BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012689
         (1732 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275643.2| PREDICTED: DNA polymerase eta [Vitis vinifera]    716   0.0  
emb|CBI27227.3| unnamed protein product [Vitis vinifera]              715   0.0  
ref|XP_003638302.1| DNA polymerase eta [Medicago truncatula] gi|...   683   0.0  
ref|XP_002863547.1| hypothetical protein ARALYDRAFT_494508 [Arab...   674   0.0  
ref|NP_568638.2| DNA polymerase eta subunit [Arabidopsis thalian...   670   0.0  

>ref|XP_002275643.2| PREDICTED: DNA polymerase eta [Vitis vinifera]
          Length = 779

 Score =  716 bits (1847), Expect = 0.0
 Identities = 360/475 (75%), Positives = 407/475 (85%), Gaps = 1/475 (0%)
 Frame = +1

Query: 4    VARVESSDSRVIAHVDMDCFYVQVEQRKQPNLRGHPTAVVQYNSWKGGGLIAVSYEARKF 183
            VA+ ESSD+R+IAH+DMDCFYVQVEQRKQP+LRG PTAVVQYNSWKGGGLIAVSYEARKF
Sbjct: 3    VAKPESSDARIIAHIDMDCFYVQVEQRKQPDLRGLPTAVVQYNSWKGGGLIAVSYEARKF 62

Query: 184  GVKRSMRGDEAKNVCPEIQLVRVPVARGKADLTIYRNAGSEVVAILARKGRCERASIDEV 363
            GVKRSMRGDEAK VCP+IQLV+VPVARGKADL +YRNAGSEVV+ILARKGRCERASIDEV
Sbjct: 63   GVKRSMRGDEAKQVCPQIQLVQVPVARGKADLNVYRNAGSEVVSILARKGRCERASIDEV 122

Query: 364  YLDLTDAAYQMMSETPPESLEAIDEEVIKSHVLGLNTEAGDGRQVVRDWICRSNADRRDK 543
            YLDLTDAA  M++E PPESLEAIDEE +KSHVLGLN    D ++ VR W+CRS AD RDK
Sbjct: 123  YLDLTDAAEAMLAEMPPESLEAIDEEALKSHVLGLNEGGNDIKESVRVWLCRSQADHRDK 182

Query: 544  LLACGAFIVAELRMQVLKETEFSCSAGIAHNKMLAKLASGMNKPAQQTVVPFSSVKGLLE 723
            LLACGA IVAELRMQV +ETEF+CSAGIAHNKMLAKLAS MNKPAQQT+VP S V+GLL 
Sbjct: 183  LLACGALIVAELRMQVFRETEFTCSAGIAHNKMLAKLASAMNKPAQQTIVPLSCVRGLLG 242

Query: 724  QLPIRKMKHLGGKLGCSLQEDLGVNIVGDLLQFSEERLQDRYGINTGTWLWNIARGINGD 903
             LPI+KMK LGGKLG SLQ DLGVN VGDLLQFSEE+LQ+ YGINTGTWLWNIARGI+G+
Sbjct: 243  SLPIKKMKQLGGKLGSSLQSDLGVNTVGDLLQFSEEKLQECYGINTGTWLWNIARGISGE 302

Query: 904  EVESRVLPKSHGTGKTFPGLNSLTTIAGIECWLNKFSEELAERLEADLKQNKRIAHTLTL 1083
            EVESR+L KSHG+GKTFPG  +L TIA +E WLN+  EEL ERL +DL+QNKRIAHTLTL
Sbjct: 303  EVESRLLSKSHGSGKTFPGPKALKTIASVENWLNELCEELDERLRSDLEQNKRIAHTLTL 362

Query: 1084 HATAYKAVESEAQRKFPSKSCPLRYGITKIQEDAMNLFQAGLREYLSPSSM-TQGNGCIK 1260
            HA AYK+ +S++ +KFPSKSCPLRYGI KIQEDA+NLFQAGLREYL    + T+ N C  
Sbjct: 363  HARAYKSNDSDSHKKFPSKSCPLRYGIAKIQEDALNLFQAGLREYLGSCKVKTRANQCSG 422

Query: 1261 WGITNLSLSASKIVDIPSGTSSITKYFHGRDQFCTSTKVVKDKMKCEVAALSPSE 1425
            W IT LS+SASKIV IP+GT SI KYFHG+D   +S K  +D+   E A+LS S+
Sbjct: 423  WSITALSVSASKIVAIPTGTCSIMKYFHGQDLSSSSLKQPQDRSTEEAASLSHSD 477


>emb|CBI27227.3| unnamed protein product [Vitis vinifera]
          Length = 773

 Score =  715 bits (1845), Expect = 0.0
 Identities = 360/474 (75%), Positives = 406/474 (85%), Gaps = 1/474 (0%)
 Frame = +1

Query: 4    VARVESSDSRVIAHVDMDCFYVQVEQRKQPNLRGHPTAVVQYNSWKGGGLIAVSYEARKF 183
            VA+ ESSD+R+IAH+DMDCFYVQVEQRKQP+LRG PTAVVQYNSWKGGGLIAVSYEARKF
Sbjct: 3    VAKPESSDARIIAHIDMDCFYVQVEQRKQPDLRGLPTAVVQYNSWKGGGLIAVSYEARKF 62

Query: 184  GVKRSMRGDEAKNVCPEIQLVRVPVARGKADLTIYRNAGSEVVAILARKGRCERASIDEV 363
            GVKRSMRGDEAK VCP+IQLV+VPVARGKADL +YRNAGSEVV+ILARKGRCERASIDEV
Sbjct: 63   GVKRSMRGDEAKQVCPQIQLVQVPVARGKADLNVYRNAGSEVVSILARKGRCERASIDEV 122

Query: 364  YLDLTDAAYQMMSETPPESLEAIDEEVIKSHVLGLNTEAGDGRQVVRDWICRSNADRRDK 543
            YLDLTDAA  M++E PPESLEAIDEE +KSHVLGLN    D ++ VR W+CRS AD RDK
Sbjct: 123  YLDLTDAAEAMLAEMPPESLEAIDEEALKSHVLGLNEGGNDIKESVRVWLCRSQADHRDK 182

Query: 544  LLACGAFIVAELRMQVLKETEFSCSAGIAHNKMLAKLASGMNKPAQQTVVPFSSVKGLLE 723
            LLACGA IVAELRMQV +ETEF+CSAGIAHNKMLAKLAS MNKPAQQT+VP S V+GLL 
Sbjct: 183  LLACGALIVAELRMQVFRETEFTCSAGIAHNKMLAKLASAMNKPAQQTIVPLSCVRGLLG 242

Query: 724  QLPIRKMKHLGGKLGCSLQEDLGVNIVGDLLQFSEERLQDRYGINTGTWLWNIARGINGD 903
             LPI+KMK LGGKLG SLQ DLGVN VGDLLQFSEE+LQ+ YGINTGTWLWNIARGI+G+
Sbjct: 243  SLPIKKMKQLGGKLGSSLQSDLGVNTVGDLLQFSEEKLQECYGINTGTWLWNIARGISGE 302

Query: 904  EVESRVLPKSHGTGKTFPGLNSLTTIAGIECWLNKFSEELAERLEADLKQNKRIAHTLTL 1083
            EVESR+L KSHG+GKTFPG  +L TIA +E WLN+  EEL ERL +DL+QNKRIAHTLTL
Sbjct: 303  EVESRLLSKSHGSGKTFPGPKALKTIASVENWLNELCEELDERLRSDLEQNKRIAHTLTL 362

Query: 1084 HATAYKAVESEAQRKFPSKSCPLRYGITKIQEDAMNLFQAGLREYLSPSSM-TQGNGCIK 1260
            HA AYK+ +S++ +KFPSKSCPLRYGI KIQEDA+NLFQAGLREYL    + T+ N C  
Sbjct: 363  HARAYKSNDSDSHKKFPSKSCPLRYGIAKIQEDALNLFQAGLREYLGSCKVKTRANQCSG 422

Query: 1261 WGITNLSLSASKIVDIPSGTSSITKYFHGRDQFCTSTKVVKDKMKCEVAALSPS 1422
            W IT LS+SASKIV IP+GT SI KYFHG+D   +S K  +D+   E A+LS S
Sbjct: 423  WSITALSVSASKIVAIPTGTCSIMKYFHGQDLSSSSLKQPQDRSTEEAASLSHS 476


>ref|XP_003638302.1| DNA polymerase eta [Medicago truncatula] gi|355504237|gb|AES85440.1|
            DNA polymerase eta [Medicago truncatula]
          Length = 543

 Score =  683 bits (1763), Expect = 0.0
 Identities = 348/474 (73%), Positives = 396/474 (83%), Gaps = 1/474 (0%)
 Frame = +1

Query: 4    VARVESSDSRVIAHVDMDCFYVQVEQRKQPNLRGHPTAVVQYNSWKGGGLIAVSYEARKF 183
            V R ES D RVIAHVDMDCFYVQVEQRKQP+LRG PTAVVQYNS+KGGGLIAVSYEARK 
Sbjct: 3    VGRRESCDGRVIAHVDMDCFYVQVEQRKQPSLRGLPTAVVQYNSYKGGGLIAVSYEARKS 62

Query: 184  GVKRSMRGDEAKNVCPEIQLVRVPVARGKADLTIYRNAGSEVVAILARKGRCERASIDEV 363
            GVKRSMRGDEAK  CP+IQLV+VPVARGKA+L  YRNAGSEVV+IL+RKGRCERASIDEV
Sbjct: 63   GVKRSMRGDEAKEACPQIQLVQVPVARGKANLNTYRNAGSEVVSILSRKGRCERASIDEV 122

Query: 364  YLDLTDAAYQMMSETPPESLEAIDEEVIKSHVLGLNTEAGD-GRQVVRDWICRSNADRRD 540
            YLDLTDAA  M+ ETPPE +E ++EEV+KSHVLGL  + GD  ++ VR WICRS+A  ++
Sbjct: 123  YLDLTDAAQTMLMETPPECVEHVEEEVLKSHVLGLQIKDGDDAKEEVRKWICRSDASYQE 182

Query: 541  KLLACGAFIVAELRMQVLKETEFSCSAGIAHNKMLAKLASGMNKPAQQTVVPFSSVKGLL 720
            KLLACGAFIVAELRMQVLKETEF+CSAGIAHNKMLAKLAS MNKPAQQTVVP SSV+GLL
Sbjct: 183  KLLACGAFIVAELRMQVLKETEFTCSAGIAHNKMLAKLASAMNKPAQQTVVPHSSVEGLL 242

Query: 721  EQLPIRKMKHLGGKLGCSLQEDLGVNIVGDLLQFSEERLQDRYGINTGTWLWNIARGING 900
            E  PI+KMK LGGKLG SLQ DLG+N VGDLLQFSEE+LQ RYGINTGTWLWNIARGI+G
Sbjct: 243  ESFPIKKMKQLGGKLGTSLQSDLGINTVGDLLQFSEEKLQQRYGINTGTWLWNIARGISG 302

Query: 901  DEVESRVLPKSHGTGKTFPGLNSLTTIAGIECWLNKFSEELAERLEADLKQNKRIAHTLT 1080
            +EVE R+LPKSHG+GKTFPG  +L TIA ++ WLN+  EEL+ERL++D+ QNKRIAHTLT
Sbjct: 303  EEVEGRLLPKSHGSGKTFPGPQALKTIASVQHWLNELGEELSERLDSDMDQNKRIAHTLT 362

Query: 1081 LHATAYKAVESEAQRKFPSKSCPLRYGITKIQEDAMNLFQAGLREYLSPSSMTQGNGCIK 1260
            LHA AYK  +S++ +KFPSKSCPLRYG TKIQEDA+ LFQ+GLR++L   +        K
Sbjct: 363  LHARAYKKGDSDSHKKFPSKSCPLRYGTTKIQEDALTLFQSGLRDFLGLYNSKTNGSENK 422

Query: 1261 WGITNLSLSASKIVDIPSGTSSITKYFHGRDQFCTSTKVVKDKMKCEVAALSPS 1422
            WGIT LS+SASKIV IPSGT SITKYF       +S+    D +  EVA  SPS
Sbjct: 423  WGITALSVSASKIVPIPSGTHSITKYFSETFPHGSSSNQSVDNVIDEVAPSSPS 476


>ref|XP_002863547.1| hypothetical protein ARALYDRAFT_494508 [Arabidopsis lyrata subsp.
            lyrata] gi|297309382|gb|EFH39806.1| hypothetical protein
            ARALYDRAFT_494508 [Arabidopsis lyrata subsp. lyrata]
          Length = 672

 Score =  674 bits (1738), Expect = 0.0
 Identities = 333/448 (74%), Positives = 390/448 (87%), Gaps = 2/448 (0%)
 Frame = +1

Query: 4    VARVESSDSRVIAHVDMDCFYVQVEQRKQPNLRGHPTAVVQYNSWKGGGLIAVSYEARKF 183
            VAR E+SD+RVIAHVDMDCFYVQVEQRKQP LRG PTAVVQYN W+GGGLIAVSYEARK 
Sbjct: 3    VARAETSDARVIAHVDMDCFYVQVEQRKQPELRGLPTAVVQYNEWQGGGLIAVSYEARKC 62

Query: 184  GVKRSMRGDEAKNVCPEIQLVRVPVARGKADLTIYRNAGSEVVAILARKGRCERASIDEV 363
            GVKRSMRGDEAK VCP+IQLV+VPVARGKADL +YR AGSEVV+ILA+ G+CERASIDEV
Sbjct: 63   GVKRSMRGDEAKAVCPQIQLVQVPVARGKADLNLYRGAGSEVVSILAKSGKCERASIDEV 122

Query: 364  YLDLTDAAYQMMSETPPESLEAIDEEVIKSHVLGLNTEAGDG-RQVVRDWICRSNADRRD 540
            YLDLTDAA  M+++ PPESLE IDEEV+KSH+LG++ E GD  ++ VRDWICR +ADRR+
Sbjct: 123  YLDLTDAAESMLADAPPESLELIDEEVLKSHILGMSREDGDDFKENVRDWICRKDADRRE 182

Query: 541  KLLACGAFIVAELRMQVLKETEFSCSAGIAHNKMLAKLASGMNKPAQQTVVPFSSVKGLL 720
            KLL+CG  IVAELR QVLKETEF+CSAGIAHNKMLAKLASGMNKPAQQTVVP+S+V+ LL
Sbjct: 183  KLLSCGIIIVAELRKQVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTVVPYSAVQELL 242

Query: 721  EQLPIRKMKHLGGKLGCSLQEDLGVNIVGDLLQFSEERLQDRYGINTGTWLWNIARGING 900
              LPI+KMK LGGKLG SLQ DLG++ VGDLLQ+SE +LQ+ YGINTGTWLWNIARGI+G
Sbjct: 243  SSLPIKKMKQLGGKLGTSLQTDLGIDTVGDLLQYSETKLQEHYGINTGTWLWNIARGISG 302

Query: 901  DEVESRVLPKSHGTGKTFPGLNSLTTIAGIECWLNKFSEELAERLEADLKQNKRIAHTLT 1080
            +EV+ R+LPKSHG+GKTFPG  +L +++ ++ WLN+ SEEL+ERL +DL+QNKRIA TLT
Sbjct: 303  EEVQGRLLPKSHGSGKTFPGPRALKSLSTVQHWLNQLSEELSERLSSDLEQNKRIASTLT 362

Query: 1081 LHATAYKAVESEAQRKFPSKSCPLRYGITKIQEDAMNLFQAGLREYLSP-SSMTQGNGCI 1257
            LHA+A+K+ +S + +KFPSKSCPLRYG+TKIQEDA NLFQA  REY+ P  S  +GN   
Sbjct: 363  LHASAFKSRDSNSHKKFPSKSCPLRYGVTKIQEDAFNLFQAAFREYMGPFGSKPRGNKQE 422

Query: 1258 KWGITNLSLSASKIVDIPSGTSSITKYF 1341
             W IT LS+SASKIVDIPSGTSSI +YF
Sbjct: 423  TWRITGLSISASKIVDIPSGTSSIMRYF 450


>ref|NP_568638.2| DNA polymerase eta subunit [Arabidopsis thaliana]
            gi|23954185|emb|CAC94893.1| putative DNA polymerase eta
            [Arabidopsis thaliana] gi|332007772|gb|AED95155.1| DNA
            polymerase eta subunit [Arabidopsis thaliana]
          Length = 672

 Score =  670 bits (1728), Expect = 0.0
 Identities = 330/451 (73%), Positives = 392/451 (86%), Gaps = 2/451 (0%)
 Frame = +1

Query: 4    VARVESSDSRVIAHVDMDCFYVQVEQRKQPNLRGHPTAVVQYNSWKGGGLIAVSYEARKF 183
            VAR E+SD+RVIAHVDMDCFYVQVEQRKQP LRG P+AVVQYN W+GGGLIAVSYEARK 
Sbjct: 3    VARPEASDARVIAHVDMDCFYVQVEQRKQPELRGLPSAVVQYNEWQGGGLIAVSYEARKC 62

Query: 184  GVKRSMRGDEAKNVCPEIQLVRVPVARGKADLTIYRNAGSEVVAILARKGRCERASIDEV 363
            GVKRSMRGDEAK  CP+IQLV+VPVARGKADL +YR+AGSEVV+ILA+ G+CERASIDEV
Sbjct: 63   GVKRSMRGDEAKAACPQIQLVQVPVARGKADLNLYRSAGSEVVSILAKSGKCERASIDEV 122

Query: 364  YLDLTDAAYQMMSETPPESLEAIDEEVIKSHVLGLNTEAGDG-RQVVRDWICRSNADRRD 540
            YLDLTDAA  M+++ PPESLE IDEEV+KSH+LG+N E GD  ++ VR+WICR +ADRRD
Sbjct: 123  YLDLTDAAESMLADAPPESLELIDEEVLKSHILGMNREDGDDFKESVRNWICREDADRRD 182

Query: 541  KLLACGAFIVAELRMQVLKETEFSCSAGIAHNKMLAKLASGMNKPAQQTVVPFSSVKGLL 720
            KLL+CG  IVAELR QVLKETEF+CSAGIAHNKMLAKLASGMNKPAQQTVVP+++V+ LL
Sbjct: 183  KLLSCGIIIVAELRKQVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTVVPYAAVQELL 242

Query: 721  EQLPIRKMKHLGGKLGCSLQEDLGVNIVGDLLQFSEERLQDRYGINTGTWLWNIARGING 900
              LPI+KMK LGGKLG SLQ DLGV+ VGDLLQFSE +LQ+ YG+NTGTWLWNIARGI+G
Sbjct: 243  SSLPIKKMKQLGGKLGTSLQTDLGVDTVGDLLQFSETKLQEHYGVNTGTWLWNIARGISG 302

Query: 901  DEVESRVLPKSHGTGKTFPGLNSLTTIAGIECWLNKFSEELAERLEADLKQNKRIAHTLT 1080
            +EV+ R+LPKSHG+GKTFPG  +L +++ ++ WLN+ SEEL+ERL +DL+QNKRIA TLT
Sbjct: 303  EEVQGRLLPKSHGSGKTFPGPRALKSLSTVQHWLNQLSEELSERLGSDLEQNKRIASTLT 362

Query: 1081 LHATAYKAVESEAQRKFPSKSCPLRYGITKIQEDAMNLFQAGLREYLSPSSM-TQGNGCI 1257
            LHA+A+++ +S++ +KFPSKSCP+RYG+TKIQEDA NLFQA LREY+    +  QGN   
Sbjct: 363  LHASAFRSKDSDSHKKFPSKSCPMRYGVTKIQEDAFNLFQAALREYMGSFGIKPQGNKLE 422

Query: 1258 KWGITNLSLSASKIVDIPSGTSSITKYFHGR 1350
             W IT LS+SASKIVDIPSGTSSI +YF  +
Sbjct: 423  TWRITGLSVSASKIVDIPSGTSSIMRYFQSQ 453