BLASTX nr result

ID: Bupleurum21_contig00012509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012509
         (1341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82955.1| hypothetical protein VITISV_005180 [Vitis vinifera]   282   2e-73
ref|XP_002323345.1| predicted protein [Populus trichocarpa] gi|1...   278   3e-72
ref|XP_002308351.1| predicted protein [Populus trichocarpa] gi|2...   276   9e-72
ref|XP_003533908.1| PREDICTED: carbon catabolite repressor prote...   274   3e-71
ref|XP_003521518.1| PREDICTED: carbon catabolite repressor prote...   273   6e-71

>emb|CAN82955.1| hypothetical protein VITISV_005180 [Vitis vinifera]
          Length = 622

 Score =  282 bits (721), Expect = 2e-73
 Identities = 165/379 (43%), Positives = 212/379 (55%), Gaps = 37/379 (9%)
 Frame = -2

Query: 1340 RNAHQDTPAWALIWEYRGQNLLNEIIGYNADIVCLQEVQSDHFDTLFKPEMERHGYSSVY 1161
            R+AH   P WAL WEYR +NLL EI GY+ADI+CLQEVQSDH +  FKP++ + GYS  Y
Sbjct: 248  RSAHVKCPGWALAWEYRRKNLLLEITGYDADIICLQEVQSDHLENYFKPKLTKRGYSVTY 307

Query: 1160 KKKT-----------------------------------KEVYTANQYIIDGCAIFFRHD 1086
            KKK                                     +VYTANQ+I DGCA FFRHD
Sbjct: 308  KKKALQQFYEKFTVLVYVSVFLKTLFFKVGVFRCFGHEVPQVYTANQFISDGCATFFRHD 367

Query: 1085 KFKKIIKYELEFDNALLPVVDMLESNQRNEVCFRLMKGNIAVVLILEAVENDSLHNGVKS 906
            +FK+I KYELEFD   L VV+ LE  QR E   RLMKGNIA+V+ILE VEN S     + 
Sbjct: 368  RFKEITKYELEFDKTALSVVEGLEPGQRTEGQIRLMKGNIALVIILERVENGSSLGAFQP 427

Query: 905  RICVANTHIHADSNYQDAKLFQVVNFIKGLEEISNSHIPLIICGDMNSLPRSDPHKFVLE 726
            RICV          Y   +   +++ +  L     +    +I     +   SDPHKF++ 
Sbjct: 428  RICVVLYTFELLQLYLAKRASGIIDSVMLL-----TLRQTLIYMPTQTFQISDPHKFLVT 482

Query: 725  GKLRLVHNK-FRDPLRIQKHLELFHXXXXXXXXXXXXXXEGVETWQKEKMNSHTREPKFT 549
            G++  V +K   DPL I   L+L H                V+  +K+KMN  T+EP FT
Sbjct: 483  GRICPVSSKETADPLGIYNLLKLQHSIPLVSAYSSLLCSGRVKEDEKKKMNQETKEPVFT 542

Query: 548  NFGSGYQRTLDYIFYTEYDLKVDALLELLDKRKIGGPALPSPLWSSDHIALMASFSYREG 369
            N   G   TLDYIF+TE +L+V+ LLELL+   + G ALPSPLWSSDHIALMA+F +++ 
Sbjct: 543  NLSGGNSSTLDYIFHTENNLEVEGLLELLNSETV-GEALPSPLWSSDHIALMANFRFKQA 601

Query: 368  YIGQQHS-TPRNPWEGKTP 315
            +  + HS  P+NPW    P
Sbjct: 602  FCWEPHSPPPQNPWHQAAP 620


>ref|XP_002323345.1| predicted protein [Populus trichocarpa] gi|118486421|gb|ABK95050.1|
            unknown [Populus trichocarpa] gi|222867975|gb|EEF05106.1|
            predicted protein [Populus trichocarpa]
          Length = 603

 Score =  278 bits (710), Expect = 3e-72
 Identities = 152/322 (47%), Positives = 208/322 (64%), Gaps = 10/322 (3%)
 Frame = -2

Query: 1319 PAWALIWEYRGQNLLNEIIGYNADIVCLQEVQSDHFDTLFKPEMERHGYSSVYKKKTKEV 1140
            P+WAL W YR QNLL EI+GY ADIVCLQEVQSDH++  F PE+++HGY ++YK+KT EV
Sbjct: 275  PSWALSWPYRRQNLLREIVGYRADIVCLQEVQSDHYEEFFAPELDKHGYQALYKRKTNEV 334

Query: 1139 YTANQYIIDGCAIFFRHDKFKKIIKYELEFDNALLPVVD-MLESNQRNEVCFRLMKGNIA 963
            Y  N + IDGCA FFR D+F  + KYE+EF+ A   + D ++ S QR     RL+K N+A
Sbjct: 335  YNINTHTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDALVPSAQRKTALNRLVKDNVA 394

Query: 962  VVLILEA-VENDSLHN-GVKSRICVANTHIHADSNYQDAKLFQVVNFIKGLEEI-SNSHI 792
            ++++LEA   N    N G +  +CVANTHI+   + +D KL+QV+  +KGLE+I +++ I
Sbjct: 395  LIVVLEAKFSNQGADNPGKRQLLCVANTHINVHQDLKDVKLWQVLTLLKGLEKIAASADI 454

Query: 791  PLIICGDMNSLPRSDPHKFVLEGKLRLVH-NKFRDPLRI-QKHLELFHXXXXXXXXXXXX 618
            P+++CGD NS+P S PH  +  GK+  +H +   DPL I + H +L H            
Sbjct: 455  PMLVCGDFNSVPGSAPHSLLAMGKVDQLHPDLVVDPLGILRPHSKLTH-QLPLVSAYSSF 513

Query: 617  XXEGV---ETWQKEKMNSHTREPKFTNFGSGYQRTLDYIFYTEYDLKVDALLELLDKRKI 447
               GV      Q+ +M++ T EP FTN    +  TLDYIFYT   L V++LLELLD+  +
Sbjct: 514  ARVGVGLGSDQQRRRMDATTNEPLFTNCTRDFIGTLDYIFYTADSLTVESLLELLDEESL 573

Query: 446  -GGPALPSPLWSSDHIALMASF 384
                ALPSP WSSDHIAL+A F
Sbjct: 574  RKDTALPSPEWSSDHIALLAEF 595


>ref|XP_002308351.1| predicted protein [Populus trichocarpa] gi|222854327|gb|EEE91874.1|
            predicted protein [Populus trichocarpa]
          Length = 602

 Score =  276 bits (706), Expect = 9e-72
 Identities = 151/322 (46%), Positives = 208/322 (64%), Gaps = 10/322 (3%)
 Frame = -2

Query: 1319 PAWALIWEYRGQNLLNEIIGYNADIVCLQEVQSDHFDTLFKPEMERHGYSSVYKKKTKEV 1140
            P+WAL W YR QNLL EI+GY ADIVCLQEVQSDH++  F PE+++HGY ++YK+KT EV
Sbjct: 274  PSWALSWPYRRQNLLREIVGYRADIVCLQEVQSDHYEEFFAPELDKHGYQALYKRKTNEV 333

Query: 1139 YTANQYIIDGCAIFFRHDKFKKIIKYELEFDNALLPVVD-MLESNQRNEVCFRLMKGNIA 963
            Y  N + IDGCA FFR D+F  + KYE+EF+ A   + D ++ S QR     RL+K N+A
Sbjct: 334  YAGNTHTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDALVPSAQRKTALNRLVKDNVA 393

Query: 962  VVLILEA-VENDSLHN-GVKSRICVANTHIHADSNYQDAKLFQVVNFIKGLEEI-SNSHI 792
            ++++LEA   N  + N G +  +CVANTHI+   + +D KL+QV+  +KGLE+I +++ I
Sbjct: 394  LIVVLEAKFSNQGVDNPGKRQLLCVANTHINVHQDLKDVKLWQVLTLLKGLEKIAASADI 453

Query: 791  PLIICGDMNSLPRSDPHKFVLEGKLRLVH-NKFRDPLRI-QKHLELFHXXXXXXXXXXXX 618
            P+++CGD NS+P S PH  +  GK+  +H +   DPL I + H +L H            
Sbjct: 454  PMLVCGDFNSVPGSAPHSLLAMGKVDPLHPDLVVDPLGILRPHNKLTH-QLPLVSAYSSF 512

Query: 617  XXEGV---ETWQKEKMNSHTREPKFTNFGSGYQRTLDYIFYTEYDLKVDALLELLDKRKI 447
               GV      Q+ +M++ T EP FTN    +   LDYIFYT   L V++LLELLD+  +
Sbjct: 513  ARVGVGLGSDQQRRRMDATTNEPLFTNCTRDFIGALDYIFYTADSLMVESLLELLDEESL 572

Query: 446  -GGPALPSPLWSSDHIALMASF 384
                ALPSP WSSDHIAL+A F
Sbjct: 573  RKDTALPSPEWSSDHIALLAEF 594


>ref|XP_003533908.1| PREDICTED: carbon catabolite repressor protein 4 homolog 2-like
            [Glycine max]
          Length = 600

 Score =  274 bits (701), Expect = 3e-71
 Identities = 148/320 (46%), Positives = 202/320 (63%), Gaps = 8/320 (2%)
 Frame = -2

Query: 1319 PAWALIWEYRGQNLLNEIIGYNADIVCLQEVQSDHFDTLFKPEMERHGYSSVYKKKTKEV 1140
            P+WAL W YR QNLL EIIGY  DI+CLQEVQSDH+D  F PE+++HGY  +YK+KT EV
Sbjct: 272  PSWALSWPYRRQNLLREIIGYRPDIICLQEVQSDHYDEFFSPELDKHGYHGLYKRKTNEV 331

Query: 1139 YTANQYIIDGCAIFFRHDKFKKIIKYELEFDNALLPVVD-MLESNQRNEVCFRLMKGNIA 963
            Y+ N   IDGCA FFR D+F  + KYE+EF+ A   + +  + + Q+     RL+K N+A
Sbjct: 332  YSGNTNTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTEATIPTTQKKTALNRLVKDNVA 391

Query: 962  VVLILEA-VENDSLHN-GVKSRICVANTHIHADSNYQDAKLFQVVNFIKGLEEI-SNSHI 792
            ++++LEA V N    N G +  +CVANTH++   + +D KL+QV   +KGLE+I +++ I
Sbjct: 392  LIVVLEAKVNNQPFDNAGKRQLLCVANTHVNVSQDLKDVKLWQVHTLLKGLEKIAASADI 451

Query: 791  PLIICGDMNSLPRSDPHKFVLEGKLRLVHNKFR-DPLRI-QKHLELFHXXXXXXXXXXXX 618
            P+++CGD NS+P S PH  +  GK+   H     DPL I + H +L H            
Sbjct: 452  PMLVCGDFNSVPGSAPHALLAMGKVDPSHPDLAVDPLNILRPHSKLVHQLPLVSAYTSFA 511

Query: 617  XXEGVETWQ-KEKMNSHTREPKFTNFGSGYQRTLDYIFYTEYDLKVDALLELLDKRKI-G 444
               G+   Q K +++  T EP FTN    +  TLDYIFYT   L V++LLELLD+  +  
Sbjct: 512  RTVGLGYEQHKRRLDGGTNEPLFTNVTRDFIGTLDYIFYTADSLVVESLLELLDEESLRK 571

Query: 443  GPALPSPLWSSDHIALMASF 384
              ALPSP WSSDHIAL+A F
Sbjct: 572  DTALPSPEWSSDHIALLAEF 591


>ref|XP_003521518.1| PREDICTED: carbon catabolite repressor protein 4 homolog 2-like
            [Glycine max]
          Length = 602

 Score =  273 bits (699), Expect = 6e-71
 Identities = 147/320 (45%), Positives = 205/320 (64%), Gaps = 8/320 (2%)
 Frame = -2

Query: 1319 PAWALIWEYRGQNLLNEIIGYNADIVCLQEVQSDHFDTLFKPEMERHGYSSVYKKKTKEV 1140
            P+WAL W YR QNLL EI+GY ADI+CLQEVQSDH++  F PE+++HGY  +YKKKT EV
Sbjct: 274  PSWALSWPYRRQNLLREIVGYRADIICLQEVQSDHYEEFFSPELDKHGYYGLYKKKTNEV 333

Query: 1139 YTANQYIIDGCAIFFRHDKFKKIIKYELEFDNALLPVVD-MLESNQRNEVCFRLMKGNIA 963
            Y  N   IDGCA FFR D+F  + KYE+EF+ A   + D ++ + Q+     RL+K N+A
Sbjct: 334  YNGNINTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAVIPTTQKKTALNRLVKDNVA 393

Query: 962  VVLILEA-VENDSLHN-GVKSRICVANTHIHADSNYQDAKLFQVVNFIKGLEEI-SNSHI 792
            ++++LEA V N  + N G +  +CVANTH++   + +D KL+QV   +KGLE+I +++ I
Sbjct: 394  LIVVLEAKVNNQPVDNPGKRQLLCVANTHVNVHHDLKDVKLWQVHTLLKGLEKIAASADI 453

Query: 791  PLIICGDMNSLPRSDPHKFVLEGKLRLVHNKFR-DPLRI-QKHLELFHXXXXXXXXXXXX 618
            P+++CGD NS+P S PH  +  GK+   H     DPL I + H +L H            
Sbjct: 454  PMLVCGDFNSIPGSAPHALLAMGKVDPSHPDLAVDPLNILRPHSKLVHQLPLVSAYSSFA 513

Query: 617  XXEGVETWQ-KEKMNSHTREPKFTNFGSGYQRTLDYIFYTEYDLKVDALLELLDKRKI-G 444
               G+   Q K ++++ T EP FTN    +  +LDYIFYT   L V++LLELLD+  +  
Sbjct: 514  RTVGLGFEQHKGRLDNATNEPLFTNVTRDFIGSLDYIFYTADSLVVESLLELLDEESLRK 573

Query: 443  GPALPSPLWSSDHIALMASF 384
              ALPSP WSSDHIA++A F
Sbjct: 574  DTALPSPEWSSDHIAMLAEF 593


Top