BLASTX nr result

ID: Bupleurum21_contig00012712 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012712
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147115.1| PREDICTED: uncharacterized protein LOC101217...   162   3e-38
ref|XP_002315923.1| predicted protein [Populus trichocarpa] gi|2...   157   8e-37
gb|ABK93171.1| unknown [Populus trichocarpa]                          157   8e-37
emb|CBI15490.3| unnamed protein product [Vitis vinifera]              155   2e-36
ref|XP_002279248.1| PREDICTED: uncharacterized protein LOC100244...   155   2e-36

>ref|XP_004147115.1| PREDICTED: uncharacterized protein LOC101217142 [Cucumis sativus]
           gi|449520992|ref|XP_004167516.1| PREDICTED:
           uncharacterized LOC101217142 [Cucumis sativus]
          Length = 409

 Score =  162 bits (410), Expect = 3e-38
 Identities = 90/137 (65%), Positives = 98/137 (71%), Gaps = 4/137 (2%)
 Frame = -3

Query: 405 ISDLSRRFPELKSLRSCDLHPSSWISVAWYPIYRIPMGPTLKDLDACFLTFHPLSTPMTD 226
           ISDL+ +FPELK+LRSCDL PSSW SVAWYPIYRIP GPTLKDLDACFLTFH LS+P+  
Sbjct: 274 ISDLAFQFPELKTLRSCDLLPSSWFSVAWYPIYRIPTGPTLKDLDACFLTFHYLSSPIGG 333

Query: 225 NPSTXXXXXXXXAVVTYPSEIDGVPRMSLPVFGFASYKFILSLWTENG----QLVSSLLQ 58
             S          VVTYPSEIDGVP+MSLPVFG ASYKF  SLWT NG    QL +SLLQ
Sbjct: 334 ARSV------QCPVVTYPSEIDGVPKMSLPVFGLASYKFRGSLWTPNGGYEWQLANSLLQ 387

Query: 57  ALESLTLPRLSQEHDPD 7
             E     R  Q + PD
Sbjct: 388 DAEDWLRER--QVNHPD 402


>ref|XP_002315923.1| predicted protein [Populus trichocarpa] gi|222864963|gb|EEF02094.1|
           predicted protein [Populus trichocarpa]
          Length = 396

 Score =  157 bits (397), Expect = 8e-37
 Identities = 86/137 (62%), Positives = 95/137 (69%), Gaps = 4/137 (2%)
 Frame = -3

Query: 405 ISDLSRRFPELKSLRSCDLHPSSWISVAWYPIYRIPMGPTLKDLDACFLTFHPLSTPMTD 226
           I DL+ RFPELK LRSCDL PSSWISVAWYPIYRIP GPTLKDLDACFLT+H L T    
Sbjct: 257 ILDLAFRFPELKMLRSCDLLPSSWISVAWYPIYRIPTGPTLKDLDACFLTYHSLHT---- 312

Query: 225 NPSTXXXXXXXXAVVTYPSEIDGVPRMSLPVFGFASYKFILSLWTENG----QLVSSLLQ 58
             S          ++TYPSE DG+P++SLPVFGFASYKF  SLWT NG    QL +SLLQ
Sbjct: 313 --SLGGGRVAQAPLMTYPSEADGMPKISLPVFGFASYKFKGSLWTSNGGGDRQLANSLLQ 370

Query: 57  ALESLTLPRLSQEHDPD 7
           A       RL Q + PD
Sbjct: 371 AASKFL--RLLQVNHPD 385


>gb|ABK93171.1| unknown [Populus trichocarpa]
          Length = 396

 Score =  157 bits (397), Expect = 8e-37
 Identities = 86/137 (62%), Positives = 95/137 (69%), Gaps = 4/137 (2%)
 Frame = -3

Query: 405 ISDLSRRFPELKSLRSCDLHPSSWISVAWYPIYRIPMGPTLKDLDACFLTFHPLSTPMTD 226
           I DL+ RFPELK LRSCDL PSSWISVAWYPIYRIP GPTLKDLDACFLT+H L T    
Sbjct: 257 ILDLAFRFPELKMLRSCDLLPSSWISVAWYPIYRIPTGPTLKDLDACFLTYHSLHT---- 312

Query: 225 NPSTXXXXXXXXAVVTYPSEIDGVPRMSLPVFGFASYKFILSLWTENG----QLVSSLLQ 58
             S          ++TYPSE DG+P++SLPVFGFASYKF  SLWT NG    QL +SLLQ
Sbjct: 313 --SLGGGRVAQAPLMTYPSEADGMPKISLPVFGFASYKFKGSLWTSNGGGDRQLANSLLQ 370

Query: 57  ALESLTLPRLSQEHDPD 7
           A       RL Q + PD
Sbjct: 371 AASKFL--RLLQVNHPD 385


>emb|CBI15490.3| unnamed protein product [Vitis vinifera]
          Length = 367

 Score =  155 bits (393), Expect = 2e-36
 Identities = 82/137 (59%), Positives = 101/137 (73%), Gaps = 4/137 (2%)
 Frame = -3

Query: 405 ISDLSRRFPELKSLRSCDLHPSSWISVAWYPIYRIPMGPTLKDLDACFLTFHPLSTPMTD 226
           I DL+R +PELK+LRSCDL P SW+SVAWYPIYRIPMG TL+DLDACFLT+H LSTPM D
Sbjct: 227 ILDLAREYPELKTLRSCDLLPVSWMSVAWYPIYRIPMGQTLRDLDACFLTYHSLSTPMKD 286

Query: 225 NPSTXXXXXXXXAVVTYPSEIDGVPRMSLPVFGFASYKFILSLWTENG----QLVSSLLQ 58
             ST        AV  YPSE++G+P++SLPVFG ASYKF  S+W +NG    Q V+SL+Q
Sbjct: 287 GGST------QAAVEVYPSEMEGIPKISLPVFGMASYKFKGSIWRQNGTCEHQRVNSLVQ 340

Query: 57  ALESLTLPRLSQEHDPD 7
           A ++    RL + + PD
Sbjct: 341 AADNRL--RLLEVNHPD 355


>ref|XP_002279248.1| PREDICTED: uncharacterized protein LOC100244012 [Vitis vinifera]
          Length = 409

 Score =  155 bits (393), Expect = 2e-36
 Identities = 82/137 (59%), Positives = 101/137 (73%), Gaps = 4/137 (2%)
 Frame = -3

Query: 405 ISDLSRRFPELKSLRSCDLHPSSWISVAWYPIYRIPMGPTLKDLDACFLTFHPLSTPMTD 226
           I DL+R +PELK+LRSCDL P SW+SVAWYPIYRIPMG TL+DLDACFLT+H LSTPM D
Sbjct: 269 ILDLAREYPELKTLRSCDLLPVSWMSVAWYPIYRIPMGQTLRDLDACFLTYHSLSTPMKD 328

Query: 225 NPSTXXXXXXXXAVVTYPSEIDGVPRMSLPVFGFASYKFILSLWTENG----QLVSSLLQ 58
             ST        AV  YPSE++G+P++SLPVFG ASYKF  S+W +NG    Q V+SL+Q
Sbjct: 329 GGST------QAAVEVYPSEMEGIPKISLPVFGMASYKFKGSIWRQNGTCEHQRVNSLVQ 382

Query: 57  ALESLTLPRLSQEHDPD 7
           A ++    RL + + PD
Sbjct: 383 AADNRL--RLLEVNHPD 397


Top