BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012630
         (1560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002871102.1| hypothetical protein ARALYDRAFT_487239 [Arab...   203   9e-66
ref|XP_002316517.1| DNA glycosylase [Populus trichocarpa] gi|222...   199   9e-66
ref|XP_002267310.1| PREDICTED: transcriptional activator DEMETER...   197   3e-65
emb|CBI40219.3| unnamed protein product [Vitis vinifera]              197   3e-65
ref|NP_001078527.1| transcriptional activator DEMETER [Arabidops...   195   6e-65

>ref|XP_002871102.1| hypothetical protein ARALYDRAFT_487239 [Arabidopsis lyrata subsp.
            lyrata] gi|297316939|gb|EFH47361.1| hypothetical protein
            ARALYDRAFT_487239 [Arabidopsis lyrata subsp. lyrata]
          Length = 1997

 Score =  203 bits (517), Expect(2) = 9e-66
 Identities = 128/303 (42%), Positives = 176/303 (58%), Gaps = 11/303 (3%)
 Frame = +1

Query: 316  EPVIEMPGSPEHHIEESEPIDIEDLY--KDPALPDLNVTPDCPKCDDDLPIIRIN----S 477
            EP+IE P SPE    E    DIED Y  +DP               D++P I++N     
Sbjct: 1719 EPIIEEPASPEQECTEITESDIEDAYYNEDP---------------DEIPTIKLNIEQFG 1763

Query: 478  TTLDNQNGVEMSIQKGNMSQALGVPAVPSATPIPNFR----GRLQSVHQVFLLPDSHPIL 645
             TL       M +Q+G+MS+AL V   P+AT IP  +     RL++ HQV+ LPDSHP+L
Sbjct: 1764 MTLREHMERNMELQEGDMSKAL-VALNPTATSIPTPKLKNISRLRTEHQVYQLPDSHPLL 1822

Query: 646  EELQMDKRDPDDPSPYLFKPWAVLEEGSVSDRVPLGKTSDSFYCSSPQVCSEIVCSTSSF 825
            +   MDKR+PDDPSPYL   W   E  + S + P  K       +S ++C +  CS  + 
Sbjct: 1823 DG--MDKREPDDPSPYLLAIWTPGETAN-SAQPPEQKCGGK---ASGKMCFDETCSECN- 1875

Query: 826  TKNDVHSSTATVSGTLMIPVRSANNGRFPLNGTYFQINEVFADEESTQVPIIVPKHWLYN 1005
              N   +++ TV GTL+IP R+A  G FPLNGTYFQ+NE+FAD ES+  PI VP+ W+++
Sbjct: 1876 --NVREANSQTVRGTLLIPCRTAMRGSFPLNGTYFQVNELFADHESSLNPIDVPRDWIWD 1933

Query: 1006 LPRSLLYCGSSVSATFKGLSLDQISHAFNDEYYCNRGFDRKTRHTTNLSARFHIKTS-MQ 1182
            LPR  +Y G+SV++ F+GLS +QI   F   + C RGF++KTR    L AR H   S ++
Sbjct: 1934 LPRRTVYFGTSVTSIFRGLSTEQIQFCFWKGFVCVRGFEQKTRAPRPLMARLHFPASKLK 1993

Query: 1183 GNK 1191
             NK
Sbjct: 1994 NNK 1996



 Score = 75.1 bits (183), Expect(2) = 9e-66
 Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
 Frame = +2

Query: 41   DNIQKYLYPRXXXXXXXXXXXXXXXXXXFGKVYCTKINPRCNACPLSGQCKHYASLSASQ 220
            ++IQK+L+PR                  FGKV+CTK  P CNACP+ G+C+H+AS  AS 
Sbjct: 1604 ESIQKFLWPRLCKLDQPTLYELHYQLITFGKVFCTKSRPNCNACPMRGECRHFASAYASA 1663

Query: 221  RLALPAPESKNKT-TAKTVLV 280
            RLALPAP    ++ T+ T+ V
Sbjct: 1664 RLALPAPAPDERSLTSATIPV 1684


>ref|XP_002316517.1| DNA glycosylase [Populus trichocarpa] gi|222865557|gb|EEF02688.1| DNA
            glycosylase [Populus trichocarpa]
          Length = 519

 Score =  199 bits (507), Expect(2) = 9e-66
 Identities = 122/302 (40%), Positives = 169/302 (55%), Gaps = 16/302 (5%)
 Frame = +1

Query: 319  PVIEMPGSPEHHIEESEPIDIEDLYKDPALPDLNVTPDCPKCDDDLPIIRIN----STTL 486
            P+IE P +P+    E    DIED  +DP               D++P I++N    +  L
Sbjct: 239  PIIEEPATPDQENTELTETDIEDFGEDP---------------DEIPTIKLNMEEFTENL 283

Query: 487  DNQNGVEMSIQKGNMSQALGVPAVPSATPIPNFRG--RLQSVHQVFLLPDSHPILE-ELQ 657
             N     + +Q+G+MS+AL      ++ P P  +   RL++ HQV+ LPDSHP+LE  LQ
Sbjct: 284  QNYMHTNLELQEGDMSKALVALNPNASIPTPKLKNVSRLRTEHQVYELPDSHPLLEGNLQ 343

Query: 658  MDKRDPDDPSPYLFKPWAVLEEGSVSDRVPLGKTSDSF-----YCSSPQ---VCSEIVCS 813
            MD+R+PDDPSPYL   W              G+T++S       C S +   +C E  C 
Sbjct: 344  MDRREPDDPSPYLLAIWTP------------GETANSIEPPDQQCQSREPNKLCDEKTC- 390

Query: 814  TSSFTKNDVHSSTA-TVSGTLMIPVRSANNGRFPLNGTYFQINEVFADEESTQVPIIVPK 990
               F+ N +  + + TV GTL+IP R+A  G FPLNGTYFQ+NE+FAD ES+  PI VP+
Sbjct: 391  ---FSCNSIREANSQTVRGTLLIPCRTAMRGSFPLNGTYFQVNEMFADHESSLNPIDVPR 447

Query: 991  HWLYNLPRSLLYCGSSVSATFKGLSLDQISHAFNDEYYCNRGFDRKTRHTTNLSARFHIK 1170
              ++NLPR ++Y G+SVS+ FKGLS + I   F   + C RGFD+KTR    L AR H  
Sbjct: 448  SLIWNLPRRIVYFGTSVSSIFKGLSTEGIQFCFWRGFVCVRGFDQKTRAPRPLKARLHFP 507

Query: 1171 TS 1176
             S
Sbjct: 508  AS 509



 Score = 79.0 bits (193), Expect(2) = 9e-66
 Identities = 36/75 (48%), Positives = 45/75 (60%)
 Frame = +2

Query: 41  DNIQKYLYPRXXXXXXXXXXXXXXXXXXFGKVYCTKINPRCNACPLSGQCKHYASLSASQ 220
           ++IQKYL+PR                  FGKV+CTK  P CNACP+  +C+H+AS  AS 
Sbjct: 126 ESIQKYLWPRLCKLDQRTLYELHYQMITFGKVFCTKSRPNCNACPMRAECRHFASAFASA 185

Query: 221 RLALPAPESKNKTTA 265
           RLALP PE K  TT+
Sbjct: 186 RLALPGPEEKGITTS 200


>ref|XP_002267310.1| PREDICTED: transcriptional activator DEMETER-like [Vitis vinifera]
          Length = 2198

 Score =  197 bits (500), Expect(2) = 3e-65
 Identities = 126/305 (41%), Positives = 181/305 (59%), Gaps = 12/305 (3%)
 Frame = +1

Query: 316  EPVIEMPGSPEHHIEESEPIDIED-LYKDPALPDLNVTPDCPKCDDDLPIIRIN--STTL 486
            EP+IE+P +PE    E+   DIED  Y+DP               D++P I++N    TL
Sbjct: 1918 EPIIEVPATPEPQCIETLESDIEDAFYEDP---------------DEIPTIKLNFEEFTL 1962

Query: 487  DNQNGVE--MSIQKGNMSQALGVPAVPSATPIPNFR----GRLQSVHQVFLLPDSHPILE 648
            + QN ++  M +Q+G+MS+AL V   P AT IP  +     RL++ HQV+ LPDSHP+L+
Sbjct: 1963 NLQNYMQENMELQEGDMSKAL-VALDPKATSIPTPKLKNVSRLRTEHQVYELPDSHPLLK 2021

Query: 649  ELQMDKRDPDDPSPYLFKPWAVLEEGSVSDRVPLGKTSDSFYCSSPQVCSEIVCSTSSFT 828
               MD R+PDDPSPYL   W   E  + S   P  +  +S      ++C+E  C + +  
Sbjct: 2022 G--MDIREPDDPSPYLLAIWTPGETANSSQ--PPERRCESQ--EPGKLCNEKTCFSCNSL 2075

Query: 829  KNDVHSSTATVSGTLMIPVRSANNGRFPLNGTYFQINEVFADEESTQVPIIVPKHWLYNL 1008
            +    +++ TV GTL+IP R+A  G FPLNGTYFQ+NEVFAD +S+  PI VP+ W++NL
Sbjct: 2076 RE---ANSQTVRGTLLIPCRTAMRGSFPLNGTYFQVNEVFADHDSSINPIDVPRAWIWNL 2132

Query: 1009 PRSLLYCGSSVSATFKGLSLDQISHAFNDEYYCNRGFDRKTRHTTNLSARFHI---KTSM 1179
            PR  +Y G+SV++ F+GL  + I + F   + C RGFD+K+R    L AR H+   K S 
Sbjct: 2133 PRRTVYFGTSVTSIFRGLPTEGIQYCFWRGFVCVRGFDQKSRAPRPLMARLHLSANKLSK 2192

Query: 1180 QGNKN 1194
              N+N
Sbjct: 2193 TKNEN 2197



 Score = 80.1 bits (196), Expect(2) = 3e-65
 Identities = 39/80 (48%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
 Frame = +2

Query: 41   DNIQKYLYPRXXXXXXXXXXXXXXXXXXFGKVYCTKINPRCNACPLSGQCKHYASLSASQ 220
            ++IQKYL+PR                  FGKV+CTK  P CNACP+ G+C+H+AS  AS 
Sbjct: 1806 ESIQKYLWPRLCKLDQRTLYELHYQLITFGKVFCTKHKPNCNACPMRGECRHFASAFASA 1865

Query: 221  RLALPAPESKN--KTTAKTV 274
            RLALPAPE K+   +TA +V
Sbjct: 1866 RLALPAPEEKSIVSSTAPSV 1885


>emb|CBI40219.3| unnamed protein product [Vitis vinifera]
          Length = 1621

 Score =  197 bits (500), Expect(2) = 3e-65
 Identities = 126/305 (41%), Positives = 181/305 (59%), Gaps = 12/305 (3%)
 Frame = +1

Query: 316  EPVIEMPGSPEHHIEESEPIDIED-LYKDPALPDLNVTPDCPKCDDDLPIIRIN--STTL 486
            EP+IE+P +PE    E+   DIED  Y+DP               D++P I++N    TL
Sbjct: 1341 EPIIEVPATPEPQCIETLESDIEDAFYEDP---------------DEIPTIKLNFEEFTL 1385

Query: 487  DNQNGVE--MSIQKGNMSQALGVPAVPSATPIPNFR----GRLQSVHQVFLLPDSHPILE 648
            + QN ++  M +Q+G+MS+AL V   P AT IP  +     RL++ HQV+ LPDSHP+L+
Sbjct: 1386 NLQNYMQENMELQEGDMSKAL-VALDPKATSIPTPKLKNVSRLRTEHQVYELPDSHPLLK 1444

Query: 649  ELQMDKRDPDDPSPYLFKPWAVLEEGSVSDRVPLGKTSDSFYCSSPQVCSEIVCSTSSFT 828
               MD R+PDDPSPYL   W   E  + S   P  +  +S      ++C+E  C + +  
Sbjct: 1445 G--MDIREPDDPSPYLLAIWTPGETANSSQ--PPERRCESQ--EPGKLCNEKTCFSCNSL 1498

Query: 829  KNDVHSSTATVSGTLMIPVRSANNGRFPLNGTYFQINEVFADEESTQVPIIVPKHWLYNL 1008
            +    +++ TV GTL+IP R+A  G FPLNGTYFQ+NEVFAD +S+  PI VP+ W++NL
Sbjct: 1499 RE---ANSQTVRGTLLIPCRTAMRGSFPLNGTYFQVNEVFADHDSSINPIDVPRAWIWNL 1555

Query: 1009 PRSLLYCGSSVSATFKGLSLDQISHAFNDEYYCNRGFDRKTRHTTNLSARFHI---KTSM 1179
            PR  +Y G+SV++ F+GL  + I + F   + C RGFD+K+R    L AR H+   K S 
Sbjct: 1556 PRRTVYFGTSVTSIFRGLPTEGIQYCFWRGFVCVRGFDQKSRAPRPLMARLHLSANKLSK 1615

Query: 1180 QGNKN 1194
              N+N
Sbjct: 1616 TKNEN 1620



 Score = 80.1 bits (196), Expect(2) = 3e-65
 Identities = 39/80 (48%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
 Frame = +2

Query: 41   DNIQKYLYPRXXXXXXXXXXXXXXXXXXFGKVYCTKINPRCNACPLSGQCKHYASLSASQ 220
            ++IQKYL+PR                  FGKV+CTK  P CNACP+ G+C+H+AS  AS 
Sbjct: 1229 ESIQKYLWPRLCKLDQRTLYELHYQLITFGKVFCTKHKPNCNACPMRGECRHFASAFASA 1288

Query: 221  RLALPAPESKN--KTTAKTV 274
            RLALPAPE K+   +TA +V
Sbjct: 1289 RLALPAPEEKSIVSSTAPSV 1308


>ref|NP_001078527.1| transcriptional activator DEMETER [Arabidopsis thaliana]
            gi|108935833|sp|Q8LK56.2|DME_ARATH RecName:
            Full=Transcriptional activator DEMETER; AltName: Full=DNA
            glycosylase-related protein DME
            gi|84782664|gb|ABC61677.1| DNA glycosylase DEMETER
            [Arabidopsis thaliana] gi|332003378|gb|AED90761.1|
            transcriptional activator DEMETER [Arabidopsis thaliana]
          Length = 1987

 Score =  195 bits (496), Expect(2) = 6e-65
 Identities = 124/303 (40%), Positives = 173/303 (57%), Gaps = 11/303 (3%)
 Frame = +1

Query: 316  EPVIEMPGSPEHHIEESEPIDIEDLY--KDPALPDLNVTPDCPKCDDDLPIIRIN----S 477
            EP+IE P SP     E    DIED Y  +DP               D++P I++N     
Sbjct: 1709 EPIIEEPASPGQECTEITESDIEDAYYNEDP---------------DEIPTIKLNIEQFG 1753

Query: 478  TTLDNQNGVEMSIQKGNMSQALGVPAVPSATPIPNFR----GRLQSVHQVFLLPDSHPIL 645
             TL       M +Q+G+MS+AL V   P+ T IP  +     RL++ HQV+ LPDSH +L
Sbjct: 1754 MTLREHMERNMELQEGDMSKAL-VALHPTTTSIPTPKLKNISRLRTEHQVYELPDSHRLL 1812

Query: 646  EELQMDKRDPDDPSPYLFKPWAVLEEGSVSDRVPLGKTSDSFYCSSPQVCSEIVCSTSSF 825
            +   MDKR+PDDPSPYL   W   E  + S + P  K       +S ++C +  CS  + 
Sbjct: 1813 DG--MDKREPDDPSPYLLAIWTPGETAN-SAQPPEQKCGGK---ASGKMCFDETCSECNS 1866

Query: 826  TKNDVHSSTATVSGTLMIPVRSANNGRFPLNGTYFQINEVFADEESTQVPIIVPKHWLYN 1005
             +    +++ TV GTL+IP R+A  G FPLNGTYFQ+NE+FAD ES+  PI VP+ W+++
Sbjct: 1867 LRE---ANSQTVRGTLLIPCRTAMRGSFPLNGTYFQVNELFADHESSLKPIDVPRDWIWD 1923

Query: 1006 LPRSLLYCGSSVSATFKGLSLDQISHAFNDEYYCNRGFDRKTRHTTNLSARFHIKTS-MQ 1182
            LPR  +Y G+SV++ F+GLS +QI   F   + C RGF++KTR    L AR H   S ++
Sbjct: 1924 LPRRTVYFGTSVTSIFRGLSTEQIQFCFWKGFVCVRGFEQKTRAPRPLMARLHFPASKLK 1983

Query: 1183 GNK 1191
             NK
Sbjct: 1984 NNK 1986



 Score = 80.5 bits (197), Expect(2) = 6e-65
 Identities = 36/75 (48%), Positives = 48/75 (64%)
 Frame = +2

Query: 41   DNIQKYLYPRXXXXXXXXXXXXXXXXXXFGKVYCTKINPRCNACPLSGQCKHYASLSASQ 220
            ++IQK+L+PR                  FGKV+CTK  P CNACP+ G+C+H+AS  AS 
Sbjct: 1596 ESIQKFLWPRLCKLDQRTLYELHYQLITFGKVFCTKSRPNCNACPMRGECRHFASAYASA 1655

Query: 221  RLALPAPESKNKTTA 265
            RLALPAPE ++ T+A
Sbjct: 1656 RLALPAPEERSLTSA 1670