BLASTX nr result

ID: Bupleurum21_contig00012479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012479
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_181456.1| lateral organ junction protein [Arabidopsis tha...    60   1e-07

>ref|NP_181456.1| lateral organ junction protein [Arabidopsis thaliana]
           gi|75100007|sp|O80958.1|PP194_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g39230, mitochondrial; AltName: Full=Protein LATERAL
           ORGAN JUNCTION; Flags: Precursor
           gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis
           thaliana] gi|330254554|gb|AEC09648.1| lateral organ
           junction protein [Arabidopsis thaliana]
          Length = 867

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 41/129 (31%), Positives = 66/129 (51%)
 Frame = +3

Query: 36  NQETQTINPTTPQSNFTSQHHHEKPISKITALSENLTDPTRIDFDPTRLSEVLLSHKNDP 215
           + +++ I+ +T ++  T +  H+  +   + L+   T  T    D  R+ EVLL  +NDP
Sbjct: 36  DNQSRDISDSTTETISTLEFPHKTSVPNHSPLTS--TSETENHVDDARVIEVLLGRRNDP 93

Query: 216 DTAWNYFRSVELKSRSIVRNDPLCVLLHILATSENHHHILEKKISLFVSRNGRLIGPGIV 395
            +A  Y   V+   R     D   VL+HIL +S + H      + +FVS N  LI   +V
Sbjct: 94  VSALQYCNWVKPLHRLCEGGDVFWVLIHILLSSIHTHDRASNLLVMFVSNNPTLIPNVMV 153

Query: 396 DQLVDSAKR 422
           + LVDS+KR
Sbjct: 154 NNLVDSSKR 162


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