BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012624
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...   113   2e-23
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...   103   1e-20
ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine...    95   5e-18
ref|XP_003610528.1| F-box family protein [Medicago truncatula] g...    93   3e-17
ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine...    91   1e-16

>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score =  113 bits (282), Expect = 2e-23
 Identities = 63/161 (39%), Positives = 95/161 (59%), Gaps = 4/161 (2%)
 Frame = -1

Query: 472 DSLEHSTPVEIDEPLKTSLYGCSIVSSCNGLHCLFNPMADIFLWNPATRKYRKLPAAPAD 293
           D L++  P  +D PL    +G  I+ SCNGL C+ N + DI LWNP+ R +R +P  P +
Sbjct: 70  DLLDNIQP--LDHPLMCYNHGVKILGSCNGLLCICNIVDDIALWNPSIRAHRVVPYLPVE 127

Query: 292 FHCSFGF--GRSSLCGFGYDAANDDYKVMRIQRDDLLSAGS--SKVIVFGLKTNSWRRLK 125
               FG    R S+ GFGYD +NDDYK++RI +   +   S  S+V VF L+ NSWRR+ 
Sbjct: 128 LKRYFGMCSCRVSVFGFGYDLSNDDYKLVRIAQFGGVDRKSFESEVKVFSLRKNSWRRIA 187

Query: 124 NISYDFQFFGVWGMFMGGAFHWITTKNLGPKTCPSILAVDL 2
           ++ Y   + G  G++  GA HW+ +++       +I+A+DL
Sbjct: 188 DMPYCVLYPGENGIYANGALHWLVSQDPDSTVADTIVALDL 228


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score =  103 bits (257), Expect = 1e-20
 Identities = 55/152 (36%), Positives = 86/152 (56%), Gaps = 4/152 (2%)
 Frame = -1

Query: 445 EIDEPLKTSLYGCSIVSSCNGLHCLFNPMADIFLWNPATRKYRKLPAAPADFHCSFGFGR 266
           E++ PL    +G  ++ S NGL C+ N + DI +WNP+TRK+R +P  P +    FG   
Sbjct: 84  ELNHPLMCYNHGIKVLGSVNGLLCISNVVDDIAVWNPSTRKHRVVPFLPIELKRYFGTKS 143

Query: 265 SS--LCGFGYDAANDDYKVMRIQR--DDLLSAGSSKVIVFGLKTNSWRRLKNISYDFQFF 98
            S  + GFGYD+  DDYK++RI +       +  S+V V+ L+  SWRR+ ++ Y   + 
Sbjct: 144 CSVYVFGFGYDSVRDDYKLVRIAQFGGGGKRSFESEVKVYSLRKQSWRRIGDMPYCVHYP 203

Query: 97  GVWGMFMGGAFHWITTKNLGPKTCPSILAVDL 2
           G  G+F  GA HW+  +N        ++A+DL
Sbjct: 204 GANGVFANGALHWVVGENPESNVANIVVALDL 235


>ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 394

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 53/154 (34%), Positives = 81/154 (52%), Gaps = 4/154 (2%)
 Frame = -1

Query: 451 PVEIDEPLKTSLYGCSIVSSCNGLHCLFNPMADIFLWNPATRKYRKLP--AAPADFHCSF 278
           PV ++ PL       +++ SCNGL C+ N   DI  WNP+ R++R LP    P   H   
Sbjct: 77  PVSLNHPLMCYSNSITLLGSCNGLLCISNVADDIAFWNPSLRQHRILPYLPVPRRRHPDT 136

Query: 277 GFGRSSLCGFGYDAANDDYKVMRIQRDDLLSAGS--SKVIVFGLKTNSWRRLKNISYDFQ 104
               + +CGFG+D    DYK++RI     L   S  S+V ++ L+ N+W+ L ++ Y   
Sbjct: 137 TLFAARVCGFGFDHKTRDYKLVRISYFVDLHDRSFDSQVKLYTLRANAWKTLPSLPYALC 196

Query: 103 FFGVWGMFMGGAFHWITTKNLGPKTCPSILAVDL 2
                G+F+G + HW+ T+ L P     I+A DL
Sbjct: 197 CARTMGVFVGNSLHWVVTRKLEPDQPDLIIAFDL 230


>ref|XP_003610528.1| F-box family protein [Medicago truncatula]
           gi|355511583|gb|AES92725.1| F-box family protein
           [Medicago truncatula]
          Length = 392

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 52/156 (33%), Positives = 83/156 (53%), Gaps = 8/156 (5%)
 Frame = -1

Query: 445 EIDEPLKTSLYGCSIVSSCNGLHCLFNPMADIFLWNPATRKYRKLPAAPA------DFHC 284
           E+D PL        ++ SCNGL C+ N   DI  WNP  RK+R +P+ P       + + 
Sbjct: 74  ELDHPLMCYSNRIKVLGSCNGLLCICNIADDIAFWNPTIRKHRIIPSEPLIRKETNENNT 133

Query: 283 SFGFGRSSLCGFGYDAANDDYKVMRIQR--DDLLSAGSSKVIVFGLKTNSWRRLKNISYD 110
                 + + GFGYD+A DDYK++ I    D    +  S V ++ ++T+ W+ L ++ Y 
Sbjct: 134 ITTLLAAHVYGFGYDSATDDYKLVSISYFVDLHNRSFDSHVKIYTMRTDVWKTLPSMPYA 193

Query: 109 FQFFGVWGMFMGGAFHWITTKNLGPKTCPSILAVDL 2
                  G+F+ GA HW+ T++L P++   I+A DL
Sbjct: 194 LCCARTMGVFVSGALHWVVTRDLEPESRDLIVAFDL 229


>ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 392

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 51/155 (32%), Positives = 82/155 (52%), Gaps = 5/155 (3%)
 Frame = -1

Query: 451 PVEIDEPLKTSLYGCSIVSSCNGLHCLFNPMADIFLWNPATRKYRKLPAAPAD---FHCS 281
           P+ ++ PL       +++ SCNGL C+ N   DI  WNP+ R++R LP+ P      H  
Sbjct: 77  PLFLNHPLMCYSNNITLLGSCNGLLCISNVADDIAFWNPSLRQHRILPSLPLPRRRLHPD 136

Query: 280 FGFGRSSLCGFGYDAANDDYKVMRIQRDDLLSAGS--SKVIVFGLKTNSWRRLKNISYDF 107
                + + GFG+D  + DYK++RI     L   S  S+V ++ L+ N+W+ L ++ Y  
Sbjct: 137 TTLFAARVYGFGFDHTSPDYKLVRISYFVDLQDRSFDSQVKLYTLRANAWKTLPSMPYAL 196

Query: 106 QFFGVWGMFMGGAFHWITTKNLGPKTCPSILAVDL 2
                 G+F+G + HW+ T+ L P     I+A DL
Sbjct: 197 CCARTMGVFVGNSLHWVVTRKLEPDQPDLIVAFDL 231