BLASTX nr result

ID: Bupleurum21_contig00012692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012692
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263868.1| PREDICTED: vacuolar protein-sorting-associat...    94   1e-17
ref|XP_002519434.1| conserved hypothetical protein [Ricinus comm...    81   1e-13
ref|XP_004137854.1| PREDICTED: vacuolar protein-sorting-associat...    77   1e-12
ref|XP_002326225.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_002877902.1| hypothetical protein ARALYDRAFT_906697 [Arab...    66   3e-09

>ref|XP_002263868.1| PREDICTED: vacuolar protein-sorting-associated protein 37 homolog 2
           [Vitis vinifera] gi|297740010|emb|CBI30192.3| unnamed
           protein product [Vitis vinifera]
          Length = 233

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 49/85 (57%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
 Frame = +1

Query: 142 MFKSFWGSQEQEAQPRPQEISTDSWYPPSVLSS-QNXXXXXXXXXXXXXXXXXXXGNRPQ 318
           MFKSFWGSQEQ+ QPRPQ+IS  SWYPPSV++S  +                    +RPQ
Sbjct: 1   MFKSFWGSQEQQPQPRPQDISGQSWYPPSVVTSPSSSRPSTPSSSTSSSFSLQRPSDRPQ 60

Query: 319 SSSPVSPAEAAGIIVYLKDKSVDEL 393
           S S VSPAEAAG+IV LKDKS+DEL
Sbjct: 61  SPSHVSPAEAAGMIVLLKDKSIDEL 85


>ref|XP_002519434.1| conserved hypothetical protein [Ricinus communis]
           gi|223541297|gb|EEF42848.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 229

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 47/85 (55%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
 Frame = +1

Query: 142 MFKSFWGSQEQEAQPRPQEI-STDSWYPPSVLSSQNXXXXXXXXXXXXXXXXXXXGNRPQ 318
           MFK FWGSQEQ+ QPRPQ++ +  SWYP SV+SS N                     RPQ
Sbjct: 1   MFK-FWGSQEQQGQPRPQDVPAPQSWYPSSVVSSPNSSRPTTPSSSSSSSYGL---QRPQ 56

Query: 319 SSSPVSPAEAAGIIVYLKDKSVDEL 393
           S S VSPAEAAG+I  LKDKSVDEL
Sbjct: 57  SPSHVSPAEAAGVIALLKDKSVDEL 81


>ref|XP_004137854.1| PREDICTED: vacuolar protein-sorting-associated protein 37 homolog
           2-like [Cucumis sativus]
           gi|449501015|ref|XP_004161255.1| PREDICTED: vacuolar
           protein-sorting-associated protein 37 homolog 2-like
           [Cucumis sativus]
          Length = 224

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 46/84 (54%), Positives = 53/84 (63%)
 Frame = +1

Query: 142 MFKSFWGSQEQEAQPRPQEISTDSWYPPSVLSSQNXXXXXXXXXXXXXXXXXXXGNRPQS 321
           MFK FWGSQE++ +P P ++ST SWYPPSV SS+                     +RPQS
Sbjct: 1   MFK-FWGSQEEQVRP-PPDVSTQSWYPPSVSSSR---PGTPGSTSSNHSSSQRLSDRPQS 55

Query: 322 SSPVSPAEAAGIIVYLKDKSVDEL 393
            S VSPAEAAGII  LKDKSVDEL
Sbjct: 56  PSHVSPAEAAGIISALKDKSVDEL 79


>ref|XP_002326225.1| predicted protein [Populus trichocarpa] gi|222833418|gb|EEE71895.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 41/87 (47%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
 Frame = +1

Query: 142 MFKSFWGSQEQEAQPRPQEIS---TDSWYPPSVLSSQNXXXXXXXXXXXXXXXXXXXGNR 312
           MFK FWGSQEQ+ QP PQE++     SWYPPSV+ S +                      
Sbjct: 1   MFK-FWGSQEQQGQPGPQEVAQGPAQSWYPPSVVGSPSSSRPATPTSTSSSTSHSFQSPA 59

Query: 313 PQSSSPVSPAEAAGIIVYLKDKSVDEL 393
            +  SP SPAEAA  I  LKDKSVDEL
Sbjct: 60  ERPLSP-SPAEAAAFITLLKDKSVDEL 85


>ref|XP_002877902.1| hypothetical protein ARALYDRAFT_906697 [Arabidopsis lyrata subsp.
           lyrata] gi|297323740|gb|EFH54161.1| hypothetical protein
           ARALYDRAFT_906697 [Arabidopsis lyrata subsp. lyrata]
          Length = 217

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 6/87 (6%)
 Frame = +1

Query: 151 SFWGSQEQE-AQPRPQEISTDS-WYPPSVLSSQNXXXXXXXXXXXXXXXXXXXGNRPQSS 324
           +FWGS++Q+  Q RPQE S+ S WYPPS++SS +                    +RPQ+S
Sbjct: 3   NFWGSKDQQQGQSRPQEASSQSPWYPPSLVSSPS-------------------SSRPQTS 43

Query: 325 SP----VSPAEAAGIIVYLKDKSVDEL 393
                 VSP EAAGII +LKDKSVDEL
Sbjct: 44  GQIGANVSPGEAAGIIAFLKDKSVDEL 70


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