BLASTX nr result

ID: Bupleurum21_contig00012531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012531
         (1107 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536057.1| PREDICTED: single-stranded DNA-binding prote...   281   2e-73
ref|XP_002319495.1| predicted protein [Populus trichocarpa] gi|2...   276   9e-72
ref|XP_002529271.1| Single-stranded DNA-binding protein, mitocho...   271   2e-70
ref|NP_001237927.1| uncharacterized protein LOC100306124 [Glycin...   270   4e-70
gb|AFK40642.1| unknown [Lotus japonicus]                              268   2e-69

>ref|XP_003536057.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
           [Glycine max]
          Length = 217

 Score =  281 bits (719), Expect = 2e-73
 Identities = 144/219 (65%), Positives = 164/219 (74%), Gaps = 12/219 (5%)
 Frame = +1

Query: 115 MTSFALRIAKHLSFSVSTRIHYPFVAGCGRGGTSLFSTISSGSDNE-----NDT------ 261
           M S A+R+AKHL  S  T      + G  R G S +ST  SG +N+     ND       
Sbjct: 1   MNSMAVRLAKHLRLSALTSFS---LGGVPRSGASWYSTSLSGGENDHPLPDNDAPKKEAL 57

Query: 262 -EKVDDFFPPKQELRLQGVDPQKGWEFRGVHKAIICGKIGNVPIQKILRNGRTVTIFTVG 438
            E+ DDF   K EL+LQGVDP+KGW FRGVHKAIICGK+G  P+QKILRNGR +TIFTVG
Sbjct: 58  DEEFDDFLGEKPELQLQGVDPKKGWGFRGVHKAIICGKVGQAPVQKILRNGRNITIFTVG 117

Query: 439 TGGMFDQRLLGSKDLPKPAQWHRIAVHNDELGAYAIQKFVKNASVYVEGDIETRVYNDSI 618
           TGGMFDQR+ G KDLPKPAQWHRIAVHND LG YA+Q+  KN+SVYVEGDIETRVYNDSI
Sbjct: 118 TGGMFDQRIQGPKDLPKPAQWHRIAVHNDILGTYAVQQLFKNSSVYVEGDIETRVYNDSI 177

Query: 619 NGTVKNIPEICVRRDGIIRLLKPGESMSNISLDELRDGL 735
           NG VK+IPEICVRRDG IRL+K GES+   SLDELR+GL
Sbjct: 178 NGNVKSIPEICVRRDGRIRLIKNGESIDKTSLDELREGL 216


>ref|XP_002319495.1| predicted protein [Populus trichocarpa] gi|222857871|gb|EEE95418.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score =  276 bits (705), Expect = 9e-72
 Identities = 142/219 (64%), Positives = 167/219 (76%), Gaps = 12/219 (5%)
 Frame = +1

Query: 115 MTSFALRIAKHLSFSVSTRIHYPFV-------AGCGRGGTSLFSTISSGSDNE---NDT- 261
           M+S  LR AK L      R+  P +        G  R   S +ST+S  SDNE   ND  
Sbjct: 1   MSSLVLRFAKLL------RVPSPVIMPTSSLGVGLQRSLRSCYSTVSFNSDNEEGKNDKV 54

Query: 262 -EKVDDFFPPKQELRLQGVDPQKGWEFRGVHKAIICGKIGNVPIQKILRNGRTVTIFTVG 438
            E+ DD    ++E R QGVDP+KGWEFRGVH+AIICGK+G  P+QKILRNGRTVTIFTVG
Sbjct: 55  EEEFDDLLGDRRESRFQGVDPRKGWEFRGVHRAIICGKVGQAPVQKILRNGRTVTIFTVG 114

Query: 439 TGGMFDQRLLGSKDLPKPAQWHRIAVHNDELGAYAIQKFVKNASVYVEGDIETRVYNDSI 618
           TGGMFDQR++GSKDLPKPAQWHRIAVHND LGAYA+Q+  KN+SVYVEGDIE RVYNDSI
Sbjct: 115 TGGMFDQRIIGSKDLPKPAQWHRIAVHNDSLGAYAVQQLAKNSSVYVEGDIEIRVYNDSI 174

Query: 619 NGTVKNIPEICVRRDGIIRLLKPGESMSNISLDELRDGL 735
           +G VKNIPEICVRRDG IRL++ GE++SNIS ++LR+GL
Sbjct: 175 SGEVKNIPEICVRRDGKIRLIRSGENISNISFEDLREGL 213


>ref|XP_002529271.1| Single-stranded DNA-binding protein, mitochondrial precursor,
           putative [Ricinus communis] gi|223531260|gb|EEF33103.1|
           Single-stranded DNA-binding protein, mitochondrial
           precursor, putative [Ricinus communis]
          Length = 213

 Score =  271 bits (693), Expect = 2e-70
 Identities = 137/213 (64%), Positives = 166/213 (77%), Gaps = 6/213 (2%)
 Frame = +1

Query: 115 MTSFALRIAKHLSFSVSTRIHYPFVAGCGRGGTSLFSTISS------GSDNENDTEKVDD 276
           M+S A++ AK L  S         V G  R   +L+ST S       G +NE D E+ DD
Sbjct: 1   MSSLAVKFAKFLRVSSPAATTSSPVVGLQRSFKTLYSTESFSGENDVGKNNELD-EEFDD 59

Query: 277 FFPPKQELRLQGVDPQKGWEFRGVHKAIICGKIGNVPIQKILRNGRTVTIFTVGTGGMFD 456
           F   K EL++QGVDP+KGW FRGVHKAIICGK+G  P+QKILRNGRTVTIFTVGTGGMFD
Sbjct: 60  FLGEKPELQIQGVDPRKGWGFRGVHKAIICGKVGQAPVQKILRNGRTVTIFTVGTGGMFD 119

Query: 457 QRLLGSKDLPKPAQWHRIAVHNDELGAYAIQKFVKNASVYVEGDIETRVYNDSINGTVKN 636
           QR++G+KDLPKPAQWHRIAVHN+ LGAYA+Q+  KN+SVYVEG+IETRVYNDSI+G VKN
Sbjct: 120 QRIVGAKDLPKPAQWHRIAVHNETLGAYAVQQLAKNSSVYVEGEIETRVYNDSISGEVKN 179

Query: 637 IPEICVRRDGIIRLLKPGESMSNISLDELRDGL 735
           IPEIC+RRDG IRL+  G+++S+IS D+LR+GL
Sbjct: 180 IPEICIRRDGKIRLVTSGKNVSDISFDDLREGL 212


>ref|NP_001237927.1| uncharacterized protein LOC100306124 [Glycine max]
           gi|255627623|gb|ACU14156.1| unknown [Glycine max]
          Length = 236

 Score =  270 bits (691), Expect = 4e-70
 Identities = 141/224 (62%), Positives = 162/224 (72%), Gaps = 11/224 (4%)
 Frame = +1

Query: 115 MTSFALRIAKHLSFSVSTRIHYPFVAGCGRGGTSLFSTISSGSD-----------NENDT 261
           M S A+R+ KHL  S  T   +    G  R G S +ST  SG +           NE   
Sbjct: 1   MNSMAVRLVKHLQLSAPTSSSF---GGVPRSGASWYSTSLSGGEYQPSQDNVAPKNEALD 57

Query: 262 EKVDDFFPPKQELRLQGVDPQKGWEFRGVHKAIICGKIGNVPIQKILRNGRTVTIFTVGT 441
            ++DDF   K EL+LQGVDP+KGW FRGVHKAIICGK+G  P+QKILRNGR +TIFTVGT
Sbjct: 58  GELDDFLGEKAELQLQGVDPKKGWGFRGVHKAIICGKVGQAPVQKILRNGRNLTIFTVGT 117

Query: 442 GGMFDQRLLGSKDLPKPAQWHRIAVHNDELGAYAIQKFVKNASVYVEGDIETRVYNDSIN 621
           GGMFDQR+ G KDLPKPAQWHRIAVHND LGAYA+QK  KN+SVYVEGDIE RVYNDSIN
Sbjct: 118 GGMFDQRIQGPKDLPKPAQWHRIAVHNDILGAYAVQKLFKNSSVYVEGDIEIRVYNDSIN 177

Query: 622 GTVKNIPEICVRRDGIIRLLKPGESMSNISLDELRDGLL*LKFD 753
           G VK+IPEICVRRDG I L+K GES+   SLDELR+ ++  K D
Sbjct: 178 GEVKSIPEICVRRDGKICLIKSGESIDKTSLDELRERVVLGKSD 221


>gb|AFK40642.1| unknown [Lotus japonicus]
          Length = 220

 Score =  268 bits (684), Expect = 2e-69
 Identities = 136/219 (62%), Positives = 162/219 (73%), Gaps = 12/219 (5%)
 Frame = +1

Query: 115 MTSFALRIAKHLSFSVSTRIHYPFVAGCGRGGTSLFSTISS------------GSDNEND 258
           M S A+R+AKHL  + +  +    V        S +ST  S            G +NE  
Sbjct: 1   MNSIAVRVAKHLRITSNVGVAGGGVWRRHGPAASWYSTFLSEGEGDQPSRGNGGLNNEEL 60

Query: 259 TEKVDDFFPPKQELRLQGVDPQKGWEFRGVHKAIICGKIGNVPIQKILRNGRTVTIFTVG 438
            E++DDF   K EL+LQGVDP++GW FRGVHKAIICGK+G  P+QKILRNG+ VTIFTVG
Sbjct: 61  DEEIDDFLGGKPELQLQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVG 120

Query: 439 TGGMFDQRLLGSKDLPKPAQWHRIAVHNDELGAYAIQKFVKNASVYVEGDIETRVYNDSI 618
           TGGM DQR++G++D+PKP QWHRIAVHND LGAYA+Q+  KN+SVYVEGDIETRVYNDSI
Sbjct: 121 TGGMSDQRIVGARDMPKPPQWHRIAVHNDVLGAYAVQQICKNSSVYVEGDIETRVYNDSI 180

Query: 619 NGTVKNIPEICVRRDGIIRLLKPGESMSNISLDELRDGL 735
           NG VK+IPEICVRRDG IRL+K GES   ISLDELR+GL
Sbjct: 181 NGEVKSIPEICVRRDGKIRLIKSGESADKISLDELREGL 219


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