BLASTX nr result
ID: Bupleurum21_contig00012547
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00012547
(1691 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268036.2| PREDICTED: splicing factor 3A subunit 3-like... 740 0.0
ref|XP_003523375.1| PREDICTED: splicing factor 3A subunit 3-like... 739 0.0
ref|XP_003526707.1| PREDICTED: splicing factor 3A subunit 3-like... 731 0.0
ref|XP_003602225.1| Splicing factor 3a [Medicago truncatula] gi|... 726 0.0
ref|XP_002317774.1| predicted protein [Populus trichocarpa] gi|2... 717 0.0
>ref|XP_002268036.2| PREDICTED: splicing factor 3A subunit 3-like [Vitis vinifera]
gi|302144037|emb|CBI23142.3| unnamed protein product
[Vitis vinifera]
Length = 509
Score = 740 bits (1911), Expect = 0.0
Identities = 348/445 (78%), Positives = 400/445 (89%)
Frame = -1
Query: 1691 KDSARKDEIAALGGQMASGNSVFSAFYDRLKEIREYHRRNPTARIVDSTDEYEQMLKEEP 1512
KD+ARKDEIAALGGQ A+G +VFSAFYDRLKEIREYHR++ AR+VD+ +EYE++LKEE
Sbjct: 65 KDNARKDEIAALGGQTATGTNVFSAFYDRLKEIREYHRKHQAARVVDANEEYEELLKEEL 124
Query: 1511 HVEFSGEEGFGRYLDLHELYNDYINSKFGEPIEYSAYLEVFSHAHKIPRKLKLTRQYKEY 1332
+EF GEE FGRYLDLHELYN+YINSKFGE IEYSAY+EVFS KIPRKLKLTRQY+EY
Sbjct: 125 RIEFRGEEAFGRYLDLHELYNEYINSKFGEHIEYSAYVEVFSEPQKIPRKLKLTRQYREY 184
Query: 1331 LTKLLDYLIYFFERTEPLQDLEKIFSKVTTELDEQWASGMVQGWENDTKENGHDQSEHAT 1152
L LL+YLIYFFERTEPLQDL++IF+K+ T+ +EQWA+GMV+GWEN+++ENG+ ++HA
Sbjct: 185 LENLLEYLIYFFERTEPLQDLDRIFTKLATDFEEQWANGMVEGWENESQENGNVPTQHAA 244
Query: 1151 IDLDYYSTVEELTEVGPERLKEALAALGLKTGGTIRQRAERLFLTKNIPLEKLDRKHFAK 972
IDLDYYSTVEE+ EVGPE LKEALAALGLKTGGT++QRAERLFLTK+ PLE+LD+KHFAK
Sbjct: 245 IDLDYYSTVEEVMEVGPEMLKEALAALGLKTGGTVQQRAERLFLTKHTPLEQLDQKHFAK 304
Query: 971 GSRAAEQNGDVATVQQTNDWKDIALMEAKMEKLCDLLQETIVRTRENVEKKQALTYXXXX 792
GSR +EQNG A ++ + K+IAL+EAK+ K+C+LL ETIVRT+EN+EKKQALTY
Sbjct: 305 GSRRSEQNGTPAAPKEADSSKEIALLEAKLRKICELLYETIVRTKENIEKKQALTYEEME 364
Query: 791 XXXXXXEVQADTESDDDEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNHSY 612
EVQADTESDD+EQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNHSY
Sbjct: 365 AEREEEEVQADTESDDEEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNHSY 424
Query: 611 WGRRAYERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWDKIQARQGVNKWRPDLE 432
WGRRA+ERHFKEWRHQHGMRCLGIPNTKNFNEITSI+EAK LW++IQ RQG+NKWRPDLE
Sbjct: 425 WGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIKEAKVLWERIQERQGLNKWRPDLE 484
Query: 431 EEYEDKEGNIYNKKTYTDLQRQGLI 357
EEYEDKEGNIYNKKTYTDLQRQGLI
Sbjct: 485 EEYEDKEGNIYNKKTYTDLQRQGLI 509
>ref|XP_003523375.1| PREDICTED: splicing factor 3A subunit 3-like [Glycine max]
Length = 509
Score = 739 bits (1909), Expect = 0.0
Identities = 351/444 (79%), Positives = 391/444 (88%)
Frame = -1
Query: 1688 DSARKDEIAALGGQMASGNSVFSAFYDRLKEIREYHRRNPTARIVDSTDEYEQMLKEEPH 1509
D+ARKDEIAALGGQ A+G +VFSAFYDRLKEIREYHR++P AR+VD+ D+YE +L EE
Sbjct: 66 DNARKDEIAALGGQTATGINVFSAFYDRLKEIREYHRKHPVARVVDANDDYETLLNEELQ 125
Query: 1508 VEFSGEEGFGRYLDLHELYNDYINSKFGEPIEYSAYLEVFSHAHKIPRKLKLTRQYKEYL 1329
+EFSGEE GRYLDLHELY Y+NSKFGEPIEYSAYL+VFS KIPRK+K+TRQY+EYL
Sbjct: 126 IEFSGEEALGRYLDLHELYYQYVNSKFGEPIEYSAYLDVFSDTDKIPRKMKMTRQYREYL 185
Query: 1328 TKLLDYLIYFFERTEPLQDLEKIFSKVTTELDEQWASGMVQGWENDTKENGHDQSEHATI 1149
LL+YL+YFF+RTEPLQDL++I SKVTTE +E WA G VQGWEND +ENGH +EHATI
Sbjct: 186 ANLLEYLLYFFQRTEPLQDLDRILSKVTTEFEESWAVGKVQGWENDNQENGHVLAEHATI 245
Query: 1148 DLDYYSTVEELTEVGPERLKEALAALGLKTGGTIRQRAERLFLTKNIPLEKLDRKHFAKG 969
DLDYYSTVEEL EVGPERLKEALAALGLKTGGT++QRAERLFLTK+ PLEKLD+KHFAKG
Sbjct: 246 DLDYYSTVEELMEVGPERLKEALAALGLKTGGTVQQRAERLFLTKHTPLEKLDKKHFAKG 305
Query: 968 SRAAEQNGDVATVQQTNDWKDIALMEAKMEKLCDLLQETIVRTRENVEKKQALTYXXXXX 789
+R E+NG A Q+ + K+IALMEAKM KLCDLL+ETI RT++NV KKQALTY
Sbjct: 306 ARGVEKNGVAAVSQEDGNSKEIALMEAKMTKLCDLLEETIARTKDNVVKKQALTYEEMEA 365
Query: 788 XXXXXEVQADTESDDDEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNHSYW 609
E Q DTES+D+E+QIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGN+SYW
Sbjct: 366 EREEEETQEDTESEDEEEQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYW 425
Query: 608 GRRAYERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWDKIQARQGVNKWRPDLEE 429
GRRA+ERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELW KIQ RQGVNKWRPDLEE
Sbjct: 426 GRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQQRQGVNKWRPDLEE 485
Query: 428 EYEDKEGNIYNKKTYTDLQRQGLI 357
EYEDKEGNIYNKKTYTDLQRQGLI
Sbjct: 486 EYEDKEGNIYNKKTYTDLQRQGLI 509
>ref|XP_003526707.1| PREDICTED: splicing factor 3A subunit 3-like [Glycine max]
Length = 509
Score = 731 bits (1887), Expect = 0.0
Identities = 347/444 (78%), Positives = 387/444 (87%)
Frame = -1
Query: 1688 DSARKDEIAALGGQMASGNSVFSAFYDRLKEIREYHRRNPTARIVDSTDEYEQMLKEEPH 1509
D+ARKDEIAALGGQ A+G +VFSAFYDRLKEIREYHR++P AR+VD+ D+YE +L EEP
Sbjct: 66 DNARKDEIAALGGQTATGINVFSAFYDRLKEIREYHRKHPVARVVDANDDYETLLNEEPQ 125
Query: 1508 VEFSGEEGFGRYLDLHELYNDYINSKFGEPIEYSAYLEVFSHAHKIPRKLKLTRQYKEYL 1329
+EFSGEE GRYLDLHELY Y+NSKFGEPIEYSAYL+VFS KIPRK+K+TRQY+EYL
Sbjct: 126 IEFSGEESLGRYLDLHELYYQYVNSKFGEPIEYSAYLDVFSDTDKIPRKMKMTRQYREYL 185
Query: 1328 TKLLDYLIYFFERTEPLQDLEKIFSKVTTELDEQWASGMVQGWENDTKENGHDQSEHATI 1149
LL+YL+YFF+RTEPLQDL++I SKVTTE +E W G VQ WEND +ENGH +EHA I
Sbjct: 186 ANLLEYLLYFFQRTEPLQDLDRILSKVTTEFEESWVVGKVQRWENDNQENGHVLAEHAPI 245
Query: 1148 DLDYYSTVEELTEVGPERLKEALAALGLKTGGTIRQRAERLFLTKNIPLEKLDRKHFAKG 969
DLDYYST+EEL EVGPERLKEALAALGLKTGGT++QRAERLFLTK+ PLEKLDRKHFAKG
Sbjct: 246 DLDYYSTIEELMEVGPERLKEALAALGLKTGGTVQQRAERLFLTKHTPLEKLDRKHFAKG 305
Query: 968 SRAAEQNGDVATVQQTNDWKDIALMEAKMEKLCDLLQETIVRTRENVEKKQALTYXXXXX 789
+ E+NG A Q+ + K+IALMEAKM KLC LL+ETI RT++NV KKQALTY
Sbjct: 306 ACGVEKNGVAAVPQEDGNSKEIALMEAKMTKLCHLLEETIARTKDNVVKKQALTYEEMEA 365
Query: 788 XXXXXEVQADTESDDDEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNHSYW 609
E Q D+ES+D+EQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGN+SYW
Sbjct: 366 EREEEETQEDSESEDEEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYW 425
Query: 608 GRRAYERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWDKIQARQGVNKWRPDLEE 429
GRRA+ERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELW KIQ RQGVNKWRPDLEE
Sbjct: 426 GRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQQRQGVNKWRPDLEE 485
Query: 428 EYEDKEGNIYNKKTYTDLQRQGLI 357
EYEDKEGNIYNKKTYTDLQRQGLI
Sbjct: 486 EYEDKEGNIYNKKTYTDLQRQGLI 509
>ref|XP_003602225.1| Splicing factor 3a [Medicago truncatula] gi|355491273|gb|AES72476.1|
Splicing factor 3a [Medicago truncatula]
Length = 508
Score = 726 bits (1874), Expect = 0.0
Identities = 346/445 (77%), Positives = 387/445 (86%)
Frame = -1
Query: 1691 KDSARKDEIAALGGQMASGNSVFSAFYDRLKEIREYHRRNPTARIVDSTDEYEQMLKEEP 1512
KD+ARKDEIAALGGQ A+G ++FSAFYDRLKEIREYHR++P AR+VD+ D++E +LKEEP
Sbjct: 65 KDNARKDEIAALGGQTATGINLFSAFYDRLKEIREYHRKHPAARVVDANDDFEDLLKEEP 124
Query: 1511 HVEFSGEEGFGRYLDLHELYNDYINSKFGEPIEYSAYLEVFSHAHKIPRKLKLTRQYKEY 1332
+EFSGEE FGRYLD++ELY Y+NSKFGEPIEYSAYL++FS KIPRK+K TRQY+EY
Sbjct: 125 KIEFSGEEAFGRYLDINELYQQYVNSKFGEPIEYSAYLDIFSETDKIPRKMKTTRQYREY 184
Query: 1331 LTKLLDYLIYFFERTEPLQDLEKIFSKVTTELDEQWASGMVQGWENDTKENGHDQSEHAT 1152
L LL YL FF RTEPLQDL++IFSKVTTE +E WA+G V GWEN +ENGH ++H
Sbjct: 185 LKNLLQYLTSFFHRTEPLQDLDRIFSKVTTEFNENWATGRVLGWENVNQENGHVPAQHTA 244
Query: 1151 IDLDYYSTVEELTEVGPERLKEALAALGLKTGGTIRQRAERLFLTKNIPLEKLDRKHFAK 972
IDLDYYSTVEEL EVGPERLKEALAALGLKTGGTI+QRAERLFLTK+ PLE LD+KHFAK
Sbjct: 245 IDLDYYSTVEELMEVGPERLKEALAALGLKTGGTIQQRAERLFLTKHTPLEMLDKKHFAK 304
Query: 971 GSRAAEQNGDVATVQQTNDWKDIALMEAKMEKLCDLLQETIVRTRENVEKKQALTYXXXX 792
G+R +E+NG VA Q + K+IALMEAKM KLCDLL ETI RT++N+ KKQALTY
Sbjct: 305 GARGSEKNG-VAAAPQDGNLKEIALMEAKMNKLCDLLDETITRTKDNIVKKQALTYEEIE 363
Query: 791 XXXXXXEVQADTESDDDEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNHSY 612
E Q D+ES+DDEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGN+SY
Sbjct: 364 AEREEEETQEDSESEDDEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSY 423
Query: 611 WGRRAYERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWDKIQARQGVNKWRPDLE 432
WGRRA+ERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELW KIQ RQGVNKWRPDLE
Sbjct: 424 WGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQQRQGVNKWRPDLE 483
Query: 431 EEYEDKEGNIYNKKTYTDLQRQGLI 357
EEYEDKEGNIYNKKTYTDLQRQGLI
Sbjct: 484 EEYEDKEGNIYNKKTYTDLQRQGLI 508
>ref|XP_002317774.1| predicted protein [Populus trichocarpa] gi|222858447|gb|EEE95994.1|
predicted protein [Populus trichocarpa]
Length = 509
Score = 717 bits (1852), Expect = 0.0
Identities = 336/445 (75%), Positives = 388/445 (87%)
Frame = -1
Query: 1691 KDSARKDEIAALGGQMASGNSVFSAFYDRLKEIREYHRRNPTARIVDSTDEYEQMLKEEP 1512
KD+AR+DEIAALGGQ A G +VFSAFYDRLKEIREYHRR+P AR+VD+ ++YE MLKEEP
Sbjct: 65 KDNARRDEIAALGGQTAMGTNVFSAFYDRLKEIREYHRRHPAARVVDANEDYEAMLKEEP 124
Query: 1511 HVEFSGEEGFGRYLDLHELYNDYINSKFGEPIEYSAYLEVFSHAHKIPRKLKLTRQYKEY 1332
+EF+GEE FG+YLD+HELYN Y N KF +PIEYS YL++FS + +P KLK +R+Y+EY
Sbjct: 125 VIEFTGEEAFGKYLDMHELYNQYNNLKFEKPIEYSTYLDIFSQPNIVPHKLKFSRRYREY 184
Query: 1331 LTKLLDYLIYFFERTEPLQDLEKIFSKVTTELDEQWASGMVQGWENDTKENGHDQSEHAT 1152
+ LL+YL+YFF+RTEPLQDL++IFSKVTTE +EQW + VQGWE ++ENGH ++H
Sbjct: 185 MENLLEYLVYFFQRTEPLQDLDRIFSKVTTEFEEQWENDAVQGWEKTSQENGHLSADHTV 244
Query: 1151 IDLDYYSTVEELTEVGPERLKEALAALGLKTGGTIRQRAERLFLTKNIPLEKLDRKHFAK 972
IDLD+YSTVEEL EVGPE+LKEALAALGLK+GGT++QRAERLFLTK+ PLEKLD+KHF K
Sbjct: 245 IDLDFYSTVEELKEVGPEKLKEALAALGLKSGGTVQQRAERLFLTKDTPLEKLDKKHFVK 304
Query: 971 GSRAAEQNGDVATVQQTNDWKDIALMEAKMEKLCDLLQETIVRTRENVEKKQALTYXXXX 792
GSR +E NG AT ++ ++ K+IALMEAK+ KLCDLL ETIVRT+ENV KKQALTY
Sbjct: 305 GSRGSEPNGGAATSKEVDNSKEIALMEAKINKLCDLLDETIVRTKENVVKKQALTYDEME 364
Query: 791 XXXXXXEVQADTESDDDEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNHSY 612
E QADTESDDDEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGN+SY
Sbjct: 365 AEREEEETQADTESDDDEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSY 424
Query: 611 WGRRAYERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWDKIQARQGVNKWRPDLE 432
WGRRA+ERHFKEWRHQHGMRCLGIPNTKNFNEITSI+EA+ELW IQ RQGVNKWRPDLE
Sbjct: 425 WGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIKEAQELWKGIQERQGVNKWRPDLE 484
Query: 431 EEYEDKEGNIYNKKTYTDLQRQGLI 357
EEYEDKEGNIYN+KTYTDLQRQGLI
Sbjct: 485 EEYEDKEGNIYNRKTYTDLQRQGLI 509