocarpa]
          Length = 396

 Score =  115 bits (287), Expect(2) = 4e-39
 Identities = 54/70 (77%), Positives = 58/70 (82%)
 Frame = -3

Query: 211 QEGFSSDEGESGKARDFLLFEYLERDPPFGREPLADKISDLALRFPDLKSLRSCDLRPSS 32
           +E FS DEGES   +  LLFEYLERDPP+ REPLADKI DLA RFP+LK LRSCDL PSS
Sbjct: 220 KEDFSGDEGESVNCQGCLLFEYLERDPPYSREPLADKILDLAFRFPELKMLRSCDLLPSS 279

Query: 31  WISVAWYPIY 2
           WISVAWYPIY
Sbjct: 280 WISVAWYPIY 289



 Score = 71.6 bits (174), Expect(2) = 4e-39
 Identities = 36/65 (55%), Positives = 46/65 (70%)
 Frame = -1

Query: 480 SKSAAGTRRPGEDSDLEFRDSSSDGSSDYEHDRSCTNCLREQRNYNHPTGGVLQRVEHLS 301
           +K    +RR GEDSD +FRDSSSDGSSDYEH+R    C R+Q N++H T     R++ LS
Sbjct: 153 TKMPPKSRRLGEDSDSDFRDSSSDGSSDYEHERG-VKCSRDQLNHHHVTDDFPLRIDRLS 211

Query: 300 LRDQN 286
           LRDQ+
Sbjct: 212 LRDQH 216


>ref|XP_002315924.1| predicted protein [Populus trichocarpa] gi|222864964|gb|EEF02095.1|
           predicted protein [Populus trichocarpa]
          Length = 316

 Score =  115 bits (287), Expect(2) = 4e-39
 Identities = 54/70 (77%), Positives = 58/70 (82%)
 Frame = -3

Query: 211 QEGFSSDEGESGKARDFLLFEYLERDPPFGREPLADKISDLALRFPDLKSLRSCDLRPSS 32
           +E FS DEGES   +  LLFEYLERDPP+ REPLADKI DLA RFP+LK LRSCDL PSS
Sbjct: 220 KEDFSGDEGESVNCQGCLLFEYLERDPPYSREPLADKILDLAFRFPELKMLRSCDLLPSS 279

Query: 31  WISVAWYPIY 2
           WISVAWYPIY
Sbjct: 280 WISVAWYPIY 289



 Score = 71.6 bits (174), Expect(2) = 4e-39
 Identities = 36/65 (55%), Positives = 46/65 (70%)
 Frame = -1

Query: 480 SKSAAGTRRPGEDSDLEFRDSSSDGSSDYEHDRSCTNCLREQRNYNHPTGGVLQRVEHLS 301
           +K    +RR GEDSD +FRDSSSDGSSDYEH+R    C R+Q N++H T     R++ LS
Sbjct: 153 TKMPPKSRRLGEDSDSDFRDSSSDGSSDYEHERG-VKCSRDQLNHHHVTDDFPLRIDRLS 211

Query: 300 LRDQN 286
           LRDQ+
Sbjct: 212 LRDQH 216


>ref|XP_002527022.1| conserved hypothetical protein [Ricinus communis]
           gi|223533657|gb|EEF35394.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 419

 Score =  117 bits (293), Expect(2) = 1e-37
 Identities = 55/70 (78%), Positives = 60/70 (85%)
 Frame = -3

Query: 211 QEGFSSDEGESGKARDFLLFEYLERDPPFGREPLADKISDLALRFPDLKSLRSCDLRPSS 32
           QE FSSD+GES  ++  LLFEY ERDPP+GREPLADKISDLAL FP LK+LRSCDL  SS
Sbjct: 247 QEDFSSDDGESSNSQGRLLFEYFERDPPYGREPLADKISDLALEFPGLKTLRSCDLLSSS 306

Query: 31  WISVAWYPIY 2
           WISVAWYPIY
Sbjct: 307 WISVAWYPIY 316



 Score = 63.9 bits (154), Expect(2) = 1e-37
 Identities = 35/66 (53%), Positives = 45/66 (68%)
 Frame = -1

Query: 480 SKSAAGTRRPGEDSDLEFRDSSSDGSSDYEHDRSCTNCLREQRNYNHPTGGVLQRVEHLS 301
           +K+   +RR GEDSD +FRDSSSDGSSD E +R  T   R+Q N+ H   GV  R++ LS
Sbjct: 180 TKTCDKSRRLGEDSDSDFRDSSSDGSSDCEPERGLTGS-RKQWNHQHVANGVPLRMDRLS 238

Query: 300 LRDQNN 283
           LRD +N
Sbjct: 239 LRDCHN 244


>ref|XP_002279807.2| PREDICTED: uncharacterized protein LOC100256001 [Vitis vinifera]
           gi|297737778|emb|CBI26979.3| unnamed protein product
           [Vitis vinifera]
          Length = 383

 Score =  123 bits (308), Expect(2) = 1e-36
 Identities = 56/70 (80%), Positives = 62/70 (88%)
 Frame = -3

Query: 211 QEGFSSDEGESGKARDFLLFEYLERDPPFGREPLADKISDLALRFPDLKSLRSCDLRPSS 32
           QE FSSD+ ESG +R  LLFEYLE DPP+GREPLADKISDLA RFP+LK+LRSCDL PSS
Sbjct: 221 QEDFSSDDSESGNSRGCLLFEYLEHDPPYGREPLADKISDLAFRFPELKTLRSCDLLPSS 280

Query: 31  WISVAWYPIY 2
           W+SVAWYPIY
Sbjct: 281 WVSVAWYPIY 290



 Score = 55.1 bits (131), Expect(2) = 1e-36
 Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
 Frame = -1

Query: 477 KSAAGTRRPGEDSDLE-FRDSSSDGSSDYEHDRSCTNCLREQRNYNHPTGGVLQRVEHLS 301
           KS+  +RRPGE+SD + FRDSSSDGSSD E DR      REQ+NY H T  V  R+  LS
Sbjct: 159 KSSVKSRRPGEESDGDNFRDSSSDGSSDCELDRG-LKFSREQQNY-HVTSDVPLRIVGLS 216

Query: 300 LRD 292
           L D
Sbjct: 217 LTD 219


Top