BLASTX nr result

ID: Bupleurum21_contig00012667 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012667
         (951 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525760.1| Cyclic nucleotide-gated ion channel, putativ...   405   e-111
ref|XP_003634689.1| PREDICTED: cyclic nucleotide-gated ion chann...   398   e-108
ref|XP_002330420.1| predicted protein [Populus trichocarpa] gi|2...   394   e-107
ref|XP_003539580.1| PREDICTED: cyclic nucleotide-gated ion chann...   379   e-103
ref|XP_003526201.1| PREDICTED: cyclic nucleotide-gated ion chann...   378   e-102

>ref|XP_002525760.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
           gi|223534910|gb|EEF36596.1| Cyclic nucleotide-gated ion
           channel, putative [Ricinus communis]
          Length = 687

 Score =  405 bits (1041), Expect = e-111
 Identities = 195/296 (65%), Positives = 227/296 (76%), Gaps = 5/296 (1%)
 Frame = +2

Query: 77  WFLGKVLDPRASWIQEWNRVFLLVCATGLFVDPLFFYALSINEACMCLFVDGWFAITITV 256
           W LG+VLDPRA W+QEWNR FLLVCATGLFVDPLFFYALS+++ CMCLF+DGWFA+T+T 
Sbjct: 66  WSLGQVLDPRAKWVQEWNRGFLLVCATGLFVDPLFFYALSVSDTCMCLFIDGWFALTVTA 125

Query: 257 LRSMTDALHLWNMWLQLKINKHPH---AVNAD--ERSHPLDTSSRTVAMRYLKAKKGFFF 421
           LR MTDALH+WNMWLQLK+ K P     +  D  +RS P  +S  +VA+RYLKAKKGFFF
Sbjct: 126 LRCMTDALHVWNMWLQLKMAKKPSIGGGIGGDYGDRSGPRFSSPSSVALRYLKAKKGFFF 185

Query: 422 DXXXXXXXXXXXXXXXXXALLEKGSTTEVMTIFLVLFLFQYLPKIYHSVYLLRRMQNLSG 601
           D                 +LLE GS T VMTIFL++FLFQYLPKIYHSV LLRRMQNLSG
Sbjct: 186 DLFVILPLPQIILWVAIPSLLEGGSVTVVMTIFLIIFLFQYLPKIYHSVCLLRRMQNLSG 245

Query: 602 YIFGTVWWGIALNLIAYFVASHAVGACWYLLGIQRATKCLTEQCMKAQSNCGLKFLACEK 781
           YIFGTVWWGIALN+IAYFVASHA GACWYLLGIQR  KCL E+C + Q  CGL+ L+C++
Sbjct: 246 YIFGTVWWGIALNMIAYFVASHAAGACWYLLGIQRTAKCLKEKCRETQ-GCGLRLLSCKE 304

Query: 782 NIFYGGSCMARDSRRLLWEENREARSMCLLADDKFGYGAYKWTVQLVINDSRLEKI 949
            I+YG +   RD  RL W +N+ AR+ CL + D + YGAYKWTVQLV N SRLEKI
Sbjct: 305 PIYYGTASKVRDGARLAWADNKVARATCLDSSDNYDYGAYKWTVQLVTNGSRLEKI 360


>ref|XP_003634689.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Vitis
           vinifera]
          Length = 667

 Score =  398 bits (1022), Expect = e-108
 Identities = 190/289 (65%), Positives = 218/289 (75%)
 Frame = +2

Query: 83  LGKVLDPRASWIQEWNRVFLLVCATGLFVDPLFFYALSINEACMCLFVDGWFAITITVLR 262
           L +VLDPRA W+QEWNRVFLLVCATGLFVDPLFFY LSIN  CMCLFVDGWFAIT+T LR
Sbjct: 53  LSRVLDPRAKWVQEWNRVFLLVCATGLFVDPLFFYVLSINSTCMCLFVDGWFAITVTALR 112

Query: 263 SMTDALHLWNMWLQLKINKHPHAVNADERSHPLDTSSRTVAMRYLKAKKGFFFDXXXXXX 442
            MTDALHLWNMWLQLK+ K    V  +E S   D S+ TVA+RYLKAKKGFFFD      
Sbjct: 113 CMTDALHLWNMWLQLKMAKRTFHVVGEEGSRLHDASASTVALRYLKAKKGFFFDLFVILP 172

Query: 443 XXXXXXXXXXXALLEKGSTTEVMTIFLVLFLFQYLPKIYHSVYLLRRMQNLSGYIFGTVW 622
                      +LLE+G TT VMT+ L++FLFQYLPKIYHSV LL RMQN+SGYIFGT+W
Sbjct: 173 LPQIVLWVAIPSLLERGLTTTVMTVLLIIFLFQYLPKIYHSVCLLLRMQNVSGYIFGTIW 232

Query: 623 WGIALNLIAYFVASHAVGACWYLLGIQRATKCLTEQCMKAQSNCGLKFLACEKNIFYGGS 802
           WGI LN+IAYFVASHA GACWYLLG+QRA KCL E+C  A + C  K LAC+  I+YG +
Sbjct: 233 WGIVLNMIAYFVASHAAGACWYLLGLQRAAKCLKEECAVA-NYCSTKTLACKNPIYYGTT 291

Query: 803 CMARDSRRLLWEENREARSMCLLADDKFGYGAYKWTVQLVINDSRLEKI 949
            + +D  RL W  N+ ARS CL + D F YG Y+WT+QLV ND+RLEKI
Sbjct: 292 SLLKDRARLAWANNKHARSTCLDSADNFEYGGYRWTIQLVTNDNRLEKI 340


>ref|XP_002330420.1| predicted protein [Populus trichocarpa] gi|222871805|gb|EEF08936.1|
           predicted protein [Populus trichocarpa]
          Length = 635

 Score =  394 bits (1012), Expect = e-107
 Identities = 194/305 (63%), Positives = 224/305 (73%), Gaps = 4/305 (1%)
 Frame = +2

Query: 47  GSNSKRSNKLWFLGKVLDPRASWIQEWNRVFLLVCATGLFVDPLFFYALSINEACMCLFV 226
           G  SKR    W LG+VLDPR  W+QEWNRVFLLVCATGLFVDPLFFY LSI++ CMCLFV
Sbjct: 7   GGGSKRRG--WSLGQVLDPRGKWVQEWNRVFLLVCATGLFVDPLFFYVLSISDTCMCLFV 64

Query: 227 DGWFAITITVLRSMTDALHLWNMWLQLKINKHPHAVNAD----ERSHPLDTSSRTVAMRY 394
           DGWFAIT+T LR MTD L+LWNMWLQLKI K PH         ER         + A+RY
Sbjct: 65  DGWFAITVTALRCMTDVLYLWNMWLQLKIAKRPHGGGESGGDGERGGSRVAGPCSSALRY 124

Query: 395 LKAKKGFFFDXXXXXXXXXXXXXXXXXALLEKGSTTEVMTIFLVLFLFQYLPKIYHSVYL 574
           LKAKKGFFFD                 +LL+KGS T +M +FL++FLFQYLPKI++SV L
Sbjct: 125 LKAKKGFFFDLFVILPLPQIVLWVGIPSLLQKGSVTLLMNVFLIIFLFQYLPKIHYSVCL 184

Query: 575 LRRMQNLSGYIFGTVWWGIALNLIAYFVASHAVGACWYLLGIQRATKCLTEQCMKAQSNC 754
           LRRMQ+LSGYIFGTVWWGIALN+IAYFVASHA GACWYLLGIQRA KCL EQC++    C
Sbjct: 185 LRRMQSLSGYIFGTVWWGIALNMIAYFVASHAAGACWYLLGIQRAAKCLKEQCIET-PGC 243

Query: 755 GLKFLACEKNIFYGGSCMARDSRRLLWEENREARSMCLLADDKFGYGAYKWTVQLVINDS 934
           GL  L+C++ I+YG +    +  R  W +N+ ARSMCL + DK+ YGAYKWTVQLV NDS
Sbjct: 244 GLGLLSCKEPIYYGTTRKVMEKARWAWADNKLARSMCLDSPDKYDYGAYKWTVQLVTNDS 303

Query: 935 RLEKI 949
           RLEKI
Sbjct: 304 RLEKI 308


>ref|XP_003539580.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Glycine max]
          Length = 683

 Score =  379 bits (973), Expect = e-103
 Identities = 186/288 (64%), Positives = 215/288 (74%), Gaps = 2/288 (0%)
 Frame = +2

Query: 92  VLDPRASWIQEWNRVFLLVCATGLFVDPLFFYALSINEACMCLFVDGWFAITITVLRSMT 271
           VLDPR  W+QEWNRVFLLVCATGLFVDPLFFYALSI++ CMCLFVDGW  IT+T LR MT
Sbjct: 70  VLDPRGKWVQEWNRVFLLVCATGLFVDPLFFYALSISDTCMCLFVDGWLVITVTALRCMT 129

Query: 272 DALHLWNMWLQLKINKHPHA-VNADER-SHPLDTSSRTVAMRYLKAKKGFFFDXXXXXXX 445
           DALH+WNMWL+ K+ K   + +  D   S          A+RYLKAK+GFFFD       
Sbjct: 130 DALHVWNMWLEFKMAKRSSSFIGRDTNASGGGGGGGGGYALRYLKAKRGFFFDLFVILPI 189

Query: 446 XXXXXXXXXXALLEKGSTTEVMTIFLVLFLFQYLPKIYHSVYLLRRMQNLSGYIFGTVWW 625
                      LL+KGS T V+T+FL++FLFQYLPKIYHSV LLRRMQ+LSGYI GTVWW
Sbjct: 190 PQIVLWVTIPFLLKKGSITLVVTVFLIMFLFQYLPKIYHSVCLLRRMQDLSGYISGTVWW 249

Query: 626 GIALNLIAYFVASHAVGACWYLLGIQRATKCLTEQCMKAQSNCGLKFLACEKNIFYGGSC 805
           GIALNLIAYFVASHA GACWYLLG+QRA KCL EQC K  + CGL+ L C++ I+YGG  
Sbjct: 250 GIALNLIAYFVASHAAGACWYLLGLQRAAKCLEEQCAKT-TGCGLRTLCCKEPIYYGGIN 308

Query: 806 MARDSRRLLWEENREARSMCLLADDKFGYGAYKWTVQLVINDSRLEKI 949
           + RD  RLLW +NREARS CL + D + YG Y+W+VQLV NDSRLEKI
Sbjct: 309 IVRDKTRLLWAQNREARSTCLDSADNYDYGVYEWSVQLVTNDSRLEKI 356


>ref|XP_003526201.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Glycine max]
          Length = 691

 Score =  378 bits (970), Expect = e-102
 Identities = 186/300 (62%), Positives = 218/300 (72%), Gaps = 11/300 (3%)
 Frame = +2

Query: 83  LGKVLDPRASWIQEWNRVFLLVCATGLFVDPLFFYALSINEACMCLFVDGWFAITITVLR 262
           LG+VLDPRA W+QEWNRVFLLVCA GLFVDPLFFYALS++++CMC+FVDGW A+T+TVLR
Sbjct: 66  LGRVLDPRAKWVQEWNRVFLLVCAAGLFVDPLFFYALSVSDSCMCVFVDGWLAVTVTVLR 125

Query: 263 SMTDALHLWNMWLQLKINKHPHAVNADERSHPLDTSS----------RTVAMRYLKAKKG 412
            MTDALH+WNM ++ K+ K    + A   S    TSS          R+VAM YL ++ G
Sbjct: 126 CMTDALHVWNMVIRCKMAKRTFGLGASTTSSGRGTSSSSVGLRDTRPRSVAMGYLMSRTG 185

Query: 413 FFFDXXXXXXXXXXXXXXXXXALLEKGSTTEVMTIFLVLFLFQYLPKIYHSVYLLRRMQN 592
           FFFD                 +LLEKGS T VMT+FL++FLFQYLPKI+HSV  LRR QN
Sbjct: 186 FFFDLFVILPLPQIVLWVAIPSLLEKGSVTLVMTVFLIIFLFQYLPKIFHSVCHLRRTQN 245

Query: 593 LSGYIFGTVWWGIALNLIAYFVASHAVGACWYLLGIQRATKCLTEQCMKAQSNCGLKFLA 772
           LSGYIFGTVWWGIALN+IAYFVASHA GACWYLLGIQRA KCL  QC K  S CG+K L+
Sbjct: 246 LSGYIFGTVWWGIALNMIAYFVASHAAGACWYLLGIQRAAKCLKVQCEKT-SGCGMKILS 304

Query: 773 CEKNIFYG-GSCMARDSRRLLWEENREARSMCLLADDKFGYGAYKWTVQLVINDSRLEKI 949
           C+  I+YG  S + RD  RL W ENRE R  CL   D + YGAY+W+VQLV ND+RLEKI
Sbjct: 305 CQTPIYYGSNSFLVRDRARLAWAENREVRHTCLNGPDNYNYGAYRWSVQLVTNDNRLEKI 364


Top