BLASTX nr result
ID: Bupleurum21_contig00012710
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00012710
(1486 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P55141.1|PHYA_PETCR RecName: Full=Phytochrome A gi|556667|emb... 886 0.0
gb|ACC60969.1| phytochrome A [Vitis riparia] 832 0.0
ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera] g... 832 0.0
gb|ABA46868.1| phytochrome A [Solanum tuberosum] 826 0.0
ref|NP_001234490.1| alternative transcript type 3 [Solanum lycop... 818 0.0
>sp|P55141.1|PHYA_PETCR RecName: Full=Phytochrome A gi|556667|emb|CAA53165.1| phytochrome A
[Petroselinum crispum]
Length = 1129
Score = 886 bits (2289), Expect = 0.0
Identities = 439/494 (88%), Positives = 463/494 (93%)
Frame = -3
Query: 1484 LASKAVNRLQSLPGGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVIAEVTKPGLE 1305
LASKAVNRLQ+LPGGSMERLCDTMVQEVFELTGYDR MAYKFHDDDHGEV AEVTKPGLE
Sbjct: 202 LASKAVNRLQALPGGSMERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVTAEVTKPGLE 261
Query: 1304 PYLGLHYPATDIPQASRFLFLKNKVRMICDCRAKHVQVLQDEKLPFELTLCGSTLRAPHS 1125
PY GLHYPATD+PQA+RFLFLKNKVRMICDCRA VLQDEKLPFELTLCGSTLRAPHS
Sbjct: 262 PYFGLHYPATDVPQAARFLFLKNKVRMICDCRANSAPVLQDEKLPFELTLCGSTLRAPHS 321
Query: 1124 CHSQYMENMNSIASLVLAVVINDSDEVGESSNPNSVKSKKLWGLVVCHNTSPRFVPFPLR 945
CH QYMENMNSIASLV+AVVINDSDEV ESS+ NSVKSKKLWGLVVCHNTSPRFVPFPLR
Sbjct: 322 CHLQYMENMNSIASLVMAVVINDSDEVVESSDRNSVKSKKLWGLVVCHNTSPRFVPFPLR 381
Query: 944 YACEFLAQVFSIHVSKELELETQILEKNILRTQTLLCDLLMRDAPLGIMSQSPNMMDLVK 765
YACEFLAQVF+IHVSKELELE QI+EKNILRTQTLLCDLLMRDAPLGI+SQSPNMMDLVK
Sbjct: 382 YACEFLAQVFAIHVSKELELENQIVEKNILRTQTLLCDLLMRDAPLGIVSQSPNMMDLVK 441
Query: 764 CDGAALLYKNKVYRLGATPSDYHIKDIVSWLTEYHMDSTGLSTDSLYDAGFPGALALGDV 585
CDGAALLYKNKVYRLGATPSDY ++DIVSWLTEYH DSTGLSTDSLYDAG+PGALALGDV
Sbjct: 442 CDGAALLYKNKVYRLGATPSDYQLRDIVSWLTEYHTDSTGLSTDSLYDAGYPGALALGDV 501
Query: 584 VCGMAVVKITSHDMLFWFRSHAAANIRWGGAKHEPDEQDDGRKMHPRSSFKAFLEVFKTR 405
VCGMAVVKITSHDMLFWFRSHAA +IRWGGAK EPDE DGRKMHPRSSFKAFLEV KTR
Sbjct: 502 VCGMAVVKITSHDMLFWFRSHAAGHIRWGGAKAEPDENHDGRKMHPRSSFKAFLEVVKTR 561
Query: 404 SSTWKDFEMDAIHSLQLILRKALSDENAVVPKDDETRTNTNSIHTKLNDLKIDGIQELEA 225
S+TWK+FEMDAIHSLQLILRKALS E AV + DE R+NT+ IHTKLNDLKI+GIQELEA
Sbjct: 562 STTWKEFEMDAIHSLQLILRKALSVEKAVAAQGDEIRSNTDVIHTKLNDLKIEGIQELEA 621
Query: 224 VTSEMVRLIETATVPIFAVDADQIVNGWNTKIAELTGLPVDKATGKHLVTLVEDSSVDIV 45
VTSEMVRLIETATVPIFAVDAD+IVNGWNTKIAELTGLPVD+A GKHL+TLVEDSSV V
Sbjct: 622 VTSEMVRLIETATVPIFAVDADEIVNGWNTKIAELTGLPVDQAMGKHLLTLVEDSSVGTV 681
Query: 44 EKMLSFALQGREEQ 3
+L+ ALQG+EEQ
Sbjct: 682 VFLLALALQGKEEQ 695
>gb|ACC60969.1| phytochrome A [Vitis riparia]
Length = 1124
Score = 832 bits (2150), Expect = 0.0
Identities = 406/495 (82%), Positives = 445/495 (89%), Gaps = 1/495 (0%)
Frame = -3
Query: 1484 LASKAVNRLQSLPGGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVIAEVTKPGLE 1305
LA+KA+ RLQSLP GS+ERLCDTMVQEVFELTGYDR MAYKFHDDDHGEV++E+TKPGLE
Sbjct: 202 LAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVSEITKPGLE 261
Query: 1304 PYLGLHYPATDIPQASRFLFLKNKVRMICDCRAKHVQVLQDEKLPFELTLCGSTLRAPHS 1125
PYLGLHYPATDIPQA+RFLF+KNKVRMICDCRAKH+QVLQDEKLPF+LTLCGSTLRAPHS
Sbjct: 262 PYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQVLQDEKLPFDLTLCGSTLRAPHS 321
Query: 1124 CHSQYMENMNSIASLVLAVVINDSDEVGESSNPNSV-KSKKLWGLVVCHNTSPRFVPFPL 948
CH QYMENMNSIASLV+AVV+ND DE GESSN K K+LWGLVVCH+T+PRFVPFPL
Sbjct: 322 CHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQPQKRKRLWGLVVCHHTTPRFVPFPL 381
Query: 947 RYACEFLAQVFSIHVSKELELETQILEKNILRTQTLLCDLLMRDAPLGIMSQSPNMMDLV 768
RYACEFLAQVF+IHV+KELELE+QILEKNILRTQTLLCD+LMRDAPLGI+SQSPN+MDLV
Sbjct: 382 RYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRDAPLGIVSQSPNVMDLV 441
Query: 767 KCDGAALLYKNKVYRLGATPSDYHIKDIVSWLTEYHMDSTGLSTDSLYDAGFPGALALGD 588
KCDGAALLYKNKV+RLG TPSD+ + DI SWL+EYHMDSTGLSTDSLYDAG+PGALALGD
Sbjct: 442 KCDGAALLYKNKVWRLGITPSDFQLHDICSWLSEYHMDSTGLSTDSLYDAGYPGALALGD 501
Query: 587 VVCGMAVVKITSHDMLFWFRSHAAANIRWGGAKHEPDEQDDGRKMHPRSSFKAFLEVFKT 408
VCGMA VKITS D LFWFRSH AA +RWGGAKHEP E+DDGRKMHPRSSFKAFLEV KT
Sbjct: 502 AVCGMAAVKITSKDTLFWFRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKT 561
Query: 407 RSSTWKDFEMDAIHSLQLILRKALSDENAVVPKDDETRTNTNSIHTKLNDLKIDGIQELE 228
RS WKD+EMDAIHSLQLILR A D A+ NTN+IHTKLNDLKI+G+QELE
Sbjct: 562 RSLPWKDYEMDAIHSLQLILRNAFKDSEAM-------DVNTNAIHTKLNDLKIEGMQELE 614
Query: 227 AVTSEMVRLIETATVPIFAVDADQIVNGWNTKIAELTGLPVDKATGKHLVTLVEDSSVDI 48
AVTSEMVRLIETA+VPI AVD D +VNGWNTKI+ELT LPVDKA G HL+TLVEDSS D
Sbjct: 615 AVTSEMVRLIETASVPILAVDVDGLVNGWNTKISELTSLPVDKAIGMHLLTLVEDSSADT 674
Query: 47 VEKMLSFALQGREEQ 3
V+KML ALQG+EEQ
Sbjct: 675 VKKMLHLALQGQEEQ 689
>ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera]
gi|147838424|emb|CAN76586.1| hypothetical protein
VITISV_020287 [Vitis vinifera]
gi|183239014|gb|ACC60965.1| phytochrome A [Vitis
vinifera] gi|296089871|emb|CBI39690.3| unnamed protein
product [Vitis vinifera]
Length = 1124
Score = 832 bits (2150), Expect = 0.0
Identities = 406/495 (82%), Positives = 445/495 (89%), Gaps = 1/495 (0%)
Frame = -3
Query: 1484 LASKAVNRLQSLPGGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVIAEVTKPGLE 1305
LA+KA+ RLQSLP GS+ERLCDTMVQEVFELTGYDR MAYKFHDDDHGEV++E+TKPGLE
Sbjct: 202 LAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVSEITKPGLE 261
Query: 1304 PYLGLHYPATDIPQASRFLFLKNKVRMICDCRAKHVQVLQDEKLPFELTLCGSTLRAPHS 1125
PYLGLHYPATDIPQA+RFLF+KNKVRMICDCRAKH+QVLQDEKLPF+LTLCGSTLRAPHS
Sbjct: 262 PYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQVLQDEKLPFDLTLCGSTLRAPHS 321
Query: 1124 CHSQYMENMNSIASLVLAVVINDSDEVGESSNPNSV-KSKKLWGLVVCHNTSPRFVPFPL 948
CH QYMENMNSIASLV+AVV+ND DE GESSN K K+LWGLVVCH+T+PRFVPFPL
Sbjct: 322 CHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQPQKRKRLWGLVVCHHTTPRFVPFPL 381
Query: 947 RYACEFLAQVFSIHVSKELELETQILEKNILRTQTLLCDLLMRDAPLGIMSQSPNMMDLV 768
RYACEFLAQVF+IHV+KELELE+QILEKNILRTQTLLCD+LMRDAPLGI+SQSPN+MDLV
Sbjct: 382 RYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRDAPLGIVSQSPNVMDLV 441
Query: 767 KCDGAALLYKNKVYRLGATPSDYHIKDIVSWLTEYHMDSTGLSTDSLYDAGFPGALALGD 588
KCDGAALLYKNKV+RLG TPSD+ + DI SWL+EYHMDSTGLSTDSLYDAG+PGALALGD
Sbjct: 442 KCDGAALLYKNKVWRLGITPSDFQLHDICSWLSEYHMDSTGLSTDSLYDAGYPGALALGD 501
Query: 587 VVCGMAVVKITSHDMLFWFRSHAAANIRWGGAKHEPDEQDDGRKMHPRSSFKAFLEVFKT 408
VCGMA VKITS D LFWFRSH AA +RWGGAKHEP E+DDGRKMHPRSSFKAFLEV KT
Sbjct: 502 AVCGMAAVKITSKDTLFWFRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKT 561
Query: 407 RSSTWKDFEMDAIHSLQLILRKALSDENAVVPKDDETRTNTNSIHTKLNDLKIDGIQELE 228
RS WKD+EMDAIHSLQLILR A D A+ NTN+IHTKLNDLKI+G+QELE
Sbjct: 562 RSLPWKDYEMDAIHSLQLILRNAFKDSEAM-------DVNTNAIHTKLNDLKIEGMQELE 614
Query: 227 AVTSEMVRLIETATVPIFAVDADQIVNGWNTKIAELTGLPVDKATGKHLVTLVEDSSVDI 48
AVTSEMVRLIETA+VPI AVD D +VNGWNTKI+ELT LPVDKA G HL+TLVEDSS D
Sbjct: 615 AVTSEMVRLIETASVPILAVDVDGLVNGWNTKISELTSLPVDKAIGMHLLTLVEDSSADT 674
Query: 47 VEKMLSFALQGREEQ 3
V+KML ALQG+EEQ
Sbjct: 675 VKKMLHLALQGQEEQ 689
>gb|ABA46868.1| phytochrome A [Solanum tuberosum]
Length = 1123
Score = 826 bits (2134), Expect = 0.0
Identities = 400/495 (80%), Positives = 444/495 (89%), Gaps = 1/495 (0%)
Frame = -3
Query: 1484 LASKAVNRLQSLPGGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVIAEVTKPGLE 1305
LA+KA+ RLQSLP GSMERLCDTMVQEVFELTGYDR M YKFHDDDHGEV++E+TKPGLE
Sbjct: 203 LAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGYKFHDDDHGEVVSEITKPGLE 262
Query: 1304 PYLGLHYPATDIPQASRFLFLKNKVRMICDCRAKHVQVLQDEKLPFELTLCGSTLRAPHS 1125
PYLGLHYPATDIPQA+RFLF+KNKVRMICDCRAKHV+V+QDEKLPF+LTLCGSTLRAPH
Sbjct: 263 PYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLCGSTLRAPHY 322
Query: 1124 CHSQYMENMNSIASLVLAVVINDSDEVGESSNPN-SVKSKKLWGLVVCHNTSPRFVPFPL 948
CH QYMENMNS+ASLV+AVV+ND DE GESS+ + S K K+LWGLVVCHNT+PRFVPFPL
Sbjct: 323 CHLQYMENMNSVASLVMAVVVNDGDEEGESSDSSQSQKRKRLWGLVVCHNTTPRFVPFPL 382
Query: 947 RYACEFLAQVFSIHVSKELELETQILEKNILRTQTLLCDLLMRDAPLGIMSQSPNMMDLV 768
RYACEFLAQVF+IHV+KELELE Q LEKNILRTQTLLCD+LMRDAPLGI+SQSPN+MDLV
Sbjct: 383 RYACEFLAQVFAIHVNKELELENQFLEKNILRTQTLLCDMLMRDAPLGIVSQSPNIMDLV 442
Query: 767 KCDGAALLYKNKVYRLGATPSDYHIKDIVSWLTEYHMDSTGLSTDSLYDAGFPGALALGD 588
KCDGAALLYKNK++RLG PSD+ + DIVSWL EYH DSTGLSTDSLYDAGFPGALALGD
Sbjct: 443 KCDGAALLYKNKIHRLGMNPSDFQLHDIVSWLCEYHTDSTGLSTDSLYDAGFPGALALGD 502
Query: 587 VVCGMAVVKITSHDMLFWFRSHAAANIRWGGAKHEPDEQDDGRKMHPRSSFKAFLEVFKT 408
VCGMA V+I+ D LFW+RSH AA +RWGGAKHEP E+DDGRKMHPRSSFKAFLEV KT
Sbjct: 503 AVCGMAAVRISDKDWLFWYRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKT 562
Query: 407 RSSTWKDFEMDAIHSLQLILRKALSDENAVVPKDDETRTNTNSIHTKLNDLKIDGIQELE 228
RS WKD+EMDAIHSLQLILR A D +AV +NTNSIHTKLNDL+IDG+QELE
Sbjct: 563 RSIPWKDYEMDAIHSLQLILRNAFKDADAV-------NSNTNSIHTKLNDLRIDGMQELE 615
Query: 227 AVTSEMVRLIETATVPIFAVDADQIVNGWNTKIAELTGLPVDKATGKHLVTLVEDSSVDI 48
AVT+EM+RLIETA+VPIFAVD D VNGWNTK+AELTGLPVD+A GKHL+TLVEDSSVD
Sbjct: 616 AVTAEMIRLIETASVPIFAVDVDGQVNGWNTKVAELTGLPVDEAIGKHLLTLVEDSSVDT 675
Query: 47 VEKMLSFALQGREEQ 3
V KML ALQG+EE+
Sbjct: 676 VNKMLELALQGKEER 690
>ref|NP_001234490.1| alternative transcript type 3 [Solanum lycopersicum]
gi|3492795|emb|CAA05086.1| phyA [Solanum lycopersicum]
gi|3492797|emb|CAA05087.1| phyA [Solanum lycopersicum]
gi|3492799|emb|CAA05088.1| phyA [Solanum lycopersicum]
gi|3492801|emb|CAA05089.1| phyA [Solanum lycopersicum]
Length = 1123
Score = 818 bits (2113), Expect = 0.0
Identities = 399/495 (80%), Positives = 440/495 (88%), Gaps = 1/495 (0%)
Frame = -3
Query: 1484 LASKAVNRLQSLPGGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVIAEVTKPGLE 1305
LA+KA+ RLQSLP GSMERLCDTMVQEVFELTGYDR M YKFH+DDHGEV++E+TKPGLE
Sbjct: 203 LAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGYKFHEDDHGEVVSEITKPGLE 262
Query: 1304 PYLGLHYPATDIPQASRFLFLKNKVRMICDCRAKHVQVLQDEKLPFELTLCGSTLRAPHS 1125
PYLGLHYPATDIPQA+RFLF+KNKVRMICDCRAKHV+V+QDEKLPF+LTLCGSTLRAPH
Sbjct: 263 PYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLCGSTLRAPHY 322
Query: 1124 CHSQYMENMNSIASLVLAVVINDSDEVGESSNPN-SVKSKKLWGLVVCHNTSPRFVPFPL 948
CH QYMENMNSIASLV+AVV+ND DE GESS+ + S K K+LWGLVVCHNT+PRFVPFPL
Sbjct: 323 CHLQYMENMNSIASLVMAVVVNDGDEEGESSDSSQSQKRKRLWGLVVCHNTTPRFVPFPL 382
Query: 947 RYACEFLAQVFSIHVSKELELETQILEKNILRTQTLLCDLLMRDAPLGIMSQSPNMMDLV 768
RYACEFLAQVF+IHV+KELELE Q LEKNILRTQTLLCD+LMRDAPLGI+SQSPN+MDLV
Sbjct: 383 RYACEFLAQVFAIHVNKELELENQFLEKNILRTQTLLCDMLMRDAPLGIVSQSPNIMDLV 442
Query: 767 KCDGAALLYKNKVYRLGATPSDYHIKDIVSWLTEYHMDSTGLSTDSLYDAGFPGALALGD 588
KCDGAALLYKNK++RLG PSD+ ++DIVSWL EYH DSTGLSTDSLYDAGFPGALALGD
Sbjct: 443 KCDGAALLYKNKIHRLGMNPSDFQLQDIVSWLCEYHTDSTGLSTDSLYDAGFPGALALGD 502
Query: 587 VVCGMAVVKITSHDMLFWFRSHAAANIRWGGAKHEPDEQDDGRKMHPRSSFKAFLEVFKT 408
VCGMA V+I+ D LFWFRSH AA +RWGGAKHEP E+DDGRKMHPRSSFKAFLEV KT
Sbjct: 503 AVCGMAAVRISDKDWLFWFRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKT 562
Query: 407 RSSTWKDFEMDAIHSLQLILRKALSDENAVVPKDDETRTNTNSIHTKLNDLKIDGIQELE 228
RS WKD+EMDAIHSLQLILR A D V +NTNSI+ KLNDLKIDG+QELE
Sbjct: 563 RSIPWKDYEMDAIHSLQLILRNAFKDAEVV-------NSNTNSIYKKLNDLKIDGMQELE 615
Query: 227 AVTSEMVRLIETATVPIFAVDADQIVNGWNTKIAELTGLPVDKATGKHLVTLVEDSSVDI 48
+VT+EMVRLIETA VPI AVD D VNGWNTKIAELTGLPVD+A GKHL+TLVEDSSVD
Sbjct: 616 SVTAEMVRLIETALVPILAVDVDGQVNGWNTKIAELTGLPVDEAIGKHLLTLVEDSSVDT 675
Query: 47 VEKMLSFALQGREEQ 3
V KML ALQG+EE+
Sbjct: 676 VNKMLELALQGKEEK 690