BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012658
         (810 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313690.1| f-box family protein [Populus trichocarpa] g...   249   5e-64
ref|XP_002305539.1| f-box family protein [Populus trichocarpa] g...   245   1e-62
ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protei...   241   2e-61
ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumi...   226   4e-57
ref|XP_004140043.1| PREDICTED: F-box protein SKIP23-like [Cucumi...   226   4e-57

>ref|XP_002313690.1| f-box family protein [Populus trichocarpa]
           gi|222850098|gb|EEE87645.1| f-box family protein
           [Populus trichocarpa]
          Length = 410

 Score =  249 bits (636), Expect = 5e-64
 Identities = 130/271 (47%), Positives = 180/271 (66%), Gaps = 3/271 (1%)
 Frame = -2

Query: 809 SIFRIQLPQTCDSQS--PWIIKLDQDNPSKCRLVNPLSRDEFKPLSSNFPNVLDLFGFRV 636
           SIF I LP + +      W++K+++D P K  L +PLSR     L  + P VLDL   R+
Sbjct: 72  SIFLIGLPNSHNQTDLQGWLVKIEEDVPGKKHLFDPLSRCRSTSLHHSLPRVLDLMNLRI 131

Query: 635 WELGQEFTLQYVNYRPFATSIGDAGNLYSEKVAFCDVG-DNVYYILTIHVSGRLALLKSG 459
            ELG E+ L +V+Y+P ++S  DAGNLY EKV    +  +  + +LTIHVSG+LA+ KSG
Sbjct: 132 RELGHEYVLHHVSYKPNSSSFTDAGNLYMEKVVMIWLNCETEFVLLTIHVSGKLAMFKSG 191

Query: 458 DLKWTVIDDMPAPYDDVIFHGGCFYAVDSTGRTXXXXXXXXXXXXXXVADSVFGGDKKML 279
           D +WT+I++MP+P+DDVI + G FYAVD+TGRT                D VFGGDKK L
Sbjct: 192 DKRWTIINEMPSPFDDVIVYKGRFYAVDNTGRTVVVALDTDLGLV---GDPVFGGDKKYL 248

Query: 278 VDCCGELFMADKYLSVGPEDDLGSDEGLDFYEEFDCYMSERTMRFEVFKLDRSGEKWVKV 99
           V+  G+L + D YLS+  + D G   G D  ++   YMSERT+RF+VFKL+  G+ W++V
Sbjct: 249 VESKGDLLLVDMYLSI--DTDEGLSIGNDVVQDLVQYMSERTVRFKVFKLNEEGKSWIEV 306

Query: 98  ESLGDKIIFLGDNCAFSASASDLSGCKGNCI 6
           ++L D+++FLGD+  FSASAS+LSGCKGNCI
Sbjct: 307 KNLEDRVLFLGDDSTFSASASELSGCKGNCI 337


>ref|XP_002305539.1| f-box family protein [Populus trichocarpa]
           gi|222848503|gb|EEE86050.1| f-box family protein
           [Populus trichocarpa]
          Length = 469

 Score =  245 bits (625), Expect = 1e-62
 Identities = 129/272 (47%), Positives = 179/272 (65%), Gaps = 4/272 (1%)
 Frame = -2

Query: 809 SIFRIQLPQT---CDSQSPWIIKLDQDNPSKCRLVNPLSRDEFKPLSSNFPNVLDLFGFR 639
           ++F + LP +    D+Q  W+IK+++D P K  L +PLSR     L +N P VLDL   R
Sbjct: 72  TVFLVGLPNSHNQTDTQG-WLIKIEEDVPGKKHLFDPLSRCRSTSLPNNLPRVLDLMNLR 130

Query: 638 VWELGQEFTLQYVNYRPFATSIGDAGNLYSEKVAFCDVGD-NVYYILTIHVSGRLALLKS 462
           + ELG E+ L ++NY+P ++S  DAGNLY EKV    +     + +LTIHVSG+LA+ KS
Sbjct: 131 IRELGHEYVLHHLNYKPNSSSFTDAGNLYMEKVVMIWLNSLTEFVLLTIHVSGKLAIFKS 190

Query: 461 GDLKWTVIDDMPAPYDDVIFHGGCFYAVDSTGRTXXXXXXXXXXXXXXVADSVFGGDKKM 282
           GD +WT+I++MP+P+DDVI + G FYAVD+TGRT                + VFGGDKK 
Sbjct: 191 GDKRWTIINEMPSPFDDVIVYKGRFYAVDNTGRTVVVAMDTNLGLV---GNPVFGGDKKY 247

Query: 281 LVDCCGELFMADKYLSVGPEDDLGSDEGLDFYEEFDCYMSERTMRFEVFKLDRSGEKWVK 102
           LV+  G+L + D YLS+  + D G   G D  ++   YMSERT+ F+VFKL+  G+ W++
Sbjct: 248 LVESKGDLLLVDMYLSI--DSDEGLSIGHDVVQDLVQYMSERTVWFKVFKLNEEGKCWIE 305

Query: 101 VESLGDKIIFLGDNCAFSASASDLSGCKGNCI 6
           V  L D+++FLGD+  FSASAS+LSGCKGNCI
Sbjct: 306 VNDLEDRVLFLGDDLTFSASASELSGCKGNCI 337


>ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP23-like [Vitis
           vinifera]
          Length = 387

 Score =  241 bits (614), Expect = 2e-61
 Identities = 126/271 (46%), Positives = 176/271 (64%), Gaps = 3/271 (1%)
 Frame = -2

Query: 809 SIFRIQLPQTCDSQSP--WIIKLDQDNPSKCRLVNPLSRDEFKPLSSNFPNVLDLFGFRV 636
           SI ++ LP +    +P  W+IK+++D     RL+NPL+  +F+ L  +FP   D  G RV
Sbjct: 71  SILQLGLPDSRAQTTPNSWLIKIEEDPSGVIRLINPLTTFKFRHLPPDFPKTFDFSGLRV 130

Query: 635 WELGQEFTLQYVNYRPFATSIGDAGNLYSEKVAFCDVGDNVYYILTIHVSGRLALLKSGD 456
           +ELGQE+ L+Y++YRP   +    G+LY EKVAFC    + +++LTIH+SG+LA+ +SGD
Sbjct: 131 FELGQEYVLEYMDYRPPGNAY--LGSLYMEKVAFCSGNGDDFWLLTIHLSGKLAMFRSGD 188

Query: 455 LKWTVIDDMPAPYDDVIFHGGCFYAVDSTGRT-XXXXXXXXXXXXXXVADSVFGGDKKML 279
            KW +IDDM +PYDDVIF  G FYAVD+TGRT                A SVFGGDKK+L
Sbjct: 189 KKWMIIDDMQSPYDDVIFFDGKFYAVDNTGRTVVVDVADGSSPVVNLAASSVFGGDKKVL 248

Query: 278 VDCCGELFMADKYLSVGPEDDLGSDEGLDFYEEFDCYMSERTMRFEVFKLDRSGEKWVKV 99
           V+  GEL + D Y ++  +DD           E   +M ER + F+VF+LD+  +KWV++
Sbjct: 249 VESEGELLLVDTYFTMYHDDD-----------EHVRWMIERMIHFKVFRLDQREQKWVEI 297

Query: 98  ESLGDKIIFLGDNCAFSASASDLSGCKGNCI 6
           ESLGD+++FLGD+ +FSA ASD  GCKGN I
Sbjct: 298 ESLGDRLLFLGDDSSFSARASDFYGCKGNSI 328


>ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
          Length = 458

 Score =  226 bits (577), Expect = 4e-57
 Identities = 124/271 (45%), Positives = 171/271 (63%), Gaps = 3/271 (1%)
 Frame = -2

Query: 809 SIFRIQLPQTCDSQSPWIIKLDQDNPSKCRLVNPLSRDEFKPLSSNFPNVLDLFGFRVWE 630
           SIFR+  P   D    W+IK+++D     ++ NPLS+  FKPL  NFP VL+L  F V E
Sbjct: 71  SIFRVGSPM--DHSDGWLIKVEEDACGMIKISNPLSKSYFKPLPKNFPKVLNLLNFPVLE 128

Query: 629 LGQEFTLQYVNYRPFATSIGDAGNLYSEKVAF--CDVGDNVYYILTIHVSGRLALLKSGD 456
           L QE+ L Y+N+ P     GDAG+LY EK+A+   +   + + ++TIHVSG+LA+ KS D
Sbjct: 129 LCQEYVLHYLNFWPVRHRPGDAGDLYREKIAYKCLNYDGSQFVLVTIHVSGKLAMFKSED 188

Query: 455 LKWTVIDDMPAPYDDVIFHGGCFYAVDSTGRTXXXXXXXXXXXXXXVADSVFGGDKKMLV 276
            +W+ I     PYDDVI   G FYAVD++G T              +A+ VFGGDKK+L+
Sbjct: 189 GQWSTIHHTALPYDDVILFNGEFYAVDNSGAT---FLVESQHKVTLIAEPVFGGDKKILM 245

Query: 275 DCCGELFMADKYLSVGPEDDLGSDEGLDFYEEFDCYMSERTMRFEVFKLDRSG-EKWVKV 99
           +C GEL + D YL+V  E+  G D      E  +  + E+T+ F+VFKL R+G +KW  V
Sbjct: 246 ECNGELLLVDMYLTVDSEEGFGLDG-----EPTEGVLHEKTVGFKVFKLHRNGSKKWTVV 300

Query: 98  ESLGDKIIFLGDNCAFSASASDLSGCKGNCI 6
             LG+ ++FLG+NC+FSASAS +SGCKGNCI
Sbjct: 301 CDLGNTMLFLGENCSFSASASGVSGCKGNCI 331


>ref|XP_004140043.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
          Length = 404

 Score =  226 bits (577), Expect = 4e-57
 Identities = 124/271 (45%), Positives = 171/271 (63%), Gaps = 3/271 (1%)
 Frame = -2

Query: 809 SIFRIQLPQTCDSQSPWIIKLDQDNPSKCRLVNPLSRDEFKPLSSNFPNVLDLFGFRVWE 630
           SIFR+  P   D    W+IK+++D     ++ NPLS+  FKPL  NFP VL+L  F V E
Sbjct: 71  SIFRVGSPM--DHSDGWLIKVEEDACGMIKISNPLSKSYFKPLPKNFPKVLNLLNFPVLE 128

Query: 629 LGQEFTLQYVNYRPFATSIGDAGNLYSEKVAF--CDVGDNVYYILTIHVSGRLALLKSGD 456
           L QE+ L Y+N+ P     GDAG+LY EK+A+   +   + + ++TIHVSG+LA+ KS D
Sbjct: 129 LCQEYVLHYLNFWPVRHRPGDAGDLYREKIAYKCLNYDGSQFVLVTIHVSGKLAMFKSED 188

Query: 455 LKWTVIDDMPAPYDDVIFHGGCFYAVDSTGRTXXXXXXXXXXXXXXVADSVFGGDKKMLV 276
            +W+ I     PYDDVI   G FYAVD++G T              +A+ VFGGDKK+L+
Sbjct: 189 GQWSTIHHTALPYDDVILFNGEFYAVDNSGAT---FLVESQHKVTLIAEPVFGGDKKILM 245

Query: 275 DCCGELFMADKYLSVGPEDDLGSDEGLDFYEEFDCYMSERTMRFEVFKLDRSG-EKWVKV 99
           +C GEL + D YL+V  E+  G D      E  +  + E+T+ F+VFKL R+G +KW  V
Sbjct: 246 ECNGELLLVDMYLTVDSEEGFGLDG-----EPTEGVLHEKTVGFKVFKLHRNGSKKWTVV 300

Query: 98  ESLGDKIIFLGDNCAFSASASDLSGCKGNCI 6
             LG+ ++FLG+NC+FSASAS +SGCKGNCI
Sbjct: 301 CDLGNTMLFLGENCSFSASASGVSGCKGNCI 331