BLASTX nr result
ID: Bupleurum21_contig00012631
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00012631
(1962 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002516857.1| conserved hypothetical protein [Ricinus comm... 328 3e-87
emb|CAN84155.1| hypothetical protein VITISV_029853 [Vitis vinifera] 306 2e-80
ref|XP_002311805.1| chromatin remodeling complex subunit [Populu... 285 4e-74
emb|CBI26124.3| unnamed protein product [Vitis vinifera] 246 1e-62
ref|XP_003609575.1| Helicase swr1 [Medicago truncatula] gi|35551... 231 5e-58
>ref|XP_002516857.1| conserved hypothetical protein [Ricinus communis]
gi|223543945|gb|EEF45471.1| conserved hypothetical
protein [Ricinus communis]
Length = 3502
Score = 328 bits (841), Expect = 3e-87
Identities = 234/556 (42%), Positives = 292/556 (52%), Gaps = 24/556 (4%)
Frame = +3
Query: 99 NVELEAAKFLQKLIQESKDEPTKLATKLHVILKHMRSSGKENSMPYQVISRAMETVINQH 278
NVELEAAKFLQKLI++S DEP KLATKL+VIL HM+ SGKE+S+PYQVISRAMETVI+QH
Sbjct: 9 NVELEAAKFLQKLIRDSTDEPEKLATKLYVILDHMKRSGKEHSLPYQVISRAMETVISQH 68
Query: 279 GLDINALMSSHIPSTTGTQVVDSASSQYGGSSLRGAVAMEANTSLVSNDITKSDSYASNR 458
GLD+ AL+ S + ST GTQ+ DSA GSS VA ++ L N+I++SD +AS+R
Sbjct: 69 GLDVEALI-SRLASTDGTQLGDSA-----GSSQAAGVAQDSKVGLAENEISESDPFASSR 122
Query: 459 PPVGPSFAGHDIYQGSASQLNSKTLDHESPSSFDTRSAKSHSEESRDPPXXXXXXXXXXX 638
PPVGPS AG D YQG + +S++ DHESPSS DTRSA S S+E
Sbjct: 123 PPVGPSGAGQDYYQGPGTHRSSQSFDHESPSSLDTRSANSQSQE--------RGANQKDG 174
Query: 639 XXXXXXXXXADPSSNSESQYGNIQPLESSTFNSGMDKAAT-MIDQPRSISIQGGEHAQFH 815
D S SES N Q ++ + KA T ID S +GGE+A F
Sbjct: 175 KKAAAKRKRGDSSLPSESHTDNPQQHDARSGVVNQRKAKTNKIDSAGSFPARGGENAGF- 233
Query: 816 NMVQSSSTMDHNAMRSTLRAKQDIQHATEKSLDSTNISNSLSRTLHSRHPEEVEVSSTHN 995
NMV S +D VSS H
Sbjct: 234 NMVPGSCHLD--------------------------------------------VSSAHI 249
Query: 996 GLSRQQGVSLPVAHDVLNTRGVWNQTKIGSPFENSQYPRFSFHT-GGDSSGETLLHQ--- 1163
+ QQGVSLP AH+ L++R WNQ K G P E SQ PRFS ++ G+ E L Q
Sbjct: 250 P-AGQQGVSLPSAHENLSSRTAWNQNKTGLPLERSQVPRFSSNSLSGNMMAEVPLQQPTT 308
Query: 1164 ---SSGTAGEVNGMSTGTSVPYAAAP-GFPGPVQFSDT------YNNPSLRPKMHKDSNL 1313
+G +V+G S Y+ GF G V F + S+ K
Sbjct: 309 SSLGAGPISKVHGGMPIISSSYSMGELGFSGQVPFGSSEFLKHGLAKGSVSSPSEKTMEA 368
Query: 1314 EQLSSASAIDLPSDKGAFGKALEHEGGSLHASGNDNSIVQSGMLNNVTEMALLRNT---- 1481
+ DLP +E++GGS + + N I+Q G NN +EM +LR T
Sbjct: 369 HFSPTNRVDDLPPSLST--GRMENDGGSSNIFADANKIIQGGRQNNNSEMTMLRGTTPRD 426
Query: 1482 -GKLPVSQSSSASIMPFKEQHLKQLRAQCLVYLAFRNGLKPKKLHLDFALGNFISKD--- 1649
GK VSQ + PFK+Q LKQLRAQCLV+LAFRNGL PKKLHL+ ALGN KD
Sbjct: 427 MGKFVVSQPGN----PFKDQQLKQLRAQCLVFLAFRNGLVPKKLHLELALGNIFPKDGSN 482
Query: 1650 -EGLSKEMIDQKVKEQ 1694
EG +E+ID + K Q
Sbjct: 483 SEGPRRELIDHRGKAQ 498
>emb|CAN84155.1| hypothetical protein VITISV_029853 [Vitis vinifera]
Length = 771
Score = 306 bits (783), Expect = 2e-80
Identities = 222/602 (36%), Positives = 297/602 (49%), Gaps = 54/602 (8%)
Frame = +3
Query: 84 MAAPPNVELEAAKFLQKLIQESKDEPTKLATKLHVILKHMRSSGKENSMPYQVISRAMET 263
MA+ NVELEAAKFL KLIQ+S DEP KLATKL+VIL+HM+SSGKE+SMPYQVISRAMET
Sbjct: 1 MASQQNVELEAAKFLHKLIQDSTDEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMET 60
Query: 264 VINQHGLDINALMSSHIPSTTGTQVVDSASSQYGGSSLRGAVAMEANTSLVSNDITKSDS 443
VINQHGLDI AL SS +PS+ GT V DS++++ GSS VA + L N++ K D+
Sbjct: 61 VINQHGLDIEALKSSRLPSSGGTHVGDSSAARLAGSSSAAGVAKDTQAGLAENEMAKIDA 120
Query: 444 YASNRPPVGPSFAGHDIYQGSASQLNSKTLDHESPS-SFDTRSAKSHSEESRDPPXXXXX 620
+AS+RPPVGPS AGHDIYQGS S H+S SFD S S S
Sbjct: 121 FASSRPPVGPSSAGHDIYQGSVS--------HKSGGKSFDHESPSSLDTRS--------- 163
Query: 621 XXXXXXXXXXXXXXXADPSSNSESQYGNIQPLESSTFNSGMDKAATMIDQPRSISIQGGE 800
+NS+SQ + +
Sbjct: 164 -------------------ANSQSQ-------------------------------ERRD 173
Query: 801 HAQFHNMVQSSSTMDHNAMRSTLRAKQDIQHATEKSLDSTNISNSLSRTLHSRHPEEVEV 980
A + V + NA R + D A E +D+ N ++ + ++ R + +
Sbjct: 174 SANWEKQVNQKDSKKSNAKRK----RTDPSPAMEPHVDNPNHPDTRNSVVNPRKGKLMNK 229
Query: 981 SSTHNGLSRQQGVSLPVAHDVLNTRGVWNQTKIGSPFENSQYPRFSFHTGGDSSGETLLH 1160
+ S + G + V +++ + G Q I S S L
Sbjct: 230 VESPGSFSVKSGENTNV--NIVQSTGQMEQFPISS----------------GSMRSMLRA 271
Query: 1161 QSSGTAGEVNGMSTGTSVPYAAAPGFPGPVQFS-DTYNNPSLRPKMHKDSNLEQLSS--A 1331
+ G A +++G +S P PGF +QFS +Y+N +L KMHK+ N+E S+ +
Sbjct: 272 KQEGAAAKIHG-GMPSSYP-VVEPGFSSSMQFSGSSYDNHALVAKMHKERNMEAFSAMNS 329
Query: 1332 SAIDLPSDKGA-----------------------------------------FGKALEHE 1388
S ++ S K A GK L+HE
Sbjct: 330 SLLEASSGKNAVDAEQWKHGLMRSAVIGAPEKTIEAQMLSGNHGEEESKTLSIGKVLDHE 389
Query: 1389 GGSLHASGNDNSIVQSGMLNNVTEMALLRNT-----GKLPVSQSSSASIMPFKEQHLKQL 1553
GG+ + SGN N + Q G N VTEM++LR+ GK P+ Q+ S MPFKEQHLKQL
Sbjct: 390 GGTSNTSGNANKMAQGGGANMVTEMSMLRSATFRDAGKSPIPQALPFSGMPFKEQHLKQL 449
Query: 1554 RAQCLVYLAFRNGLKPKKLHLDFALGNFISKDEGLS----KEMIDQKVKEQLIDGTSNTL 1721
RAQCLV+LA RN L PKKLHL+ ALGN K+ G++ KE+ID K K+ ++ SN
Sbjct: 450 RAQCLVFLAIRNNLMPKKLHLEIALGNIYPKEGGITDGPRKELIDHKGKDYSLNEPSNVP 509
Query: 1722 NV 1727
V
Sbjct: 510 EV 511
>ref|XP_002311805.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222851625|gb|EEE89172.1| chromatin remodeling complex
subunit [Populus trichocarpa]
Length = 3427
Score = 285 bits (728), Expect = 4e-74
Identities = 196/504 (38%), Positives = 260/504 (51%), Gaps = 24/504 (4%)
Frame = +3
Query: 255 METVINQHGLDINALMSSHIPSTTGTQVVDSASSQYGGSSLRGAVAMEANTSLVSNDITK 434
METVINQHGLDI AL SS +P T+GTQ+ DS+++QYGGSS V ++ N+I+K
Sbjct: 1 METVINQHGLDIEALRSSRLPLTSGTQMGDSSTAQYGGSSQAVGVGKDSKAGSAENEISK 60
Query: 435 SDSYASNRPPVGPSFAGHDIYQGSASQLNSKTLDHESPSSFDTRSAKSHSEESRDPPXXX 614
D++AS+RPPVGP AGHD YQGS +Q +S++ DHESPSS DTRSA S S+E
Sbjct: 61 IDTFASSRPPVGPGTAGHDYYQGSGTQRSSQSFDHESPSSLDTRSANSQSQE-------- 112
Query: 615 XXXXXXXXXXXXXXXXXADPSSNSESQYGNIQPLE-SSTFNSGMDKAATMIDQPRSISIQ 791
D S +SE N Q L +T + +D P ++
Sbjct: 113 RGVNQKDGKKAAAKRKRVDSSLHSEMHGDNPQQLNPRNTIVNPRRGKMNKVDSPGGYPVR 172
Query: 792 GGEHAQFHNMVQSSSTMDHNAMRSTLRAKQDIQHATEKSLDSTNISNSLSRTLHSRHPEE 971
GGE+ F+ + S +
Sbjct: 173 GGENTSFNKVPNSG---------------------------------------------Q 187
Query: 972 VEVSSTHNGLSRQQGVSLPVAHDVLNTRGVWNQTKIGSPFENSQYPRFSFH-TGGDSSGE 1148
+EVSS+ +QQG SLP AH+ L +RG+WNQ K G P E S PRFS + G+++ E
Sbjct: 188 LEVSSSFVSAGQQQGGSLPSAHESLTSRGMWNQNKAGLPLERSHIPRFSSNAVSGNTTAE 247
Query: 1149 TLLHQS------SGTAGEVNGMSTGTSVPYA--AAPGFPGPVQFSDTYNNPSLRPKMHKD 1304
L QS S +V+G TS P GF GPVQ+S + + K
Sbjct: 248 IQLQQSAISSLGSSAFSKVHGGMPVTSNPTGPMGELGFAGPVQYSSSEHQKHGLTKGAVA 307
Query: 1305 SNLEQLS-----SASAIDLPSDKGAFGKALEHEGGSLHASGNDNSIVQSGMLNNVTEMAL 1469
S+ E+ S +A+ +D + GK LE+ GGS + + IVQ G + +E+ +
Sbjct: 308 SSAEKTSEGHFFAANRVDDFPTSLSTGKILEN-GGSSNMFAEASKIVQGGRQTSNSELTM 366
Query: 1470 LRNT-----GKLPVSQSSSASIMPFKEQHLKQLRAQCLVYLAFRNGLKPKKLHLDFALGN 1634
+R+T GK PV Q S+ S MPF EQ L+QLRAQCLV+LAFRN L PKKLHLD ALGN
Sbjct: 367 IRSTSPRDVGKSPVFQGSALSGMPFNEQQLRQLRAQCLVFLAFRNDLMPKKLHLDIALGN 426
Query: 1635 FISKD----EGLSKEMIDQKVKEQ 1694
+SKD +G KE+ID K K Q
Sbjct: 427 AVSKDGGTLDGPRKELIDYKGKAQ 450
>emb|CBI26124.3| unnamed protein product [Vitis vinifera]
Length = 2266
Score = 246 bits (629), Expect = 1e-62
Identities = 180/519 (34%), Positives = 248/519 (47%), Gaps = 39/519 (7%)
Frame = +3
Query: 84 MAAPPNVELEAAKFLQKLIQESKDEPTKLATKLHVILKHMRSSGKENSMPYQVISRAMET 263
MA+ NVELEAAKFL KLIQ+S DEP KLATKL+VIL+HM+SSGKE+SMPYQVISRAMET
Sbjct: 1 MASQQNVELEAAKFLHKLIQDSTDEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMET 60
Query: 264 VINQHGLDINALMSSHIPSTTGTQVVDSASSQYGGSSLRGAVAMEANTSLVSNDITKSDS 443
VINQHGLDI AL SS +PS+ GT V DS++++ GSS VA + L N++ K D+
Sbjct: 61 VINQHGLDIEALKSSRLPSSGGTHVGDSSAARLAGSSSAAGVAKDTQAGLAENEMAKIDA 120
Query: 444 YASNRPPVGPSFAGHDIYQGSAS-QLNSKTLDHESPSSFDTRSAKSHSEESRDPPXXXXX 620
+AS+RPPVGPS AGHDIYQGS S + K+ DHESPSS DTRSA S S+E RD
Sbjct: 121 FASSRPPVGPSSAGHDIYQGSVSHKSGGKSFDHESPSSLDTRSANSQSQERRDSANWEKQ 180
Query: 621 XXXXXXXXXXXXXXXADPSSNSESQYGNIQ--PLESSTFNSGMDKAATMIDQPRSISIQG 794
DPS E N +S N K ++ P S S++
Sbjct: 181 VNQKDSKKSNAKRKRTDPSPAMEPHVDNPNHPDTRNSVVNPRKGKLMNKVESPGSFSVKS 240
Query: 795 GEHAQFHNMVQSSSTMDHNAMRSTLR--AKQDIQHATEKSLDSTNISNSLSRTLHSRHPE 968
G A+ H + SS + S+++ HA + + S + +
Sbjct: 241 GAAAKIHGGMPSSYPVVEPGFSSSMQFSGSSYDNHALVAKMHKERNMEAFS----AMNSS 296
Query: 969 EVEVSSTHNGLSRQQGVSLPVAHDVLNTRGVWNQTKIGSPFENSQYPRFSFHTGGDSS-- 1142
+E SS N + +Q G+ IG+P + + S + G + S
Sbjct: 297 LLEASSGKNAVDAEQW-----------KHGLMRSAVIGAPEKTIEAQMLSGNHGEEESKT 345
Query: 1143 ---GETLLHQ--SSGTAGEVNGMSTGTSVPYAAAPGFPGPVQFSDTYNNP-----SLRPK 1292
G+ L H+ +S T+G N M+ G F D +P
Sbjct: 346 LSIGKVLDHEGGTSNTSGNANKMAQGGGANMVTEMSMLRSATFRDAGKSPIPQALPFSGM 405
Query: 1293 MHKDSNLEQLSSASAIDLPSDKG----------AFGKALEHEGG--------SLHASGND 1418
K+ +L+QL + + L A G EGG + G D
Sbjct: 406 PFKEQHLKQLRAQCLVFLAIRNNLMPKKLHLEIALGNIYPKEGGITDGPRKELIDHKGKD 465
Query: 1419 NSIVQSGMLNNVT----EMALLRNTGKLPVSQSSSASIM 1523
S+ + + V ++ +R+T ++P SSS S++
Sbjct: 466 YSLNEPSNVPEVPVPFGRLSNVRDTERIPPGSSSSGSLL 504
Score = 140 bits (352), Expect = 2e-30
Identities = 94/240 (39%), Positives = 126/240 (52%), Gaps = 53/240 (22%)
Frame = +3
Query: 1167 SGTAGEVNGMSTGTSVPYAAAPGFPGPVQFS-DTYNNPSLRPKMHKDSNLEQLSS--ASA 1337
SG A +++G +S P PGF +QFS +Y+N +L KMHK+ N+E S+ +S
Sbjct: 240 SGAAAKIHG-GMPSSYP-VVEPGFSSSMQFSGSSYDNHALVAKMHKERNMEAFSAMNSSL 297
Query: 1338 IDLPSDKGA-----------------------------------------FGKALEHEGG 1394
++ S K A GK L+HEGG
Sbjct: 298 LEASSGKNAVDAEQWKHGLMRSAVIGAPEKTIEAQMLSGNHGEEESKTLSIGKVLDHEGG 357
Query: 1395 SLHASGNDNSIVQSGMLNNVTEMALLRNT-----GKLPVSQSSSASIMPFKEQHLKQLRA 1559
+ + SGN N + Q G N VTEM++LR+ GK P+ Q+ S MPFKEQHLKQLRA
Sbjct: 358 TSNTSGNANKMAQGGGANMVTEMSMLRSATFRDAGKSPIPQALPFSGMPFKEQHLKQLRA 417
Query: 1560 QCLVYLAFRNGLKPKKLHLDFALGNFISKDEGLS----KEMIDQKVKEQLIDGTSNTLNV 1727
QCLV+LA RN L PKKLHL+ ALGN K+ G++ KE+ID K K+ ++ SN V
Sbjct: 418 QCLVFLAIRNNLMPKKLHLEIALGNIYPKEGGITDGPRKELIDHKGKDYSLNEPSNVPEV 477
>ref|XP_003609575.1| Helicase swr1 [Medicago truncatula] gi|355510630|gb|AES91772.1|
Helicase swr1 [Medicago truncatula]
Length = 3310
Score = 231 bits (589), Expect = 5e-58
Identities = 177/507 (34%), Positives = 240/507 (47%), Gaps = 28/507 (5%)
Frame = +3
Query: 72 LITEMAAPPNVELEAAKFLQKLIQESKDEPTKLATKLHVILKHMRSSGKENSMPYQVISR 251
L EMA+P NVELEAAKFL KLIQ+SKDEP KLATKL+VIL+HM+SSGKE+SMPYQVISR
Sbjct: 14 LTNEMASPQNVELEAAKFLHKLIQDSKDEPVKLATKLYVILQHMKSSGKEHSMPYQVISR 73
Query: 252 AMETVINQHGLDINALMSSHIPSTTGTQVVDSASSQYGGSSLRGAVAMEANTSLVSNDIT 431
AMETVINQHGLDI AL SS +P TG + S+S GG A ++ SL ++
Sbjct: 74 AMETVINQHGLDIEALKSSRLP-LTGVPQIGSSSQAVGG-------AKDSRPSLAESEAP 125
Query: 432 KSDSYASNRPPVGPSFAGHDIYQGSASQLNSKTLDHESPSSFDTRSAKSHSEESRDPPXX 611
K + + S RPP+ P+ D YQGS +Q ++++ D ESPSS D+RSA S S++ RD
Sbjct: 126 KMEPFTSGRPPIAPTGGAPDYYQGSVAQRSNQSFDQESPSSLDSRSANSLSQDKRDTVIW 185
Query: 612 XXXXXXXXXXXXXXXXXXADPSSNSESQYGNIQPLESSTFNSGMDKAATMIDQPR-SISI 788
D +S E + +E K +P I
Sbjct: 186 DKQANQKDGKKGNTKRKRGDSTSPVEMHVDSSSLVEPRNTGVNTRKGKMTKTEPSDGIPA 245
Query: 789 QGGEHAQF-----HNMVQSSSTMDHNAMRSTLRAKQDIQHATEKSLDSTNISNSLSRTLH 953
+ GE F ++ +++ ST N M++ LRA + H K DSTNI N R +
Sbjct: 246 KSGEMTNFSVVPNNSQMENISTFSGN-MKTMLRANPEGHHLLAKQTDSTNIGNPTGRAPN 304
Query: 954 SRHPEEVEVSSTHNGLSRQQGVSLPVAHDVLNTRGVWNQTKIGSP-FENSQYPRFSFHTG 1130
S++PE++EVSS H +QQG V ++ N + + P F +S +
Sbjct: 305 SKYPEDLEVSSAHIAPGKQQGAYARVHGGMVVPA---NVSAMNEPVFSSSMQYGVPLNRD 361
Query: 1131 GDSSGETLLHQSSGTAGEVNGMSTGTSVPYAAAPGFPGPVQFSDTYNNP---SLRPKMHK 1301
G SS G N S T + P DT +P + K
Sbjct: 362 GGSSNTLADGHQISQIGRQNSGSEMTMLRQGVPP--------RDTGKSPVPAASSTMPFK 413
Query: 1302 DSNLEQLSSASAIDLPSDKG----------AFGKALEHEGGSLHASGNDNSIVQS----- 1436
++ L+QL + + L G AFG E GS S + QS
Sbjct: 414 ENQLKQLRAQCLVFLAFRNGLPPKKLHLEVAFGTFFAREDGSNKDSNDPKGKSQSFSEPG 473
Query: 1437 ---GMLNNVTEMALLRNTGKLPVSQSS 1508
G++ + LR T K P S+
Sbjct: 474 NMPGVIMPFGSSSNLRPTDKNPSGSSA 500
Score = 106 bits (264), Expect = 3e-20
Identities = 70/185 (37%), Positives = 99/185 (53%), Gaps = 12/185 (6%)
Frame = +3
Query: 1197 STGTSVPYAAAPG--FPGPVQFSDTYNNPSLRPKMHK--DSNLEQLSSASAIDLP--SDK 1358
ST P AP +P ++ S + P + + + ++ SA++ P S
Sbjct: 292 STNIGNPTGRAPNSKYPEDLEVSSAHIAPGKQQGAYARVHGGMVVPANVSAMNEPVFSSS 351
Query: 1359 GAFGKALEHEGGSLHASGNDNSIVQSGMLNNVTEMALLR------NTGKLPVSQSSSASI 1520
+G L +GGS + + + I Q G N+ +EM +LR +TGK PV +SS
Sbjct: 352 MQYGVPLNRDGGSSNTLADGHQISQIGRQNSGSEMTMLRQGVPPRDTGKSPVPAASST-- 409
Query: 1521 MPFKEQHLKQLRAQCLVYLAFRNGLKPKKLHLDFALGNFISKDEGLSKEMIDQKVKEQLI 1700
MPFKE LKQLRAQCLV+LAFRNGL PKKLHL+ A G F ++++G +K+ D K K Q
Sbjct: 410 MPFKENQLKQLRAQCLVFLAFRNGLPPKKLHLEVAFGTFFAREDGSNKDSNDPKGKSQSF 469
Query: 1701 DGTSN 1715
N
Sbjct: 470 SEPGN 474