BLASTX nr result

ID: Bupleurum21_contig00012626 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012626
         (1285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529148.1| Transmembrane protein TPARL, putative [Ricin...   254   2e-80
ref|XP_002314881.1| predicted membrane protein [Populus trichoca...   251   1e-79
ref|XP_002281939.1| PREDICTED: GDT1-like protein 4 [Vitis vinife...   249   9e-79
ref|XP_002329381.1| predicted membrane protein [Populus trichoca...   248   3e-78
ref|XP_002312384.1| predicted membrane protein [Populus trichoca...   245   6e-78

>ref|XP_002529148.1| Transmembrane protein TPARL, putative [Ricinus communis]
            gi|223531427|gb|EEF33261.1| Transmembrane protein TPARL,
            putative [Ricinus communis]
          Length = 228

 Score =  254 bits (648), Expect(2) = 2e-80
 Identities = 131/190 (68%), Positives = 149/190 (78%), Gaps = 2/190 (1%)
 Frame = -1

Query: 1126 SVIQGFTKSLAMTVLSEIGDKTFFAAAILAMRYPRRLVLLGCLSALVVMTILSALLGWAA 947
            S++QGFTKSLAMTVLSEIGDKTFFAAAILAMR+PRRLVL GCL+AL+VMTILSA++GWAA
Sbjct: 3    SLVQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLAALIVMTILSAVVGWAA 62

Query: 946  PNLIPRKFTHHIXXXXXXXXXLWSLWDAF-XXXXXXXXXXXXXXXXXXVKSN-GSVKENS 773
            PNL+ R +THHI         +WSLWD F                    K+N G+ K+ +
Sbjct: 63   PNLLSRTWTHHITTLLFFGFGIWSLWDGFTDKGEAEELAEVEAKLDADWKANKGTTKDGA 122

Query: 772  KGGDDLKKQNRPFLTQLFSPILLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGII 593
            K  D+LKKQ RPFL+Q FSPILLKAFSITFFGEWGDKSQ+ATIGLAADENPFGVVLGGI+
Sbjct: 123  KADDELKKQRRPFLSQFFSPILLKAFSITFFGEWGDKSQIATIGLAADENPFGVVLGGIV 182

Query: 592  GHALCTTAAV 563
            G ALCTTAAV
Sbjct: 183  GQALCTTAAV 192



 Score = 73.2 bits (178), Expect(2) = 2e-80
 Identities = 36/41 (87%), Positives = 40/41 (97%)
 Frame = -3

Query: 449 TTAAVMGGKSLAKQISEKLIALSGGVLFIVFGIQSFLSTVE 327
           TTAAV+GGKSLA QISEK++ALSGGVLFI+FGIQSFLSTVE
Sbjct: 188 TTAAVVGGKSLASQISEKIVALSGGVLFIIFGIQSFLSTVE 228


>ref|XP_002314881.1| predicted membrane protein [Populus trichocarpa]
            gi|222863921|gb|EEF01052.1| predicted membrane protein
            [Populus trichocarpa]
          Length = 228

 Score =  251 bits (642), Expect(2) = 1e-79
 Identities = 133/190 (70%), Positives = 146/190 (76%), Gaps = 2/190 (1%)
 Frame = -1

Query: 1126 SVIQGFTKSLAMTVLSEIGDKTFFAAAILAMRYPRRLVLLGCLSALVVMTILSALLGWAA 947
            SV QGFTKSLAMTVLSEIGDKTFFAAAILAMR+PRRLVL GCL+AL+VMTILSA++GWAA
Sbjct: 3    SVAQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLAALIVMTILSAIVGWAA 62

Query: 946  PNLIPRKFTHHIXXXXXXXXXLWSLWDAF-XXXXXXXXXXXXXXXXXXVKSN-GSVKENS 773
            PNLI R +THHI          WSLWD F                    K+N G+ K  S
Sbjct: 63   PNLISRTWTHHITTILFFGFGFWSLWDGFNDKGEAEELAEVEAKLDADWKANTGTTKGGS 122

Query: 772  KGGDDLKKQNRPFLTQLFSPILLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGII 593
            K  D+LKK+ RPFL+QLFSPILLKAFSITFFGEWGDKSQ+ATIGLAADENP GVVLGGI+
Sbjct: 123  KDDDELKKRRRPFLSQLFSPILLKAFSITFFGEWGDKSQIATIGLAADENPLGVVLGGIV 182

Query: 592  GHALCTTAAV 563
            G ALCTTAAV
Sbjct: 183  GQALCTTAAV 192



 Score = 72.8 bits (177), Expect(2) = 1e-79
 Identities = 36/41 (87%), Positives = 39/41 (95%)
 Frame = -3

Query: 449 TTAAVMGGKSLAKQISEKLIALSGGVLFIVFGIQSFLSTVE 327
           TTAAV GGKSLA QISEK++ALSGGVLFI+FGIQSFLSTVE
Sbjct: 188 TTAAVFGGKSLASQISEKIVALSGGVLFIIFGIQSFLSTVE 228


>ref|XP_002281939.1| PREDICTED: GDT1-like protein 4 [Vitis vinifera]
            gi|297737851|emb|CBI27052.3| unnamed protein product
            [Vitis vinifera]
          Length = 230

 Score =  249 bits (636), Expect(2) = 9e-79
 Identities = 134/193 (69%), Positives = 145/193 (75%), Gaps = 2/193 (1%)
 Frame = -1

Query: 1135 MSHSVIQGFTKSLAMTVLSEIGDKTFFAAAILAMRYPRRLVLLGCLSALVVMTILSALLG 956
            MS SV+QGFTKSLAMTVLSEIGDKTFFAAAILAMR+PRRLVL GCL+AL+VMTI S ++G
Sbjct: 1    MSLSVVQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLAALIVMTIFSVVVG 60

Query: 955  WAAPNLIPRKFTHHIXXXXXXXXXLWSLWDAF-XXXXXXXXXXXXXXXXXXVKSN-GSVK 782
            WAAPNL+ RK+THHI         LWSLWD F                    K+N  S K
Sbjct: 61   WAAPNLLSRKWTHHITTLLFFGFGLWSLWDGFKEDGEAEELAEVEAKLNADWKTNTSSAK 120

Query: 781  ENSKGGDDLKKQNRPFLTQLFSPILLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLG 602
             +SK  D+LKKQ RP L Q FSPI LKAFSITFFGEWGDKSQLATIGLAADENP GVVLG
Sbjct: 121  GDSKDDDELKKQRRPILMQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPIGVVLG 180

Query: 601  GIIGHALCTTAAV 563
            GIIG ALCTTAAV
Sbjct: 181  GIIGQALCTTAAV 193



 Score = 72.4 bits (176), Expect(2) = 9e-79
 Identities = 37/42 (88%), Positives = 39/42 (92%)
 Frame = -3

Query: 449 TTAAVMGGKSLAKQISEKLIALSGGVLFIVFGIQSFLSTVES 324
           TTAAV+GGKSLA QISEK +ALSGGVLFIVFGIQS LSTVES
Sbjct: 189 TTAAVLGGKSLASQISEKFVALSGGVLFIVFGIQSLLSTVES 230


>ref|XP_002329381.1| predicted membrane protein [Populus trichocarpa]
            gi|222870431|gb|EEF07562.1| predicted membrane protein
            [Populus trichocarpa]
          Length = 228

 Score =  248 bits (633), Expect(2) = 3e-78
 Identities = 132/190 (69%), Positives = 145/190 (76%), Gaps = 2/190 (1%)
 Frame = -1

Query: 1126 SVIQGFTKSLAMTVLSEIGDKTFFAAAILAMRYPRRLVLLGCLSALVVMTILSALLGWAA 947
            SV QGFTKSLAMTV+SEIGDKTFFAAAILAMR+PRRLVL GCL+AL+VMTILSA +GWAA
Sbjct: 3    SVAQGFTKSLAMTVVSEIGDKTFFAAAILAMRHPRRLVLSGCLAALIVMTILSAAVGWAA 62

Query: 946  PNLIPRKFTHHIXXXXXXXXXLWSLWDAF-XXXXXXXXXXXXXXXXXXVKSN-GSVKENS 773
            PNLI R +THHI         LWSLWD F                    K+N G+ K  S
Sbjct: 63   PNLISRAWTHHITTILFFGFGLWSLWDGFNDKGEAEELAEVEAKLDADWKANTGTAKVGS 122

Query: 772  KGGDDLKKQNRPFLTQLFSPILLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGII 593
            K  D+LKKQ R FL+Q FSPILLKAFSITFFGEWGDKSQ+ATIGLAADENPFGVV+GGI+
Sbjct: 123  KDSDELKKQRRTFLSQFFSPILLKAFSITFFGEWGDKSQIATIGLAADENPFGVVIGGIV 182

Query: 592  GHALCTTAAV 563
            G ALCTTAAV
Sbjct: 183  GQALCTTAAV 192



 Score = 72.0 bits (175), Expect(2) = 3e-78
 Identities = 37/41 (90%), Positives = 39/41 (95%)
 Frame = -3

Query: 449 TTAAVMGGKSLAKQISEKLIALSGGVLFIVFGIQSFLSTVE 327
           TTAAV+GGKSLA QISEK+ ALSGGVLFIVFGIQSFLSTVE
Sbjct: 188 TTAAVIGGKSLASQISEKIAALSGGVLFIVFGIQSFLSTVE 228


>ref|XP_002312384.1| predicted membrane protein [Populus trichocarpa]
            gi|222852204|gb|EEE89751.1| predicted membrane protein
            [Populus trichocarpa]
          Length = 224

 Score =  245 bits (626), Expect(2) = 6e-78
 Identities = 130/188 (69%), Positives = 143/188 (76%), Gaps = 2/188 (1%)
 Frame = -1

Query: 1120 IQGFTKSLAMTVLSEIGDKTFFAAAILAMRYPRRLVLLGCLSALVVMTILSALLGWAAPN 941
            I+GFTKSLAMTVLSEIGDKTFFAAAILAMR+PRRLVL GCL+AL+VMTILSA +GWAAPN
Sbjct: 1    IKGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLAALIVMTILSAAVGWAAPN 60

Query: 940  LIPRKFTHHIXXXXXXXXXLWSLWDAF-XXXXXXXXXXXXXXXXXXVKSN-GSVKENSKG 767
            LI R +THHI         LWSLWD F                    K+N G+ K  SK 
Sbjct: 61   LISRAWTHHITTILFFGFGLWSLWDGFNDKGEAEELAEVEAKLDADWKANTGTAKAGSKD 120

Query: 766  GDDLKKQNRPFLTQLFSPILLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGIIGH 587
             D+ KKQ R FL+Q FSPILLKAFSITFFGEWGDKSQ+ATIGLAADENPFGVV+GGI+G 
Sbjct: 121  SDEFKKQRRTFLSQFFSPILLKAFSITFFGEWGDKSQIATIGLAADENPFGVVIGGIVGQ 180

Query: 586  ALCTTAAV 563
            ALCTTAAV
Sbjct: 181  ALCTTAAV 188



 Score = 73.6 bits (179), Expect(2) = 6e-78
 Identities = 37/41 (90%), Positives = 40/41 (97%)
 Frame = -3

Query: 449 TTAAVMGGKSLAKQISEKLIALSGGVLFIVFGIQSFLSTVE 327
           TTAAV+GGKSLA QISEK++ALSGGVLFIVFGIQSFLSTVE
Sbjct: 184 TTAAVIGGKSLASQISEKIVALSGGVLFIVFGIQSFLSTVE 224


Top