BLASTX nr result

ID: Bupleurum21_contig00012541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012541
         (1156 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70168.1| hypothetical protein VITISV_006870 [Vitis vinifera]   287   3e-75
ref|XP_002314139.1| predicted protein [Populus trichocarpa] gi|2...   270   5e-70
ref|XP_004143210.1| PREDICTED: uncharacterized protein LOC101204...   257   4e-66
ref|XP_002520458.1| hypothetical protein RCOM_0731430 [Ricinus c...   252   1e-64
ref|XP_002299841.1| predicted protein [Populus trichocarpa] gi|2...   232   1e-58

>emb|CAN70168.1| hypothetical protein VITISV_006870 [Vitis vinifera]
          Length = 922

 Score =  287 bits (735), Expect = 3e-75
 Identities = 175/408 (42%), Positives = 239/408 (58%), Gaps = 29/408 (7%)
 Frame = -2

Query: 1155 PGHRLSFVLNRIRRSYNSKDSSDIPQFSSEEVTAKSGSEMANSFVCPNDATCDQSNAASR 976
            P  R S  ++RI RS +SKD   IP  S   V  KSG + A +     D+  D  NA SR
Sbjct: 438  PTRRFSISMSRIIRSSSSKDGMAIPPLSXSHVDTKSGPDRAMAACM--DSYSDGQNATSR 495

Query: 975  ECSSALKRLLNPLMKAKVANL-KFADQPQRNLTSTHRASASFDEQGQGAPSFECPLKLKL 799
              SS L+RLL+PL+K K  N  +F +  Q++ TS  R+  S  EQ   + S     K+KL
Sbjct: 496  ARSSPLRRLLDPLLKPKAGNSHQFPEPLQKDSTSIDRSCLSSKEQLDSSNSRSG--KVKL 553

Query: 798  DMTNMRNPNLDETDRNSIKGSSTVKAYVQVSAKDDLPLFTFAVDNNSNVLAATLRNFSSK 619
            D+++ R  N++++ RN   GS   +A +QV+ K+ LPLFTFAVD + ++LAAT+R  +  
Sbjct: 554  DLSSCRTINVNDSYRNKKHGSLPXQALLQVAVKNGLPLFTFAVDGDKDILAATMRKSTIG 613

Query: 618  KDDPTWIYTFFSIQNTRKSG-GWLTQGSRSKD--YVPSAVAQMKVSDLPFPNLGGHNTVD 448
            KDD +WIYTFF+I   +K    W+ QG + K   Y+P+ VAQMKVSD  F +L   N+  
Sbjct: 614  KDDYSWIYTFFTISEVKKKNRSWINQGQKGKGHGYIPNVVAQMKVSDSQFSSLTICNSTK 673

Query: 447  LLSTREFVLYAVDLKLFDYQICDMQPNDEIAAIVVKFPRK-----IITHFQGSLQSVKPA 283
              S REFVL+AVDL+  D Q  ++QPNDE+AA+VVK P++     I    Q S  +   A
Sbjct: 674  QFSLREFVLFAVDLRQADEQTSNIQPNDELAAMVVKIPKENTGSSIKDEQQSSYFNDLSA 733

Query: 282  SISRGIQ-------------EDKSFVESQELFSTTVLLPGGIHGLPSKGEPSPLIDRWLS 142
            S+S G               +++ F  SQ+ F T V+LP G+H LP+KGEPS L++RW S
Sbjct: 734  SVSNGNSPXVKCQPVWEENVQNQPFAGSQDHFITKVILPSGVHSLPNKGEPSRLLERWKS 793

Query: 141  GGQCDCGGWDMGCKVKVLGNNNQR-------PNSKFELFPQSQEEAQQ 19
            GG CDCGGWDMGCK++VL N NQ           +FELF     EA +
Sbjct: 794  GGSCDCGGWDMGCKLRVLVNQNQHRKKPSPPTTDRFELFSLEGVEADE 841


>ref|XP_002314139.1| predicted protein [Populus trichocarpa] gi|222850547|gb|EEE88094.1|
            predicted protein [Populus trichocarpa]
          Length = 928

 Score =  270 bits (690), Expect = 5e-70
 Identities = 163/403 (40%), Positives = 234/403 (58%), Gaps = 25/403 (6%)
 Frame = -2

Query: 1155 PGHRLSFVLNRIRRSYNSKDSSDIPQFSSEEVTAKSGSEMANSFVCPNDATCDQSNAASR 976
            P  RLS  +++I ++++SK+ S  PQ SS   +A+SGSE+A +  C  + + D  NA SR
Sbjct: 436  PFRRLSSGMSKISKNFSSKEGSSKPQLSSTSNSAQSGSEIAMASTCQENQSSDTQNATSR 495

Query: 975  ECSSALKRLLNPLMKAKVANLK-FADQPQRNLTSTHRASASFDEQGQGAPSFECPLKLKL 799
              SS L+RLL+P++K K AN     +Q QR   ST +   S +      P      K+K 
Sbjct: 496  ARSSPLRRLLDPMLKPKAANFHPSVEQLQRGSISTDKICKSSNVHLDCMPGTAQIGKVKS 555

Query: 798  DMTNMRNPNLDETDRNSIKGSSTVKAYVQVSAKDDLPLFTFAVDNNSNVLAATLRNFS-S 622
            D T     ++ ++ ++    SS  +A ++V+ K+  P FTFAVDN  ++LAAT++  S S
Sbjct: 556  DTTTPCRISVSDSSKDKKHISSAFQALLRVAVKNGQPTFTFAVDNERDILAATMKKLSTS 615

Query: 621  KKDDPTWIYTFFSIQNTRKSGG-WLTQGSRSK--DYVPSAVAQMKVSDLPFPNLGGHNTV 451
            ++DD + IY F++I   +K    W+ QG + K  DY+P+ VAQ+KVS   F NL   N +
Sbjct: 616  REDDYSCIYNFYAIHEVKKKNARWINQGGKGKCHDYIPNVVAQLKVSGSQFSNLTRQNYM 675

Query: 450  DLLSTREFVLYAVDLKLFDYQICDMQPNDEIAAIVVKFPRKII---------THFQGSLQ 298
                 REFVL+A+DL+  + Q  D QPNDE+AAIVVK P  I          T+   +  
Sbjct: 676  AQSFAREFVLFAMDLQQAEQQTLDFQPNDELAAIVVKIPEVISRSTVRDGNRTNNCNNFS 735

Query: 297  SVKPASISRGIQEDKSFVESQELFSTTVLLPGGIHGLPSKGEPSPLIDRWLSGGQCDCGG 118
             V+  S S  +Q ++  + SQ L +TTV+LP GIH LP+KG PS L+ RW SGG CDCGG
Sbjct: 736  EVRCNSTSGNVQ-NQPILSSQNLINTTVILPSGIHSLPNKGGPSSLLQRWRSGGSCDCGG 794

Query: 117  WDMGCKVKVLGNNNQ-----RPN------SKFELFPQSQEEAQ 22
            WD+GCK+++L N NQ      P+       KFEL  Q +EE Q
Sbjct: 795  WDLGCKLRILVNQNQINKKSSPSKACLAIDKFELVSQCEEENQ 837


>ref|XP_004143210.1| PREDICTED: uncharacterized protein LOC101204783 [Cucumis sativus]
            gi|449522207|ref|XP_004168119.1| PREDICTED:
            uncharacterized protein LOC101226098 [Cucumis sativus]
          Length = 904

 Score =  257 bits (656), Expect = 4e-66
 Identities = 164/401 (40%), Positives = 222/401 (55%), Gaps = 29/401 (7%)
 Frame = -2

Query: 1155 PGHRLSFVLNRIRRSYNSKDSSDIPQFSSEEVTAKSGSEMANSFVCPNDATCDQSNAASR 976
            P  RLS  + R R+S NS  +S      S  ++ +SGSE A    C ++   D+    SR
Sbjct: 415  PFSRLSISMGRRRKSSNSVGNSCASVQGSAHISVQSGSENAMPSACLSELRNDKPINTSR 474

Query: 975  ECSSALKRLLNPLMKAKVANLKFADQPQRNLTSTHRASASFDEQGQGAPSFECPLKLKLD 796
              SS L+RLL+PL+K K A    A +P       H        +   + + +  + LKLD
Sbjct: 475  ASSSPLRRLLDPLLKPKAAVYHHAVEPTEK--DLHDVPDKIYNRQSNSSTLQSRM-LKLD 531

Query: 795  MTNMRNPNLDETDRNSIKGSSTVKAYVQVSAKDDLPLFTFAVDNNSNVLAATLRNFSSKK 616
            M   R  ++++T  +  +GSS V A +QV+ K+ LPLFTFAVDN SN+LAAT++  SS+K
Sbjct: 532  MGRCRKISVNDTALDKKQGSSVVHALLQVAFKNGLPLFTFAVDNVSNILAATVKLTSSRK 591

Query: 615  DDPTWIYTFFSIQNT-RKSGGWLTQGSRSK--DYVPSAVAQMKVSDLPFPNLGGHNTVDL 445
               + +YTFF +Q   RK+G W+ QGS+ K  DYV + +AQM VSD     +        
Sbjct: 592  GTVSHVYTFFIVQEVKRKTGSWINQGSKGKGRDYVSNVIAQMNVSDSEISRVTRPYNP-- 649

Query: 444  LSTREFVLYAVDLKLFDYQICDMQPNDEIAAIVVKFPRKIITHFQ--------------- 310
             STREFVL++VDLK  D+Q  D  PN+E+AAI+VK P KI                    
Sbjct: 650  -STREFVLFSVDLKQGDHQTSDFLPNEELAAIIVKIPPKIKQGTATDEVKINTNKNLTKG 708

Query: 309  GSLQSVKPASISRGIQEDKSFVESQELFSTTVLLPGGIHGLPSKGEPSPLIDRWLSGGQC 130
            GS +    + +S  +Q       S+   STTVLLP GIH LPSKG PS LI+RW SGG C
Sbjct: 709  GSRECFPHSKVSEPVQHPAG---SESFISTTVLLPSGIHSLPSKGGPSSLIERWTSGGSC 765

Query: 129  DCGGWDMGCKVKVLGNNNQ--------RP---NSKFELFPQ 40
            DCGGWD+GCK++V  N NQ        +P     +F+LFPQ
Sbjct: 766  DCGGWDLGCKLRVFANQNQIIEKSSSSQPVPLTDQFKLFPQ 806


>ref|XP_002520458.1| hypothetical protein RCOM_0731430 [Ricinus communis]
            gi|223540300|gb|EEF41871.1| hypothetical protein
            RCOM_0731430 [Ricinus communis]
          Length = 912

 Score =  252 bits (643), Expect = 1e-64
 Identities = 159/399 (39%), Positives = 224/399 (56%), Gaps = 23/399 (5%)
 Frame = -2

Query: 1155 PGHRLSFVLNRIRRSYNSKDSSDIPQFSSEEVTAKSGSE--MANSFVCPNDATCDQSNAA 982
            P  RL+  + R+ +S+NSKD S +P+ S+    AKS +E  M  SF      + D  NA 
Sbjct: 431  PFRRLTIGIGRMSKSFNSKDDSSLPRLSTARSFAKSTTENAMPPSF---QSTSSDMQNAT 487

Query: 981  SRECSSALKRLLNPLMKAKVANL-KFADQPQRNLTSTHRASASFDEQGQGAPSFECPLKL 805
            SR  SS L+RLL+PL+K K  N  +  +  Q++     R   S   Q   +     P  +
Sbjct: 488  SRARSSPLRRLLDPLLKPKAPNCHQSGELLQQDSVLKERVCKSSRGQVDSSIGARQPGIV 547

Query: 804  KLDMTNMRNPNLDETDRNSIKGSSTVKAYVQVSAKDDLPLFTFAVDNNSNVLAATLRNFS 625
            KLD+ + R  N+D++ +    G+S  +A++QV+ K+  P+FTFAV N  NVLAAT++  S
Sbjct: 548  KLDIASCREINIDDSTQGKKSGTSAFQAFLQVATKNGQPVFTFAVGNERNVLAATMKKLS 607

Query: 624  S-KKDDPTWIYTFFSIQNTRKSGG-WLTQGSR--SKDYVPSAVAQMKVSDLPFPNLGGHN 457
            S ++DD + IYTF + ++ RK  G W+ QG +  S DY+P+ VAQ+KVS   F       
Sbjct: 608  SSREDDYSCIYTFIAFKDVRKKNGRWINQGGKYNSHDYIPNVVAQLKVSGSQFSQS---- 663

Query: 456  TVDLLSTREFVLYAVDLKLFDYQICDMQPNDEIAAIVVKFPRKI--ITHFQGSLQSVK-- 289
                  TREFVL++VDL+  + Q   ++ NDE+AAIVVK P+ I   T   G   S    
Sbjct: 664  -----FTREFVLFSVDLRQAEQQTLGLEANDELAAIVVKIPKVINKCTSRDGHRSSKCTD 718

Query: 288  -PASISRGIQEDKSFVESQELFSTTVLLPGGIHGLPSKGEPSPLIDRWLSGGQCDCGGWD 112
             P         +   +  Q L STTV+LP G+H LP+KG PS LI RW SGG CDCGGWD
Sbjct: 719  FPDVRYDSTSGEHCMINVQSLISTTVILPSGVHSLPNKGGPSSLIQRWRSGGSCDCGGWD 778

Query: 111  MGCKVKVLGNNNQ--------RP---NSKFELFPQSQEE 28
            +GCK+K+  N++Q        +P   + KFEL  Q  EE
Sbjct: 779  LGCKLKIFANDSQHIKKSCSSKPCAISDKFELISQGSEE 817


>ref|XP_002299841.1| predicted protein [Populus trichocarpa] gi|222847099|gb|EEE84646.1|
            predicted protein [Populus trichocarpa]
          Length = 799

 Score =  232 bits (592), Expect = 1e-58
 Identities = 144/360 (40%), Positives = 208/360 (57%), Gaps = 14/360 (3%)
 Frame = -2

Query: 1155 PGHRLSFVLNRIRRSYNSKDSSDIPQFSSEEVTAKSGSEMANSFVCPNDATCDQSNAASR 976
            P  RLS  +++I +S++SK+ S  PQFSS   +A+SGSE A + +   + + D  NA+SR
Sbjct: 440  PFRRLSIGMSKISKSFSSKEGSSKPQFSSTYNSAQSGSESAMASMRQGNQSSDAQNASSR 499

Query: 975  ECSSALKRLLNPLMKAKVANLKFADQP-QRNLTSTHRASASFDEQGQGAPSFECPLKLKL 799
              SS L+RLL P++K + AN   + +  QR   ST     S + Q    P       +K 
Sbjct: 500  ARSSPLRRLLEPMLKPRAANFHHSGEKLQRGSKSTDTVCKSLNIQLDCMPGTAQIEVVKS 559

Query: 798  DMTNMRNPNLDETDRNSIKGSSTVKAYVQVSAKDDLPLFTFAVDNNSNVLAATLRNFS-S 622
            D T     ++ ++ ++    SS  +A ++V+ K+  P+FTFAVDN  ++LAAT++  S S
Sbjct: 560  DTTTPGKISVSDSFKDKKYTSSPFQALLRVAVKNGQPMFTFAVDNERDLLAATIKKLSAS 619

Query: 621  KKDDPTWIYTFFSIQNTRKSGG-WLTQGSRSK--DYVPSAVAQMKVSDLPFPNLGGHNTV 451
            ++DD + IYTFF+I   +K  G W  QG + K  DY+P+ VAQ+KVS   F NL   N +
Sbjct: 620  REDDYSCIYTFFAIHEVKKRNGRWTNQGGKGKGHDYIPNVVAQLKVSGSQFSNLTRQNYM 679

Query: 450  DLLSTREFVLYAVDLKLFDYQICDMQPNDEIAAIVVKFPRKII---------THFQGSLQ 298
                 REFVL+A++    + Q  D QPNDE+AAIVVK P  I          T+   +  
Sbjct: 680  AQSFAREFVLFAMEPHQAEQQTLDFQPNDELAAIVVKIPEVINRSTIRDGNQTNKCNNYS 739

Query: 297  SVKPASISRGIQEDKSFVESQELFSTTVLLPGGIHGLPSKGEPSPLIDRWLSGGQCDCGG 118
              +  S S  +Q ++  + SQ L +TTV+LP GIH LP+KG PS L+ RW SGG CDCGG
Sbjct: 740  EARCNSTSGNVQ-NQPVLGSQSLINTTVILPSGIHSLPNKGGPSSLLQRWRSGGSCDCGG 798


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