BLASTX nr result

ID: Bupleurum21_contig00012574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012574
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002894114.1| hypothetical protein ARALYDRAFT_473985 [Arab...   172   3e-41
gb|AAK30572.1|AF346660_1 unknown [Brassica napus]                     171   7e-41
ref|NP_175278.1| uncharacterized protein [Arabidopsis thaliana] ...   171   7e-41
ref|NP_566588.1| uncharacterized protein [Arabidopsis thaliana] ...   170   1e-40
ref|XP_002885230.1| predicted protein [Arabidopsis lyrata subsp....   170   1e-40

>ref|XP_002894114.1| hypothetical protein ARALYDRAFT_473985 [Arabidopsis lyrata subsp.
           lyrata] gi|297339956|gb|EFH70373.1| hypothetical protein
           ARALYDRAFT_473985 [Arabidopsis lyrata subsp. lyrata]
          Length = 426

 Score =  172 bits (435), Expect = 3e-41
 Identities = 82/104 (78%), Positives = 93/104 (89%)
 Frame = -3

Query: 322 GIAGAMKQSRLRTYVMSFDAETLQSYATIRSKEAISIVEKHTEALFGRPEIFISPEGRVD 143
           G +  MKQSRL+TYVMSFD ETLQ YATIRS+EA+ I+EKHTEALFGRPEI I+P+G +D
Sbjct: 323 GFSSDMKQSRLKTYVMSFDGETLQRYATIRSREAVGIIEKHTEALFGRPEIVITPQGTID 382

Query: 142 SSKDENIKISLGGLRRLILEAVTFGSFLWDVESHVDSRYHFVAN 11
           SSKDE+IKIS  GL+RL+LEAVTFGSFLWDVESHVDSRYHFV N
Sbjct: 383 SSKDEHIKISFKGLKRLVLEAVTFGSFLWDVESHVDSRYHFVLN 426


>gb|AAK30572.1|AF346660_1 unknown [Brassica napus]
          Length = 256

 Score =  171 bits (432), Expect = 7e-41
 Identities = 81/104 (77%), Positives = 92/104 (88%)
 Frame = -3

Query: 322 GIAGAMKQSRLRTYVMSFDAETLQSYATIRSKEAISIVEKHTEALFGRPEIFISPEGRVD 143
           G    +K SRLRTYVMSFD+ETLQ YATIRS+EA+ I+EKHTEALFG+PEI I+PEG VD
Sbjct: 153 GFGSEIKPSRLRTYVMSFDSETLQRYATIRSREAVGIIEKHTEALFGKPEIVITPEGTVD 212

Query: 142 SSKDENIKISLGGLRRLILEAVTFGSFLWDVESHVDSRYHFVAN 11
           SSKDE IKIS GG++RL+LEAVTFGSFLWDVESHVD+RYHFV N
Sbjct: 213 SSKDEQIKISFGGMKRLVLEAVTFGSFLWDVESHVDARYHFVLN 256


>ref|NP_175278.1| uncharacterized protein [Arabidopsis thaliana]
           gi|8778707|gb|AAF79715.1|AC020889_23 T1N15.6
           [Arabidopsis thaliana] gi|18086465|gb|AAL57686.1|
           At1g48450/T1N15_5 [Arabidopsis thaliana]
           gi|24030356|gb|AAN41342.1| unknown protein [Arabidopsis
           thaliana] gi|332194172|gb|AEE32293.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 423

 Score =  171 bits (432), Expect = 7e-41
 Identities = 81/104 (77%), Positives = 93/104 (89%)
 Frame = -3

Query: 322 GIAGAMKQSRLRTYVMSFDAETLQSYATIRSKEAISIVEKHTEALFGRPEIFISPEGRVD 143
           G +  MKQSRL+TYVMSFD ETLQ YATIRS+E++ I+EKHTEALFGRPEI I+P+G +D
Sbjct: 320 GFSSDMKQSRLKTYVMSFDGETLQRYATIRSRESVGIIEKHTEALFGRPEIVITPQGTID 379

Query: 142 SSKDENIKISLGGLRRLILEAVTFGSFLWDVESHVDSRYHFVAN 11
           SSKDE+IKIS  GL+RL+LEAVTFGSFLWDVESHVDSRYHFV N
Sbjct: 380 SSKDEHIKISFKGLKRLVLEAVTFGSFLWDVESHVDSRYHFVLN 423


>ref|NP_566588.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9294484|dbj|BAB02703.1| unnamed protein product
           [Arabidopsis thaliana] gi|20466177|gb|AAM20406.1|
           unknown protein [Arabidopsis thaliana]
           gi|332642487|gb|AEE76008.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 421

 Score =  170 bits (431), Expect = 1e-40
 Identities = 81/104 (77%), Positives = 92/104 (88%)
 Frame = -3

Query: 322 GIAGAMKQSRLRTYVMSFDAETLQSYATIRSKEAISIVEKHTEALFGRPEIFISPEGRVD 143
           G    +K SRLR+YVMSFDAETLQ YATIRS+EA+ I+EKHTEALFG+PEI I+PEG VD
Sbjct: 318 GFGSEIKPSRLRSYVMSFDAETLQRYATIRSREAVGIIEKHTEALFGKPEIVITPEGTVD 377

Query: 142 SSKDENIKISLGGLRRLILEAVTFGSFLWDVESHVDSRYHFVAN 11
           SSKDE IKIS GG++RL+LEAVTFGSFLWDVESHVD+RYHFV N
Sbjct: 378 SSKDEQIKISFGGMKRLVLEAVTFGSFLWDVESHVDARYHFVLN 421


>ref|XP_002885230.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297331070|gb|EFH61489.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 426

 Score =  170 bits (431), Expect = 1e-40
 Identities = 81/104 (77%), Positives = 92/104 (88%)
 Frame = -3

Query: 322 GIAGAMKQSRLRTYVMSFDAETLQSYATIRSKEAISIVEKHTEALFGRPEIFISPEGRVD 143
           G    +K SRLR+YVMSFDAETLQ YATIRS+EA+ I+EKHTEALFG+PEI I+PEG VD
Sbjct: 323 GFGSEIKPSRLRSYVMSFDAETLQRYATIRSREAVGIIEKHTEALFGKPEIVITPEGTVD 382

Query: 142 SSKDENIKISLGGLRRLILEAVTFGSFLWDVESHVDSRYHFVAN 11
           SSKDE IKIS GG++RL+LEAVTFGSFLWDVESHVD+RYHFV N
Sbjct: 383 SSKDEQIKISFGGMKRLVLEAVTFGSFLWDVESHVDARYHFVLN 426


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