BLASTX nr result
ID: Bupleurum21_contig00012531
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00012531 (1107 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003536057.1| PREDICTED: single-stranded DNA-binding prote... 281 2e-73 ref|XP_002319495.1| predicted protein [Populus trichocarpa] gi|2... 276 9e-72 ref|XP_002529271.1| Single-stranded DNA-binding protein, mitocho... 271 2e-70 ref|NP_001237927.1| uncharacterized protein LOC100306124 [Glycin... 270 4e-70 gb|AFK40642.1| unknown [Lotus japonicus] 268 2e-69 >ref|XP_003536057.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like [Glycine max] Length = 217 Score = 281 bits (719), Expect = 2e-73 Identities = 144/219 (65%), Positives = 164/219 (74%), Gaps = 12/219 (5%) Frame = +1 Query: 115 MTSFALRIAKHLSFSVSTRIHYPFVAGCGRGGTSLFSTISSGSDNE-----NDT------ 261 M S A+R+AKHL S T + G R G S +ST SG +N+ ND Sbjct: 1 MNSMAVRLAKHLRLSALTSFS---LGGVPRSGASWYSTSLSGGENDHPLPDNDAPKKEAL 57 Query: 262 -EKVDDFFPPKQELRLQGVDPQKGWEFRGVHKAIICGKIGNVPIQKILRNGRTVTIFTVG 438 E+ DDF K EL+LQGVDP+KGW FRGVHKAIICGK+G P+QKILRNGR +TIFTVG Sbjct: 58 DEEFDDFLGEKPELQLQGVDPKKGWGFRGVHKAIICGKVGQAPVQKILRNGRNITIFTVG 117 Query: 439 TGGMFDQRLLGSKDLPKPAQWHRIAVHNDELGAYAIQKFVKNASVYVEGDIETRVYNDSI 618 TGGMFDQR+ G KDLPKPAQWHRIAVHND LG YA+Q+ KN+SVYVEGDIETRVYNDSI Sbjct: 118 TGGMFDQRIQGPKDLPKPAQWHRIAVHNDILGTYAVQQLFKNSSVYVEGDIETRVYNDSI 177 Query: 619 NGTVKNIPEICVRRDGIIRLLKPGESMSNISLDELRDGL 735 NG VK+IPEICVRRDG IRL+K GES+ SLDELR+GL Sbjct: 178 NGNVKSIPEICVRRDGRIRLIKNGESIDKTSLDELREGL 216 >ref|XP_002319495.1| predicted protein [Populus trichocarpa] gi|222857871|gb|EEE95418.1| predicted protein [Populus trichocarpa] Length = 215 Score = 276 bits (705), Expect = 9e-72 Identities = 142/219 (64%), Positives = 167/219 (76%), Gaps = 12/219 (5%) Frame = +1 Query: 115 MTSFALRIAKHLSFSVSTRIHYPFV-------AGCGRGGTSLFSTISSGSDNE---NDT- 261 M+S LR AK L R+ P + G R S +ST+S SDNE ND Sbjct: 1 MSSLVLRFAKLL------RVPSPVIMPTSSLGVGLQRSLRSCYSTVSFNSDNEEGKNDKV 54 Query: 262 -EKVDDFFPPKQELRLQGVDPQKGWEFRGVHKAIICGKIGNVPIQKILRNGRTVTIFTVG 438 E+ DD ++E R QGVDP+KGWEFRGVH+AIICGK+G P+QKILRNGRTVTIFTVG Sbjct: 55 EEEFDDLLGDRRESRFQGVDPRKGWEFRGVHRAIICGKVGQAPVQKILRNGRTVTIFTVG 114 Query: 439 TGGMFDQRLLGSKDLPKPAQWHRIAVHNDELGAYAIQKFVKNASVYVEGDIETRVYNDSI 618 TGGMFDQR++GSKDLPKPAQWHRIAVHND LGAYA+Q+ KN+SVYVEGDIE RVYNDSI Sbjct: 115 TGGMFDQRIIGSKDLPKPAQWHRIAVHNDSLGAYAVQQLAKNSSVYVEGDIEIRVYNDSI 174 Query: 619 NGTVKNIPEICVRRDGIIRLLKPGESMSNISLDELRDGL 735 +G VKNIPEICVRRDG IRL++ GE++SNIS ++LR+GL Sbjct: 175 SGEVKNIPEICVRRDGKIRLIRSGENISNISFEDLREGL 213 >ref|XP_002529271.1| Single-stranded DNA-binding protein, mitochondrial precursor, putative [Ricinus communis] gi|223531260|gb|EEF33103.1| Single-stranded DNA-binding protein, mitochondrial precursor, putative [Ricinus communis] Length = 213 Score = 271 bits (693), Expect = 2e-70 Identities = 137/213 (64%), Positives = 166/213 (77%), Gaps = 6/213 (2%) Frame = +1 Query: 115 MTSFALRIAKHLSFSVSTRIHYPFVAGCGRGGTSLFSTISS------GSDNENDTEKVDD 276 M+S A++ AK L S V G R +L+ST S G +NE D E+ DD Sbjct: 1 MSSLAVKFAKFLRVSSPAATTSSPVVGLQRSFKTLYSTESFSGENDVGKNNELD-EEFDD 59 Query: 277 FFPPKQELRLQGVDPQKGWEFRGVHKAIICGKIGNVPIQKILRNGRTVTIFTVGTGGMFD 456 F K EL++QGVDP+KGW FRGVHKAIICGK+G P+QKILRNGRTVTIFTVGTGGMFD Sbjct: 60 FLGEKPELQIQGVDPRKGWGFRGVHKAIICGKVGQAPVQKILRNGRTVTIFTVGTGGMFD 119 Query: 457 QRLLGSKDLPKPAQWHRIAVHNDELGAYAIQKFVKNASVYVEGDIETRVYNDSINGTVKN 636 QR++G+KDLPKPAQWHRIAVHN+ LGAYA+Q+ KN+SVYVEG+IETRVYNDSI+G VKN Sbjct: 120 QRIVGAKDLPKPAQWHRIAVHNETLGAYAVQQLAKNSSVYVEGEIETRVYNDSISGEVKN 179 Query: 637 IPEICVRRDGIIRLLKPGESMSNISLDELRDGL 735 IPEIC+RRDG IRL+ G+++S+IS D+LR+GL Sbjct: 180 IPEICIRRDGKIRLVTSGKNVSDISFDDLREGL 212 >ref|NP_001237927.1| uncharacterized protein LOC100306124 [Glycine max] gi|255627623|gb|ACU14156.1| unknown [Glycine max] Length = 236 Score = 270 bits (691), Expect = 4e-70 Identities = 141/224 (62%), Positives = 162/224 (72%), Gaps = 11/224 (4%) Frame = +1 Query: 115 MTSFALRIAKHLSFSVSTRIHYPFVAGCGRGGTSLFSTISSGSD-----------NENDT 261 M S A+R+ KHL S T + G R G S +ST SG + NE Sbjct: 1 MNSMAVRLVKHLQLSAPTSSSF---GGVPRSGASWYSTSLSGGEYQPSQDNVAPKNEALD 57 Query: 262 EKVDDFFPPKQELRLQGVDPQKGWEFRGVHKAIICGKIGNVPIQKILRNGRTVTIFTVGT 441 ++DDF K EL+LQGVDP+KGW FRGVHKAIICGK+G P+QKILRNGR +TIFTVGT Sbjct: 58 GELDDFLGEKAELQLQGVDPKKGWGFRGVHKAIICGKVGQAPVQKILRNGRNLTIFTVGT 117 Query: 442 GGMFDQRLLGSKDLPKPAQWHRIAVHNDELGAYAIQKFVKNASVYVEGDIETRVYNDSIN 621 GGMFDQR+ G KDLPKPAQWHRIAVHND LGAYA+QK KN+SVYVEGDIE RVYNDSIN Sbjct: 118 GGMFDQRIQGPKDLPKPAQWHRIAVHNDILGAYAVQKLFKNSSVYVEGDIEIRVYNDSIN 177 Query: 622 GTVKNIPEICVRRDGIIRLLKPGESMSNISLDELRDGLL*LKFD 753 G VK+IPEICVRRDG I L+K GES+ SLDELR+ ++ K D Sbjct: 178 GEVKSIPEICVRRDGKICLIKSGESIDKTSLDELRERVVLGKSD 221 >gb|AFK40642.1| unknown [Lotus japonicus] Length = 220 Score = 268 bits (684), Expect = 2e-69 Identities = 136/219 (62%), Positives = 162/219 (73%), Gaps = 12/219 (5%) Frame = +1 Query: 115 MTSFALRIAKHLSFSVSTRIHYPFVAGCGRGGTSLFSTISS------------GSDNEND 258 M S A+R+AKHL + + + V S +ST S G +NE Sbjct: 1 MNSIAVRVAKHLRITSNVGVAGGGVWRRHGPAASWYSTFLSEGEGDQPSRGNGGLNNEEL 60 Query: 259 TEKVDDFFPPKQELRLQGVDPQKGWEFRGVHKAIICGKIGNVPIQKILRNGRTVTIFTVG 438 E++DDF K EL+LQGVDP++GW FRGVHKAIICGK+G P+QKILRNG+ VTIFTVG Sbjct: 61 DEEIDDFLGGKPELQLQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVG 120 Query: 439 TGGMFDQRLLGSKDLPKPAQWHRIAVHNDELGAYAIQKFVKNASVYVEGDIETRVYNDSI 618 TGGM DQR++G++D+PKP QWHRIAVHND LGAYA+Q+ KN+SVYVEGDIETRVYNDSI Sbjct: 121 TGGMSDQRIVGARDMPKPPQWHRIAVHNDVLGAYAVQQICKNSSVYVEGDIETRVYNDSI 180 Query: 619 NGTVKNIPEICVRRDGIIRLLKPGESMSNISLDELRDGL 735 NG VK+IPEICVRRDG IRL+K GES ISLDELR+GL Sbjct: 181 NGEVKSIPEICVRRDGKIRLIKSGESADKISLDELREGL 219