BLASTX nr result

ID: Bupleurum21_contig00012637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012637
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283706.1| PREDICTED: dof zinc finger protein DOF5.2-li...    99   2e-27
ref|XP_002531852.1| zinc finger protein, putative [Ricinus commu...    95   4e-27
gb|ACU80551.1| Dof3 protein [Jatropha curcas]                          93   6e-24
ref|XP_002306032.1| predicted protein [Populus trichocarpa] gi|2...    97   6e-24
ref|XP_004168502.1| PREDICTED: dof zinc finger protein DOF5.2-li...    93   6e-23

>ref|XP_002283706.1| PREDICTED: dof zinc finger protein DOF5.2-like [Vitis vinifera]
          Length = 511

 Score = 98.6 bits (244), Expect(2) = 2e-27
 Identities = 47/65 (72%), Positives = 54/65 (83%)
 Frame = +1

Query: 1   GPNSPTLGKHSRDENMPNLTNSLDEVSIKEHIPEKNLWVPKTLRIDDPGEAAKSSIWATL 180
           GPNSPTLGKHSRDENM   +N  +E   KE+  E+ LW+PKTLRIDDPGEAA+SSIWATL
Sbjct: 399 GPNSPTLGKHSRDENMLKASNFGEEELQKENNSERCLWIPKTLRIDDPGEAARSSIWATL 458

Query: 181 GIKNE 195
           GIKN+
Sbjct: 459 GIKND 463



 Score = 49.3 bits (116), Expect(2) = 2e-27
 Identities = 22/39 (56%), Positives = 33/39 (84%)
 Frame = +3

Query: 303 MFKSFQSKDNERCHLSKSSSVLHANPAAMSRSQSFRETT 419
           +FKSFQSK +E+ H++++S VL ANPAA+SRS +F E++
Sbjct: 473 LFKSFQSKADEKNHIAETSPVLQANPAALSRSLNFHESS 511


>ref|XP_002531852.1| zinc finger protein, putative [Ricinus communis]
           gi|223528502|gb|EEF30530.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 497

 Score = 95.1 bits (235), Expect(2) = 4e-27
 Identities = 47/65 (72%), Positives = 52/65 (80%)
 Frame = +1

Query: 1   GPNSPTLGKHSRDENMPNLTNSLDEVSIKEHIPEKNLWVPKTLRIDDPGEAAKSSIWATL 180
           GPNSPTLGKHSRD+NM   +NS  E   KE   E+ LW+PKTLRIDDPGEAAKSSIW TL
Sbjct: 386 GPNSPTLGKHSRDDNMLKPSNS-GETPEKEKSAERCLWIPKTLRIDDPGEAAKSSIWTTL 444

Query: 181 GIKNE 195
           GIKN+
Sbjct: 445 GIKND 449



 Score = 51.6 bits (122), Expect(2) = 4e-27
 Identities = 23/39 (58%), Positives = 33/39 (84%)
 Frame = +3

Query: 303 MFKSFQSKDNERCHLSKSSSVLHANPAAMSRSQSFRETT 419
           +FK+F+SK NE+ H +++SSVL ANPAA+SRS  FRE++
Sbjct: 459 LFKAFESKGNEKNHAAETSSVLQANPAALSRSLKFRESS 497


>gb|ACU80551.1| Dof3 protein [Jatropha curcas]
          Length = 518

 Score = 92.8 bits (229), Expect(2) = 6e-24
 Identities = 45/65 (69%), Positives = 52/65 (80%)
 Frame = +1

Query: 1   GPNSPTLGKHSRDENMPNLTNSLDEVSIKEHIPEKNLWVPKTLRIDDPGEAAKSSIWATL 180
           GPNSPTLGKHSRDEN+    NS +E   KE+  E+ +W+PKTLRIDDPGEAAKSSIW TL
Sbjct: 407 GPNSPTLGKHSRDENVQKPNNSGEEPG-KENNAERCIWIPKTLRIDDPGEAAKSSIWTTL 465

Query: 181 GIKNE 195
           GI N+
Sbjct: 466 GITND 470



 Score = 43.5 bits (101), Expect(2) = 6e-24
 Identities = 19/38 (50%), Positives = 31/38 (81%)
 Frame = +3

Query: 303 MFKSFQSKDNERCHLSKSSSVLHANPAAMSRSQSFRET 416
           +FK+F+SK +E+   +++S +L+ANPAA+SRS  FRE+
Sbjct: 480 LFKAFESKGDEKHRTTEASPLLNANPAALSRSLKFRES 517


>ref|XP_002306032.1| predicted protein [Populus trichocarpa] gi|222848996|gb|EEE86543.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score = 97.4 bits (241), Expect(2) = 6e-24
 Identities = 47/65 (72%), Positives = 53/65 (81%)
 Frame = +1

Query: 1   GPNSPTLGKHSRDENMPNLTNSLDEVSIKEHIPEKNLWVPKTLRIDDPGEAAKSSIWATL 180
           GPNSPTLGKHSRDENM   +NS +  S KE+  E+ LW+PKTLRI DPGEAAKSSIW TL
Sbjct: 389 GPNSPTLGKHSRDENMLKSSNSEEGESAKENNTERCLWIPKTLRIVDPGEAAKSSIWTTL 448

Query: 181 GIKNE 195
           GIKN+
Sbjct: 449 GIKND 453



 Score = 38.9 bits (89), Expect(2) = 6e-24
 Identities = 20/39 (51%), Positives = 30/39 (76%)
 Frame = +3

Query: 303 MFKSFQSKDNERCHLSKSSSVLHANPAAMSRSQSFRETT 419
           +FK+F SK  E+ H +++S VL ANPAA+SRS  F+E++
Sbjct: 463 LFKAFDSKV-EKNHEAETSPVLQANPAALSRSLKFQESS 500


>ref|XP_004168502.1| PREDICTED: dof zinc finger protein DOF5.2-like [Cucumis sativus]
          Length = 502

 Score = 92.8 bits (229), Expect(2) = 6e-23
 Identities = 44/64 (68%), Positives = 52/64 (81%)
 Frame = +1

Query: 4   PNSPTLGKHSRDENMPNLTNSLDEVSIKEHIPEKNLWVPKTLRIDDPGEAAKSSIWATLG 183
           PNSPTLGKHSRDEN+   ++  ++   K+   EK LW+PKTLRIDDPGEAAKSSIWATLG
Sbjct: 391 PNSPTLGKHSRDENVTKQSDFGEDEQQKDTKTEKCLWIPKTLRIDDPGEAAKSSIWATLG 450

Query: 184 IKNE 195
           IKN+
Sbjct: 451 IKND 454



 Score = 40.0 bits (92), Expect(2) = 6e-23
 Identities = 20/40 (50%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
 Frame = +3

Query: 303 MFKSFQSKD-NERCHLSKSSSVLHANPAAMSRSQSFRETT 419
           +FK+FQSK  +E+ H +++S VL  NPAA+SRS  F E++
Sbjct: 463 LFKAFQSKKIDEKNHKTEASPVLQVNPAALSRSIKFHESS 502


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