BLASTX nr result
ID: Bupleurum21_contig00012701
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00012701
(1515 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002529205.1| dead box ATP-dependent RNA helicase, putativ... 721 0.0
emb|CBI15398.3| unnamed protein product [Vitis vinifera] 715 0.0
ref|XP_002275026.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 715 0.0
ref|XP_002298317.1| predicted protein [Populus trichocarpa] gi|2... 711 0.0
ref|XP_003549814.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 686 0.0
>ref|XP_002529205.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223531323|gb|EEF33161.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 590
Score = 721 bits (1860), Expect = 0.0
Identities = 361/431 (83%), Positives = 388/431 (90%), Gaps = 1/431 (0%)
Frame = -1
Query: 1515 TGSGKTLAFLVPAVELLYQLHFAPRNGTGVIIICPTRELAIQTHAVAKELLKYHSQTHGL 1336
TGSGKTLAFL+PAVELLY +HFAPRNGTGV++ICPTRELAIQTHAVAK+LLKYHSQT GL
Sbjct: 150 TGSGKTLAFLIPAVELLYNVHFAPRNGTGVVVICPTRELAIQTHAVAKDLLKYHSQTLGL 209
Query: 1335 VIGGSARKSEAERLAKGVNLLVATPGRLLDHLQNTKGFIYNRLKCLTIDEADRILEANFE 1156
VIGGSARK EAER+ KGVNLLVATPGRLLDHLQNTKGFIY LKCL IDEADRILEANFE
Sbjct: 210 VIGGSARKGEAERIVKGVNLLVATPGRLLDHLQNTKGFIYKNLKCLMIDEADRILEANFE 269
Query: 1155 EEMKQIIKILPKERQAALFSATQTKKVADLARVSLK-DPVYVGVDDERKRVTNEGLEQGY 979
EEMKQIIKILPK RQ ALFSATQTKKV DLAR+S + PVY+ VDD R +VTNEGL+QGY
Sbjct: 270 EEMKQIIKILPKSRQTALFSATQTKKVEDLARLSFQITPVYIDVDDGRTKVTNEGLQQGY 329
Query: 978 CVVPCAKRFIVLYSFLKRHQSQKVMVFFSSVNSVKFHSELLKYIHVDCFDIHGXXXXXKR 799
CVV AKRFI+LYSFLKR+ S+KVMVFFSS NSVKFHSELL+YI V+CFDIHG KR
Sbjct: 330 CVVHSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVECFDIHGKQKQQKR 389
Query: 798 TTTFFDFCKAEKGILLCTDVAARGLDIPSVDWIIQYDPPDDPKEYVHRVGRTARGEGSKG 619
TTTFFDFCKAEKGILLCTDVAARGLDIP+VDWI+QYDPPD+PKEY+HRVGRTARGEG KG
Sbjct: 390 TTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGEGGKG 449
Query: 618 NALLFLTPEELQFLSHLKAAKVPVKEYEFPEKKLANVQSHLEKLVANNYYLNKSAKEAYR 439
NALLFL PEELQFL +LKAAKVPVKEYEF KKLANVQSHLEKLVANNYYLNKSAK+AYR
Sbjct: 450 NALLFLIPEELQFLRYLKAAKVPVKEYEFDVKKLANVQSHLEKLVANNYYLNKSAKDAYR 509
Query: 438 SYVLAYNSHSSKDIFNVHRLDLQGVAASFCFDSPPKVSINIDSSASKFRKTKRKDGRSRN 259
SY+LAYNSHS KDIFNVHRLDLQ VAASFCF PPKV++NIDS+ASKFRK K SRN
Sbjct: 510 SYILAYNSHSMKDIFNVHRLDLQAVAASFCFSCPPKVNLNIDSNASKFRKKAHKG--SRN 567
Query: 258 GFSSSNPYGNR 226
GFS SNPYG +
Sbjct: 568 GFSESNPYGRQ 578
>emb|CBI15398.3| unnamed protein product [Vitis vinifera]
Length = 492
Score = 715 bits (1845), Expect = 0.0
Identities = 354/431 (82%), Positives = 387/431 (89%), Gaps = 1/431 (0%)
Frame = -1
Query: 1515 TGSGKTLAFLVPAVELLYQLHFAPRNGTGVIIICPTRELAIQTHAVAKELLKYHSQTHGL 1336
TGSGKTLAFL+PAVELLY + F PRNGTGV++ICPTRELAIQTHAVAK+LLKYH+QT GL
Sbjct: 50 TGSGKTLAFLIPAVELLYHISFMPRNGTGVVVICPTRELAIQTHAVAKDLLKYHTQTLGL 109
Query: 1335 VIGGSARKSEAERLAKGVNLLVATPGRLLDHLQNTKGFIYNRLKCLTIDEADRILEANFE 1156
VIGGSAR+ EAERLAKG NLLVATPGRLLDHLQNTKGFIY LKCL IDEADRILEANFE
Sbjct: 110 VIGGSARRGEAERLAKGANLLVATPGRLLDHLQNTKGFIYKNLKCLIIDEADRILEANFE 169
Query: 1155 EEMKQIIKILPKERQAALFSATQTKKVADLARVSLKD-PVYVGVDDERKRVTNEGLEQGY 979
EEMKQIIK+LPKERQ ALFSATQTKKV DLAR+S + PVY+ VDD R +VTNEGL+QGY
Sbjct: 170 EEMKQIIKLLPKERQTALFSATQTKKVEDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGY 229
Query: 978 CVVPCAKRFIVLYSFLKRHQSQKVMVFFSSVNSVKFHSELLKYIHVDCFDIHGXXXXXKR 799
CVVP AKRF++LYSFLKR+ S+KVMVFFSS NSVK+HSELL+YI VDC DIHG KR
Sbjct: 230 CVVPSAKRFVLLYSFLKRNLSKKVMVFFSSCNSVKYHSELLRYIQVDCLDIHGKQKQQKR 289
Query: 798 TTTFFDFCKAEKGILLCTDVAARGLDIPSVDWIIQYDPPDDPKEYVHRVGRTARGEGSKG 619
T+TFFDFCKAEKGILLCTDVAARGLDIP VDWI+QYDPPD+PKEY+HRVGRTARGEG KG
Sbjct: 290 TSTFFDFCKAEKGILLCTDVAARGLDIPDVDWIVQYDPPDEPKEYIHRVGRTARGEGKKG 349
Query: 618 NALLFLTPEELQFLSHLKAAKVPVKEYEFPEKKLANVQSHLEKLVANNYYLNKSAKEAYR 439
NALLFL PEELQFL +LKAAKVPVKEYE+ KKLANVQSHLEKLV+NNYYLNKSAK+AYR
Sbjct: 350 NALLFLIPEELQFLRYLKAAKVPVKEYEYDVKKLANVQSHLEKLVSNNYYLNKSAKDAYR 409
Query: 438 SYVLAYNSHSSKDIFNVHRLDLQGVAASFCFDSPPKVSINIDSSASKFRKTKRKDGRSRN 259
SY+LAYNSHS KDIFNVHRLDLQ VA+SFCF SPPKV+++IDSSASKFRK K SRN
Sbjct: 410 SYILAYNSHSMKDIFNVHRLDLQAVASSFCFSSPPKVNLSIDSSASKFRKKTHKVEGSRN 469
Query: 258 GFSSSNPYGNR 226
GFS SNPYG +
Sbjct: 470 GFSESNPYGRQ 480
>ref|XP_002275026.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 51-like isoform 1
[Vitis vinifera]
Length = 580
Score = 715 bits (1845), Expect = 0.0
Identities = 354/431 (82%), Positives = 387/431 (89%), Gaps = 1/431 (0%)
Frame = -1
Query: 1515 TGSGKTLAFLVPAVELLYQLHFAPRNGTGVIIICPTRELAIQTHAVAKELLKYHSQTHGL 1336
TGSGKTLAFL+PAVELLY + F PRNGTGV++ICPTRELAIQTHAVAK+LLKYH+QT GL
Sbjct: 138 TGSGKTLAFLIPAVELLYHISFMPRNGTGVVVICPTRELAIQTHAVAKDLLKYHTQTLGL 197
Query: 1335 VIGGSARKSEAERLAKGVNLLVATPGRLLDHLQNTKGFIYNRLKCLTIDEADRILEANFE 1156
VIGGSAR+ EAERLAKG NLLVATPGRLLDHLQNTKGFIY LKCL IDEADRILEANFE
Sbjct: 198 VIGGSARRGEAERLAKGANLLVATPGRLLDHLQNTKGFIYKNLKCLIIDEADRILEANFE 257
Query: 1155 EEMKQIIKILPKERQAALFSATQTKKVADLARVSLKD-PVYVGVDDERKRVTNEGLEQGY 979
EEMKQIIK+LPKERQ ALFSATQTKKV DLAR+S + PVY+ VDD R +VTNEGL+QGY
Sbjct: 258 EEMKQIIKLLPKERQTALFSATQTKKVEDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGY 317
Query: 978 CVVPCAKRFIVLYSFLKRHQSQKVMVFFSSVNSVKFHSELLKYIHVDCFDIHGXXXXXKR 799
CVVP AKRF++LYSFLKR+ S+KVMVFFSS NSVK+HSELL+YI VDC DIHG KR
Sbjct: 318 CVVPSAKRFVLLYSFLKRNLSKKVMVFFSSCNSVKYHSELLRYIQVDCLDIHGKQKQQKR 377
Query: 798 TTTFFDFCKAEKGILLCTDVAARGLDIPSVDWIIQYDPPDDPKEYVHRVGRTARGEGSKG 619
T+TFFDFCKAEKGILLCTDVAARGLDIP VDWI+QYDPPD+PKEY+HRVGRTARGEG KG
Sbjct: 378 TSTFFDFCKAEKGILLCTDVAARGLDIPDVDWIVQYDPPDEPKEYIHRVGRTARGEGKKG 437
Query: 618 NALLFLTPEELQFLSHLKAAKVPVKEYEFPEKKLANVQSHLEKLVANNYYLNKSAKEAYR 439
NALLFL PEELQFL +LKAAKVPVKEYE+ KKLANVQSHLEKLV+NNYYLNKSAK+AYR
Sbjct: 438 NALLFLIPEELQFLRYLKAAKVPVKEYEYDVKKLANVQSHLEKLVSNNYYLNKSAKDAYR 497
Query: 438 SYVLAYNSHSSKDIFNVHRLDLQGVAASFCFDSPPKVSINIDSSASKFRKTKRKDGRSRN 259
SY+LAYNSHS KDIFNVHRLDLQ VA+SFCF SPPKV+++IDSSASKFRK K SRN
Sbjct: 498 SYILAYNSHSMKDIFNVHRLDLQAVASSFCFSSPPKVNLSIDSSASKFRKKTHKVEGSRN 557
Query: 258 GFSSSNPYGNR 226
GFS SNPYG +
Sbjct: 558 GFSESNPYGRQ 568
>ref|XP_002298317.1| predicted protein [Populus trichocarpa] gi|222845575|gb|EEE83122.1|
predicted protein [Populus trichocarpa]
Length = 574
Score = 711 bits (1836), Expect = 0.0
Identities = 352/434 (81%), Positives = 392/434 (90%), Gaps = 1/434 (0%)
Frame = -1
Query: 1515 TGSGKTLAFLVPAVELLYQLHFAPRNGTGVIIICPTRELAIQTHAVAKELLKYHSQTHGL 1336
TGSGKTLAFL+PAVELL+ +HFAPRNGTGV++ICPTRELAIQTHAVAK+LLKYHSQT GL
Sbjct: 134 TGSGKTLAFLIPAVELLHNVHFAPRNGTGVVVICPTRELAIQTHAVAKDLLKYHSQTLGL 193
Query: 1335 VIGGSARKSEAERLAKGVNLLVATPGRLLDHLQNTKGFIYNRLKCLTIDEADRILEANFE 1156
VIGG+AR+ EAERL KGVNLLVATPGRLLDHLQNTKGFIY LKCLTIDEADRILEANFE
Sbjct: 194 VIGGAARRGEAERLVKGVNLLVATPGRLLDHLQNTKGFIYKNLKCLTIDEADRILEANFE 253
Query: 1155 EEMKQIIKILPKERQAALFSATQTKKVADLARVSLKD-PVYVGVDDERKRVTNEGLEQGY 979
EEMKQIIK+LPK RQ ALFSATQTKKV DLAR+S + PVY+ VDD R +VTNEGL+QGY
Sbjct: 254 EEMKQIIKLLPKARQTALFSATQTKKVEDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGY 313
Query: 978 CVVPCAKRFIVLYSFLKRHQSQKVMVFFSSVNSVKFHSELLKYIHVDCFDIHGXXXXXKR 799
CVVP AKRF++LYSF KR+ S+KVMVFFSS NSVKFH++LL+YI V+CFDIHG KR
Sbjct: 314 CVVPSAKRFVLLYSFFKRNLSKKVMVFFSSCNSVKFHADLLRYIQVECFDIHGKQKQQKR 373
Query: 798 TTTFFDFCKAEKGILLCTDVAARGLDIPSVDWIIQYDPPDDPKEYVHRVGRTARGEGSKG 619
T+TFFDFCKAEKGILLCTDVAARGLDIP+VDWI+Q+DPPD+PKEY+HRVGRTARGEG+KG
Sbjct: 374 TSTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQFDPPDEPKEYIHRVGRTARGEGAKG 433
Query: 618 NALLFLTPEELQFLSHLKAAKVPVKEYEFPEKKLANVQSHLEKLVANNYYLNKSAKEAYR 439
NALLFL PEELQFL +LKAAKVPVKEYEF +KKLANVQS LEKLVANNYYLNKSAK+AYR
Sbjct: 434 NALLFLIPEELQFLRYLKAAKVPVKEYEFDQKKLANVQSQLEKLVANNYYLNKSAKDAYR 493
Query: 438 SYVLAYNSHSSKDIFNVHRLDLQGVAASFCFDSPPKVSINIDSSASKFRKTKRKDGRSRN 259
SY+LAYNSHS KDIFNVHRLDLQ VAASFCF SPPKV++N++S+ASKFRK K SRN
Sbjct: 494 SYMLAYNSHSMKDIFNVHRLDLQAVAASFCFSSPPKVNLNMESNASKFRKKTHKG--SRN 551
Query: 258 GFSSSNPYGNRG*G 217
GF+ SNPYG + G
Sbjct: 552 GFNESNPYGRQSDG 565
>ref|XP_003549814.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 27-like [Glycine max]
Length = 575
Score = 686 bits (1769), Expect = 0.0
Identities = 342/431 (79%), Positives = 373/431 (86%), Gaps = 1/431 (0%)
Frame = -1
Query: 1515 TGSGKTLAFLVPAVELLYQLHFAPRNGTGVIIICPTRELAIQTHAVAKELLKYHSQTHGL 1336
TGSGKTLAFL+PAVELLY + F PRNG GVI+ICPTRELAIQTHAVAKELLKYHSQT GL
Sbjct: 136 TGSGKTLAFLIPAVELLYNVKFTPRNGAGVIVICPTRELAIQTHAVAKELLKYHSQTLGL 195
Query: 1335 VIGGSARKSEAERLAKGVNLLVATPGRLLDHLQNTKGFIYNRLKCLTIDEADRILEANFE 1156
VIGGSARK EAER+AKG+NLLV TPGRLLDHLQNTKGFIY LKCL IDEADRILEANFE
Sbjct: 196 VIGGSARKIEAERIAKGINLLVGTPGRLLDHLQNTKGFIYKNLKCLMIDEADRILEANFE 255
Query: 1155 EEMKQIIKILPKERQAALFSATQTKKVADLARVSLKD-PVYVGVDDERKRVTNEGLEQGY 979
EEMKQIIKILPK RQ ALFSATQTKKV DLAR+S + P+Y+ VDD R +VTNEGL QGY
Sbjct: 256 EEMKQIIKILPKNRQTALFSATQTKKVEDLARLSFQTTPIYIDVDDGRTKVTNEGLLQGY 315
Query: 978 CVVPCAKRFIVLYSFLKRHQSQKVMVFFSSVNSVKFHSELLKYIHVDCFDIHGXXXXXKR 799
VVPCAKRFIVLYSFLKRHQS+KVMVFFSS NSVKFH+++L I ++C IHG R
Sbjct: 316 VVVPCAKRFIVLYSFLKRHQSKKVMVFFSSCNSVKFHADILNLIQLNCSSIHGKQKQQSR 375
Query: 798 TTTFFDFCKAEKGILLCTDVAARGLDIPSVDWIIQYDPPDDPKEYVHRVGRTARGEGSKG 619
TTTFFDFCKAEKGILLCTDVAARGLDIP+VDWI+QYDPPD+PKEY+HRVGRTARGEG KG
Sbjct: 376 TTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGEGGKG 435
Query: 618 NALLFLTPEELQFLSHLKAAKVPVKEYEFPEKKLANVQSHLEKLVANNYYLNKSAKEAYR 439
NALLFL PEELQFL +LKAAKVPVKEY + EKK+ANVQSHLE LV NN+YLNK AKEAYR
Sbjct: 436 NALLFLIPEELQFLRYLKAAKVPVKEYAYDEKKVANVQSHLENLVVNNFYLNKMAKEAYR 495
Query: 438 SYVLAYNSHSSKDIFNVHRLDLQGVAASFCFDSPPKVSINIDSSASKFRKTKRKDGRSRN 259
SY+LAYNSHS KDIFN+H LDLQ VA+SFCF +PP VS+NI+S SK R RK SR+
Sbjct: 496 SYILAYNSHSMKDIFNIHHLDLQAVASSFCFSNPPNVSLNINS--SKQRNKMRKVDGSRH 553
Query: 258 GFSSSNPYGNR 226
GFS NPYG R
Sbjct: 554 GFSGDNPYGKR 564