BLASTX nr result

ID: Bupleurum21_contig00012532 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012532
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275650.1| PREDICTED: glutamyl-tRNA(Gln) amidotransfera...   108   6e-22
ref|XP_004161755.1| PREDICTED: glutamyl-tRNA(Gln) amidotransfera...   107   1e-21
ref|XP_004136231.1| PREDICTED: glutamyl-tRNA(Gln) amidotransfera...   107   1e-21
ref|XP_002516491.1| Glutamyl-tRNA(Gln) amidotransferase subunit ...   104   8e-21
ref|XP_003591983.1| Coronatine-insensitive [Medicago truncatula]...    98   6e-19

>ref|XP_002275650.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial [Vitis vinifera]
           gi|353558764|sp|D7STK2.1|GATC_VITVI RecName:
           Full=Glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial; Short=Glu-AdT subunit C;
           Flags: Precursor gi|296081596|emb|CBI20601.3| unnamed
           protein product [Vitis vinifera]
          Length = 137

 Score =  108 bits (269), Expect = 6e-22
 Identities = 61/115 (53%), Positives = 77/115 (66%)
 Frame = -3

Query: 345 MLLLSRYTAVAMLRSSAPSFSPENHRHFRSLSYSVFTQQRRRGLSTVKSSLEPPDLTRLA 166
           +LLL   TA  +L +S  +FS                +   R  ST +S+L PPDL RLA
Sbjct: 6   LLLLKATTAETLLFTSKSTFS------------KALIRNSTRSFST-RSALLPPDLPRLA 52

Query: 165 QTARISLSPTEVEEFSPTIQKVVDWFGQLQNVNLESIEPAIRADTEGSNWRDDLP 1
           +TARISL+P EVEEF+P I++V+DWFGQLQ V+L+SIEP+IRADTEG N RDD P
Sbjct: 53  ETARISLTPHEVEEFAPKIRQVIDWFGQLQAVDLQSIEPSIRADTEGDNLRDDSP 107


>ref|XP_004161755.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 145

 Score =  107 bits (267), Expect = 1e-21
 Identities = 52/88 (59%), Positives = 68/88 (77%)
 Frame = -3

Query: 264 FRSLSYSVFTQQRRRGLSTVKSSLEPPDLTRLAQTARISLSPTEVEEFSPTIQKVVDWFG 85
           F SL  S  + +     S + +SL+PPD+ RLAQTARISL+PT+ EEF+P I +VVDWFG
Sbjct: 28  FHSLPVSNISIRNSSTASGISASLQPPDVPRLAQTARISLTPTQAEEFAPKITQVVDWFG 87

Query: 84  QLQNVNLESIEPAIRADTEGSNWRDDLP 1
           QLQ V+L+SIEP+IRADTEG + R+D+P
Sbjct: 88  QLQTVDLQSIEPSIRADTEGGSQRNDIP 115


>ref|XP_004136231.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 145

 Score =  107 bits (267), Expect = 1e-21
 Identities = 52/88 (59%), Positives = 68/88 (77%)
 Frame = -3

Query: 264 FRSLSYSVFTQQRRRGLSTVKSSLEPPDLTRLAQTARISLSPTEVEEFSPTIQKVVDWFG 85
           F SL  S  + +     S + +SL+PPD+ RLAQTARISL+PT+ EEF+P I +VVDWFG
Sbjct: 28  FHSLPVSNISIRNSSTASGISASLQPPDVPRLAQTARISLTPTQAEEFAPKITQVVDWFG 87

Query: 84  QLQNVNLESIEPAIRADTEGSNWRDDLP 1
           QLQ V+L+SIEP+IRADTEG + R+D+P
Sbjct: 88  QLQTVDLQSIEPSIRADTEGGSQRNDIP 115


>ref|XP_002516491.1| Glutamyl-tRNA(Gln) amidotransferase subunit C, putative [Ricinus
           communis] gi|353558760|sp|B9RRX2.1|GATC_RICCO RecName:
           Full=Glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial; Short=Glu-AdT subunit C;
           Flags: Precursor gi|223544311|gb|EEF45832.1|
           Glutamyl-tRNA(Gln) amidotransferase subunit C, putative
           [Ricinus communis]
          Length = 143

 Score =  104 bits (259), Expect = 8e-21
 Identities = 50/81 (61%), Positives = 67/81 (82%)
 Frame = -3

Query: 243 VFTQQRRRGLSTVKSSLEPPDLTRLAQTARISLSPTEVEEFSPTIQKVVDWFGQLQNVNL 64
           + T++R    +T  SSL+PPD++RLA+TARISL+  EVEEF+P I++V+DWFGQLQ V+L
Sbjct: 33  LLTKRRFSIKATNGSSLQPPDVSRLAETARISLNQNEVEEFAPKIRQVIDWFGQLQAVDL 92

Query: 63  ESIEPAIRADTEGSNWRDDLP 1
            S+EPAIRAD+EG N RDD+P
Sbjct: 93  NSVEPAIRADSEGENLRDDVP 113


>ref|XP_003591983.1| Coronatine-insensitive [Medicago truncatula]
           gi|355481031|gb|AES62234.1| Coronatine-insensitive
           [Medicago truncatula]
          Length = 134

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 56/106 (52%), Positives = 72/106 (67%)
 Frame = -3

Query: 318 VAMLRSSAPSFSPENHRHFRSLSYSVFTQQRRRGLSTVKSSLEPPDLTRLAQTARISLSP 139
           V +LR +  S S  N +    L      Q RR    T  SSLEPP+++ LA+TA ISL+P
Sbjct: 5   VLLLRGTPLSLSLSNSKIQHKL-----LQFRRLSSKTNCSSLEPPNVSHLAKTAHISLTP 59

Query: 138 TEVEEFSPTIQKVVDWFGQLQNVNLESIEPAIRADTEGSNWRDDLP 1
           TEVEEF P IQ+V+ WFGQLQ V+L+S+EP+IRADTE +N RD+ P
Sbjct: 60  TEVEEFGPKIQQVIGWFGQLQGVDLQSVEPSIRADTE-NNLRDNTP 104