BLASTX nr result

ID: Bupleurum21_contig00012443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012443
         (1356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80985.1| hypothetical protein VITISV_034979 [Vitis vinifera]    91   9e-16
emb|CAN61398.1| hypothetical protein VITISV_031827 [Vitis vinifera]    84   8e-14
ref|NP_001241212.1| uncharacterized protein LOC100809651 [Glycin...    81   7e-13
emb|CAN61159.1| hypothetical protein VITISV_007404 [Vitis vinifera]    79   4e-12
ref|XP_003625837.1| F-box/kelch-repeat protein [Medicago truncat...    77   1e-11

>emb|CAN80985.1| hypothetical protein VITISV_034979 [Vitis vinifera]
          Length = 415

 Score = 90.5 bits (223), Expect = 9e-16
 Identities = 100/371 (26%), Positives = 156/371 (42%), Gaps = 39/371 (10%)
 Frame = +1

Query: 46   WSELDPNLLGEIVSRLCLTDQARFIVVCKNWLAAAAH--HPIIKSSSSSLPW---HGCII 210
            WS L  +LL  IV  L L D  R   VCK+WL A  H   PI      +LPW   H   +
Sbjct: 23   WSVLPQDLLRLIVEPLSLVDLIRLRAVCKDWLRAPIHDLQPI-----HNLPWIMNHWFTL 77

Query: 211  PGSSEFQIFDPLSSTPNHLVSVWNISWSNLGIPSPSPK----TIYFSHVKHNWIFLT--- 369
              S    +F+P    P +++   ++    +G+P  S +    T+  S  +  W+  T   
Sbjct: 78   T-SRLCLLFEPFRRLP-YVIEDTHVIPGKMGLPPGSIELPAATVCAS--RFGWVLFTKGL 133

Query: 370  ---IKKNSKLDFCWNSRYSI----------LFSPLTKKVITLPRYDYPRPYK----FVST 498
               + +    D   N R ++          + + LTKK+ITLP    P        F +T
Sbjct: 134  EYCLFRRVVKDMAGNVRVTLYRKVGITRYFVHNVLTKKIITLPGLKAPEHQTLFRDFAAT 193

Query: 499  FSTQPDSPDCVYCMIDACNTKKIAVITYTNGDKEWTAREFNKVPDFRSYICFPLI-IHGI 675
            FS+ P SPDCV+ +     + +I + T++ GDK W    F   P+  SY    ++ + G 
Sbjct: 194  FSSIPTSPDCVFFVSHPSTSDQIFISTHSIGDKSWKTHTFT-CPNASSYSAESVVYMEGS 252

Query: 676  IYIVSRLGQVASYNILNGDFN------FDCLL--RDELFVQNASSNRKMKVFELNEEPMI 831
             Y  S  G +AS+NI   ++       +D  L  R+  F++     R   VF  NE    
Sbjct: 253  FYCFSERGLLASFNIATQEWRPLVSIMWDMPLWPRERYFLE--YGGRLRIVFMENESEY- 309

Query: 832  LYFDPDAKKHVTRPGKQC-IKRYDRSHKVWIPASTLMGYALFFSERIHNVSLINTNDGRN 1008
                          G +C I R+D   +VW+   +L G  +F       VS      G  
Sbjct: 310  -------------SGTECDIFRFDWLDRVWVKMESLEGGVIFLGNPCFGVSA-----GEK 351

Query: 1009 NGVLSNKIYRF 1041
              +++N++Y F
Sbjct: 352  TKMVANRVYYF 362


>emb|CAN61398.1| hypothetical protein VITISV_031827 [Vitis vinifera]
          Length = 371

 Score = 84.0 bits (206), Expect = 8e-14
 Identities = 73/234 (31%), Positives = 114/234 (48%), Gaps = 9/234 (3%)
 Frame = +1

Query: 46  WSELDPNLLGEIVSRLCLTDQARFIVVCKNWLAAAAHHPIIK-SSSSSLPW--HGCIIPG 216
           WS+L P++L  IV RL L D+ RF  VCK WL    H PI        LPW  +    P 
Sbjct: 39  WSDLLPDILRLIVQRLYLGDRIRFQAVCKGWL----HLPITDIQPIEELPWIMNYAFTPT 94

Query: 217 SSEFQIFDPLSSTPNHLVSVWNISWSNLGIPSPSPKTIYFSHV---KHNWIFLTIKKNSK 387
           SS   +F+P    P H+    N S S+L  PS     ++ + V   +  W   + K    
Sbjct: 95  SSVCALFEPSRRLP-HI----NRSKSDLRKPS----KLFLAKVCASRAGWALFSKKAKEP 145

Query: 388 LDFCWNSRYSILFSPLTKKVITLPRYDYPRPYKFVSTFSTQPDSPDCVYCMIDACNTKKI 567
           + F   + Y  +++PL+K++I+LP   +P     V+TFS+ P S DCV+ +       ++
Sbjct: 146 VKF---TSY-FVYNPLSKEIISLPNLKWPY-CNDVATFSSAPTSSDCVFFVPHHYKDGRV 200

Query: 568 AVITYTNGDKEWTAREFNKVPDFRSYICFPLIIHGIIYIVSR---LGQVASYNI 720
            + TY+ G+ EW   EF       S    P+   G++Y+  R   +G++  +NI
Sbjct: 201 FISTYSIGNIEWKTWEF-------SASHRPIQSSGVVYLDGRQSMVGELTCFNI 247


>ref|NP_001241212.1| uncharacterized protein LOC100809651 [Glycine max]
            gi|255641457|gb|ACU21004.1| unknown [Glycine max]
          Length = 376

 Score = 80.9 bits (198), Expect = 7e-13
 Identities = 86/350 (24%), Positives = 143/350 (40%), Gaps = 5/350 (1%)
 Frame = +1

Query: 43   SWSELDPNLLGEIVSRLCLTDQARFIVVCKNWLAAAAHHPIIKSSSSSLPWHGCIIPGSS 222
            +WS+L   LL  I+SRL L D  R  VVCK W + A    ++  S    PW         
Sbjct: 35   TWSDLPTELLELILSRLSLDDNVRASVVCKRWHSVATSVCVVNQS----PWLMYFPKFGD 90

Query: 223  EFQIFDPLSSTPNHLVSVWNISWSNLGIPSPSPKTIYFSHVKHNWIFLTIKKNSKLDFCW 402
             ++ +DP                    I  P  +     + K  W+ L   +  ++ F  
Sbjct: 91   WYEFYDPAHR-------------KTYSIELPELRGSRVCYTKDGWLLLYRPRTHRVFF-- 135

Query: 403  NSRYSILFSPLTKKVITLPRYDYPRPYKFVSTFSTQPDSPDCVYCMIDACNTKKIAVITY 582
                   F+P T ++I LPR++    Y+ V+ FS  P SPDCV   +   +   +A+ T 
Sbjct: 136  -------FNPFTMEIIKLPRFE--MSYQIVA-FSCAPTSPDCVLFTVKHVSPTVVAISTC 185

Query: 583  TNGDKEWTAREFNKVPDFRSYICFPLII-HGIIYIVSRLGQVASYNILNGDFNFDCL--- 750
              G  EWT   +     F S I   L+  +G+ Y +S  G +  +N     ++   +   
Sbjct: 186  YPGATEWTTLSYQNRLPFVSSIWNKLVFCNGLFYCLSLTGWLGVFNSSERTWSVLSVPPP 245

Query: 751  -LRDELFVQNASSNRKMKVFELNEEPMILYFDPDAKKHVTRPGKQCIKRYDRSHKVWIPA 927
               +  F +N     K K    +E  +I+ +   ++  +       I + D+    W   
Sbjct: 246  KCPENFFAKNW---WKGKFMTEHEGDIIVIYTCSSENPI-------IFKLDQMLMEWEEM 295

Query: 928  STLMGYALFFSERIHNVSLINTNDGRNNGVLSNKIYRFFNGGCHVYSLED 1077
            +TL G  LF S  + + + I+      N V  +K+ RF+   C  +SL+D
Sbjct: 296  TTLDGVTLFAS-FLSSHARIDLPGIMRNSVYFSKV-RFYGKRCISFSLDD 343


>emb|CAN61159.1| hypothetical protein VITISV_007404 [Vitis vinifera]
          Length = 363

 Score = 78.6 bits (192), Expect = 4e-12
 Identities = 62/228 (27%), Positives = 112/228 (49%), Gaps = 15/228 (6%)
 Frame = +1

Query: 403  NSRYSILFSPLTKKVITLPRYDYPRP--YKFV----STFSTQPDSPDCVYCMIDACNTKK 564
            N  +  +++PLTK++I+LPR+ + R   +K++    +TFS+ P SPDCV+ +   C+ ++
Sbjct: 93   NVTFYYVYNPLTKEIISLPRFKWQRAQRHKYLPEKQATFSSVPTSPDCVFIVAHICDREE 152

Query: 565  IAVITYTNGDKEWTAREFNK-----VPDFRSYICFPLIIHGIIYIVSRLGQVASYNILNG 729
            I + TY+NGD EW  R+         P++R      + + G  Y  S  G ++S+N+   
Sbjct: 153  IFISTYSNGDTEWETRDVTPPHPCFFPNYRM-----VYMEGTFYCYSEEGALSSFNVATQ 207

Query: 730  DFNFDCLLRDELFVQNA---SSNRKMKVFELNEEPMILYFDPDAKKHVTRPGKQC-IKRY 897
            +++    L  E   +N    S    M  F      + L    + + +V  P  +C I R+
Sbjct: 208  EWS----LLTECNSKNCWDWSYVGGMLYFLAYGGHLCLVELRELEFNVDMP--ECNIYRF 261

Query: 898  DRSHKVWIPASTLMGYALFFSERIHNVSLINTNDGRNNGVLSNKIYRF 1041
            D   +VW    +L G A+F  +    +S      G    +++N++Y F
Sbjct: 262  DSLDRVWKKMESLEGGAIFLGKFSFGISA-----GEQTKMVANRVYYF 304


>ref|XP_003625837.1| F-box/kelch-repeat protein [Medicago truncatula]
            gi|355500852|gb|AES82055.1| F-box/kelch-repeat protein
            [Medicago truncatula]
          Length = 820

 Score = 76.6 bits (187), Expect = 1e-11
 Identities = 76/350 (21%), Positives = 142/350 (40%), Gaps = 5/350 (1%)
 Frame = +1

Query: 43   SWSELDPNLLGEIVSRLCLTDQARFIVVCKNWLAAAAHHPIIKSSSSSLPWHGCIIPGSS 222
            +W++L   +L   +SRL + D  R   VCK W + A    ++  S    PW        +
Sbjct: 474  TWADLPAEVLELFLSRLDIGDNIRASAVCKRWCSVATSVRVLDQS----PWLMYFPKKGN 529

Query: 223  EFQIFDPLSSTPNHLVSVWNISWSNLGIPSPSPKTIYFSHVKHNWIFLTIKKNSKLDFCW 402
             +  +DP             +      +  P        + K  W+ L  +   +LD   
Sbjct: 530  CYDFYDP-------------VQRKTYSLELPELDGCRVCYTKDGWLLLNRQDWRRLD--- 573

Query: 403  NSRYSILFSPLTKKVITLPRYDYPRPYKFVSTFSTQPDSPDCVYCMIDACNTKKIAVITY 582
             +    LF+P T+ +ITLP++D  R Y+ ++ FS  P S  CV  +     +  +A+ T 
Sbjct: 574  GNHIFSLFNPFTRDLITLPKFD--RTYQ-IAAFSCAPTSTGCVILIFRRVGSSLVAISTC 630

Query: 583  TNGDKEWTAREFNKVPDFRSYICFPLII-HGIIYIVSRLGQVASYNILNGDFNFDCLLRD 759
              G+KEWT   ++   +    +C  L+  +G+ Y +S  G +  ++ L   +    +   
Sbjct: 631  YPGEKEWTTVNYD--AELSCSMCDKLVFSNGLFYCLSDRGWLGVFDPLERTWTVFKVPPP 688

Query: 760  ELFVQNASSNRKMKVFELNEEPMILYFDPDAKKHVTRPGKQCIKRYDRSHKVWIPASTLM 939
            +   +++++    K   + E    ++       H+       I + D +   W    +L 
Sbjct: 689  KCLAESSTAKNWSKGKFMIEHKGNIFV-----VHICCGEDPIIFKLDLTLMEWKEVRSLN 743

Query: 940  GYALFFSERIHNVSLINTNDGRNNGVLSNKIY----RFFNGGCHVYSLED 1077
            G  LF S       L + +     G++ N +Y    RF+   C  +SL+D
Sbjct: 744  GVTLFAS------FLSSHSRTYATGIMRNSVYFPKVRFYGKRCISFSLDD 787


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