BLASTX nr result

ID: Bupleurum21_contig00012514 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012514
         (1444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318826.1| methyl binding domain protein [Populus trich...   128   3e-27
ref|XP_002510809.1| conserved hypothetical protein [Ricinus comm...   123   1e-25
ref|XP_004140849.1| PREDICTED: uncharacterized protein LOC101215...    99   2e-18
ref|XP_002865903.1| hypothetical protein ARALYDRAFT_495292 [Arab...    73   2e-10
emb|CBI34715.3| unnamed protein product [Vitis vinifera]               72   4e-10

>ref|XP_002318826.1| methyl binding domain protein [Populus trichocarpa]
            gi|222859499|gb|EEE97046.1| methyl binding domain protein
            [Populus trichocarpa]
          Length = 762

 Score =  128 bits (322), Expect = 3e-27
 Identities = 121/442 (27%), Positives = 182/442 (41%), Gaps = 55/442 (12%)
 Frame = +3

Query: 3    SGGVTKKNEETLTGNSVVAGSGLNSQNIKSMEQREED-CDSILEN--GAEIHETDKIQRR 173
            SGGV  ++    + +  +   G N    KS   + ED   ++L++    E+ ET K  ++
Sbjct: 358  SGGVGTES----SSSEFLEDKGSNQTEEKSDSVKAEDPLQAVLQDKPSVEVGETKKESKK 413

Query: 174  --VNKSNTKRSSDFPRRASKRLAGVELDPVPELKTNNRTRRLADRHFGEATTSSSCKICD 347
              V KS  K   + PRRASKRLAG+ L P PELK   R RR A     E   S+S +   
Sbjct: 414  TGVRKSRKKTDLNLPRRASKRLAGIPLAPTPELKAATRARRAALEPSNEIVASTSEQASC 473

Query: 348  LPAPEELPGKLEAEIMASEQLRPSTALPLENLANSEQSVGQGSRQISEQLPMEPLPIYKG 527
                 EL  K   +   S ++   +      + + E +   GS +  ++     +    G
Sbjct: 474  GDPDTELNTKHAFDTSKSTEIPVDSNESKHAIVDVEHAGKAGSGKQGDKKHQYDVASPPG 533

Query: 528  HAPEKKPLPASREKAGDEESMMLSRKEQGKKDELRLVLEEKATKDKCANNIDATLESPTS 707
            +        A+ E AG  E+     ++QG                            P  
Sbjct: 534  NL-------ATGEHAGKIETYSTGDEKQGL---------------------------PFD 559

Query: 708  FSMADLWQDPCIEFAIKTLTGAIPLEEENKVEYNSGSSAD-------------------- 827
              + +LWQDPCI FAIKTLTG   +++ + ++ + GSS +                    
Sbjct: 560  LPLEELWQDPCIAFAIKTLTGT-SVDDSDSIKVSPGSSNNEFVGMATLDNHAGKEDIGNN 618

Query: 828  ----------------------------MSFTDLWNDPCIEFAVKTLTGAIPLDEDLNIQ 923
                                        + F D W+DPCIEFA+KTLTGA+PLD D+ +Q
Sbjct: 619  GNLSILEEHARAVGTSNKSDEKPVSPLVLPFADAWSDPCIEFAIKTLTGALPLDFDM-VQ 677

Query: 924  NLFQQQISSPETRGDSGITLPNSDNFCQTDYMTQFCNAVEKPDSNKKQGSAASKLPQTST 1103
            +    Q+ S + +   G TLPN   F QT+++ Q     EKP  N +       LP T  
Sbjct: 678  DYLPPQVRSSQPQESRGFTLPNVGEFRQTEFLCQQFGTSEKPSFN-QAALVGPALPHTKH 736

Query: 1104 GSL--QNSGGPGIRQNIRGRSS 1163
             +L    + GP  R +   RS+
Sbjct: 737  VNLGYAAAAGPSRRLHSEERSN 758


>ref|XP_002510809.1| conserved hypothetical protein [Ricinus communis]
            gi|223549924|gb|EEF51411.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 644

 Score =  123 bits (309), Expect = 1e-25
 Identities = 114/399 (28%), Positives = 160/399 (40%), Gaps = 51/399 (12%)
 Frame = +3

Query: 18   KKNEETLTGNSVVAGSGLNSQNIKSMEQREEDCDSILENGAEIHETDKIQRR-VNKSNTK 194
            K + +T+  + +  G+   + ++ S+EQ  E  +            D I +  + KS  K
Sbjct: 263  KSSSQTVRKSDLTNGALATAVDVLSIEQPSESGEM----------KDVITKAGLGKSKKK 312

Query: 195  RSSDFPRRASKRLAGVELDPVPELKTNNRTRRLADRHFGEATTSSSCKICDLPAPEELPG 374
            +    PRRASKRLAG+ LDP PELKT NR RR A           S  I  +      P 
Sbjct: 313  KDLSLPRRASKRLAGLPLDPTPELKTINRVRRGA--------VGQSNDIAAITDESSSPA 364

Query: 375  KLEAEIMASEQLRPSTALPLENLANSEQSVGQGSRQISEQLPMEPLPIYKGHAPEKKPLP 554
              EA+  +            +N    E + G+              PI   HAP +    
Sbjct: 365  GREAKHASDTS---------KNTKRLESNKGKH-------------PIGHMHAPSELKTE 402

Query: 555  ASREKAGDEESMMLSRKEQGKKDELRLVLEEKATKDKCANNIDATLESPTSFSMADLWQD 734
                +  +  ++  SR    K        EE A   +  NN D  L  P    + +LWQD
Sbjct: 403  NKGNEKHEHPTVSPSRSLTFK--------EEHAGNMETDNNADEKLGVPLDLPLGELWQD 454

Query: 735  PCIEFAIKTLTGAIPLEEENKVEYNSGSS------------------------------- 821
            PCI FAIKTLTG I  E    V+ +SGS+                               
Sbjct: 455  PCIAFAIKTLTG-ISFENSEGVQVSSGSNNSECGGLSALEDNARKEDLQNREPEKQVQHL 513

Query: 822  -------------------ADMSFTDLWNDPCIEFAVKTLTGAIPLDEDLNIQNLFQQQI 944
                                ++ F D W DPCI+FA+KTLTGAIPL  D  IQ+  QQ+ 
Sbjct: 514  SNIISHDVEISNKEKPGSPLNVDFADPWADPCIQFAIKTLTGAIPLACDRVIQDCLQQKA 573

Query: 945  SSPETRGDSGITLPNSDNFCQTDYMTQFCNAVEKPDSNK 1061
            SS +++  SG+ L N     QT+   Q  +   +P  N+
Sbjct: 574  SSSQSQESSGLILQNVGEPDQTEVFCQQFSISPQPSYNQ 612


>ref|XP_004140849.1| PREDICTED: uncharacterized protein LOC101215200 [Cucumis sativus]
          Length = 522

 Score = 99.4 bits (246), Expect = 2e-18
 Identities = 98/345 (28%), Positives = 145/345 (42%), Gaps = 49/345 (14%)
 Frame = +3

Query: 126  LENGAEIHETDKIQRRVNKSNTKRSSDFPRRASKRLAGVELDPVPELKTNNRTRRLADRH 305
            +ENGA   E+ K QR+ N  N       PRRASKRLAG++ +PV ++KT  R R +A   
Sbjct: 177  IENGATKGESRKRQRKTNDIN------LPRRASKRLAGLQAEPVLQVKTGRRARSVACEE 230

Query: 306  FGEATTSSSCKICDLPAPEELPGKLEAEIMASEQLRPSTALPLENLANSEQSVGQGSRQI 485
              +   +S+ K+     PE    K +           STA P   +  S  S G+    +
Sbjct: 231  -SDKQVASTTKLVAFQCPENPDVKHKTN---------STADP-SKINTSPDSGGKAHICV 279

Query: 486  SEQLPMEPLPIYKGHAPEKKPLPASREKAGDEESMMLSRKEQGKKDELRLVLEEKATKDK 665
               + M+   +    A E++P P S     D     +  K  G  +     +E+KA   K
Sbjct: 280  DLSIVMK---MKSADAYEQQPKPESSLPPED-----VLEKHVGMVE-----IEDKANVKK 326

Query: 666  CANNIDATLESPTSFSMADLWQDPCIEFAIKTLTGAI----------------------- 776
                +   +E        DL  DPCI FA+KTLTG +                       
Sbjct: 327  QGPLLKLPME--------DLLTDPCIAFAVKTLTGDVLDASISSDASLTPNHVDPFTPFT 378

Query: 777  ----------------------PLEEENKVEYNSG---SSADMSFTDLWNDPCIEFAVKT 881
                                  P+    KVE N     S+ ++   ++++DPCIEFA+KT
Sbjct: 379  PNERCNSGPENKLNEKVACPELPVARVGKVENNVEKLKSTLELPVGEIFSDPCIEFAIKT 438

Query: 882  LTGAIPLDEDLNIQNLFQQ-QISSPETRGDSGITLPNSDNFCQTD 1013
            LTG IPLD + +I++ F Q   S  E   ++    P  D FC+T+
Sbjct: 439  LTGEIPLDNNRDIEDYFYQFSTSKTEKTNENASDQPGLDYFCKTN 483


>ref|XP_002865903.1| hypothetical protein ARALYDRAFT_495292 [Arabidopsis lyrata subsp.
            lyrata] gi|297311738|gb|EFH42162.1| hypothetical protein
            ARALYDRAFT_495292 [Arabidopsis lyrata subsp. lyrata]
          Length = 680

 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 54/166 (32%), Positives = 76/166 (45%), Gaps = 37/166 (22%)
 Frame = +3

Query: 660  DKCANNIDATLESPTSFSMADLWQDPCIEFAIKTLTG------------AIPLEEE---- 791
            +K  N+  ++ +S    ++ADLW+DPCI FAIKTLTG            + P+       
Sbjct: 516  EKNTNSFSSSFDS----TLADLWKDPCIAFAIKTLTGESLCLPNTPAISSDPINNHAKQK 571

Query: 792  ------------NKVEYNSGSSADMSFTDLWNDPCIEFAVKTLTGAIPLDEDLNIQNLFQ 935
                        N    N G ++    TD+W DPCI+FA+KTLTGAIP+  D        
Sbjct: 572  GVSFIPETSRNVNTGSENPGFTSTPPGTDIWQDPCIDFAIKTLTGAIPIGLD-------- 623

Query: 936  QQISSPETRGDS-GITLPNS--------DNFCQTDYMTQFCNAVEK 1046
                 P+T+  S G+T+  +         N C  +YM Q CN   K
Sbjct: 624  ----EPDTKSKSEGMTITTAATQEAKGRQNNC--EYMVQQCNMKNK 663


>emb|CBI34715.3| unnamed protein product [Vitis vinifera]
          Length = 1076

 Score = 72.0 bits (175), Expect = 4e-10
 Identities = 73/291 (25%), Positives = 126/291 (43%), Gaps = 42/291 (14%)
 Frame = +3

Query: 243  ELDPVPELKTNNRTRRLADRHFGEATTSS---SCKICDLPAPEELPGKLEAEIMA----- 398
            E+ P P  K      +   R    AT S+   S ++ +L  PE    +   ++ +     
Sbjct: 185  EISPPPGAKRQKLMHQKTRRRLFSATASADTGSSEMSNLSLPENQGSRQTKQLFSKPKFA 244

Query: 399  ----SEQLRPSTALPLENLANSEQSVGQGSRQISEQLPMEPLPIYKGHAPEKK------P 548
                +E L+    +  E  A S++S G+ +  + +          KG   + K      P
Sbjct: 245  LEPPTETLQEKLLVENEKYAESKKSSGRRNSDLQKD---------KGSKRKSKNKDCNLP 295

Query: 549  LPASREKAG-----------DEESMMLSRKEQGKKDELRLVLEEKATKDKCAN-NIDATL 692
              +S+  AG            E+++ ++ K  GK + +  +     + D  A   ++  L
Sbjct: 296  CRSSKRLAGLKPDLVGNSGSSEQALAVADKISGKSEVIPALGVVMGSLDNTACCQLEVVL 355

Query: 693  ESPTSFSMADLWQDPC-IEFAIKTLTG----AIPLEEENKVEYNSGSS-------ADMSF 836
            E+      +   + P  +E + K        A+  EE  K+E    +         D  F
Sbjct: 356  EAEPGHHASRAIEAPSDVEQSKKDNRHLEDEAVQEEEAGKLETGKKTGDEPELPPMDFPF 415

Query: 837  TDLWNDPCIEFAVKTLTGAIPLDEDLNIQNLFQQQISSPETRGDSGITLPN 989
             D+W+DPC+EFA KTLTGAIP++++L I+  FQQQI S  T+ +S +TLP+
Sbjct: 416  MDVWSDPCLEFAFKTLTGAIPIEDNLEIEGYFQQQIDSSHTQ-NSSLTLPD 465


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