BLASTX nr result

ID: Bupleurum21_contig00012431 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012431
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275849.2| PREDICTED: putative Holliday junction resolv...   211   5e-53
emb|CBI16584.3| unnamed protein product [Vitis vinifera]              211   5e-53
ref|XP_003521987.1| PREDICTED: putative Holliday junction resolv...   206   3e-51
ref|XP_002328785.1| predicted protein [Populus trichocarpa] gi|2...   204   6e-51
emb|CAN65349.1| hypothetical protein VITISV_000639 [Vitis vinifera]   200   1e-49

>ref|XP_002275849.2| PREDICTED: putative Holliday junction resolvase [Vitis vinifera]
          Length = 229

 Score =  211 bits (538), Expect = 5e-53
 Identities = 110/153 (71%), Positives = 120/153 (78%)
 Frame = -3

Query: 461 LSLQEIPPNALLRKRNSSWRGGFSLGVDLGNSRTGLALSKGFSIRPXXXXXXXXXXXXXX 282
           +SL EI PNAL RK N  W GGFSLGVDLG SRTGLALSKGFS+RP              
Sbjct: 39  VSLNEILPNALRRKHNPHWTGGFSLGVDLGMSRTGLALSKGFSVRPLSVLKLRGQKLELQ 98

Query: 281 XLDIAQKEEVDEFIIGLPISSDGKETTQSNIVRSIAGRFAVRAAERGWRVYLQDEHGTSA 102
            L+IA +EEVDEFIIGLP+S DGKET QSN VRS+AGR A RAAERGWRVYLQDEHGTS 
Sbjct: 99  LLEIAGREEVDEFIIGLPVSDDGKETPQSNKVRSVAGRLAARAAERGWRVYLQDEHGTSE 158

Query: 101 DAMDLMIDVGLNKSARQNSIDAYAAMMVLERYF 3
           +A+ LMID+G +KSARQN IDAYAAMMVLERYF
Sbjct: 159 EALSLMIDMGHSKSARQNRIDAYAAMMVLERYF 191


>emb|CBI16584.3| unnamed protein product [Vitis vinifera]
          Length = 679

 Score =  211 bits (538), Expect = 5e-53
 Identities = 110/153 (71%), Positives = 120/153 (78%)
 Frame = -3

Query: 461 LSLQEIPPNALLRKRNSSWRGGFSLGVDLGNSRTGLALSKGFSIRPXXXXXXXXXXXXXX 282
           +SL EI PNAL RK N  W GGFSLGVDLG SRTGLALSKGFS+RP              
Sbjct: 489 VSLNEILPNALRRKHNPHWTGGFSLGVDLGMSRTGLALSKGFSVRPLSVLKLRGQKLELQ 548

Query: 281 XLDIAQKEEVDEFIIGLPISSDGKETTQSNIVRSIAGRFAVRAAERGWRVYLQDEHGTSA 102
            L+IA +EEVDEFIIGLP+S DGKET QSN VRS+AGR A RAAERGWRVYLQDEHGTS 
Sbjct: 549 LLEIAGREEVDEFIIGLPVSDDGKETPQSNKVRSVAGRLAARAAERGWRVYLQDEHGTSE 608

Query: 101 DAMDLMIDVGLNKSARQNSIDAYAAMMVLERYF 3
           +A+ LMID+G +KSARQN IDAYAAMMVLERYF
Sbjct: 609 EALSLMIDMGHSKSARQNRIDAYAAMMVLERYF 641


>ref|XP_003521987.1| PREDICTED: putative Holliday junction resolvase-like [Glycine max]
          Length = 226

 Score =  206 bits (523), Expect = 3e-51
 Identities = 104/153 (67%), Positives = 122/153 (79%)
 Frame = -3

Query: 461 LSLQEIPPNALLRKRNSSWRGGFSLGVDLGNSRTGLALSKGFSIRPXXXXXXXXXXXXXX 282
           L+L E+PPNAL +KR   WRGGFSLG+DLG +RTGLALSKGFSIRP              
Sbjct: 38  LTLDELPPNALRKKREPQWRGGFSLGLDLGLARTGLALSKGFSIRPLTVLELRGQKLEVQ 97

Query: 281 XLDIAQKEEVDEFIIGLPISSDGKETTQSNIVRSIAGRFAVRAAERGWRVYLQDEHGTSA 102
            ++IA++EEVDEFIIGLP SSDGKET QSN VRS+AGR AVRAAERGWRVYLQDEHGT+ 
Sbjct: 98  IINIAEEEEVDEFIIGLPKSSDGKETPQSNKVRSVAGRLAVRAAERGWRVYLQDEHGTTE 157

Query: 101 DAMDLMIDVGLNKSARQNSIDAYAAMMVLERYF 3
           +A D MI++ L+KS++Q  +DAYAAMMVLERYF
Sbjct: 158 EAKDRMINMSLSKSSQQKKLDAYAAMMVLERYF 190


>ref|XP_002328785.1| predicted protein [Populus trichocarpa] gi|222839083|gb|EEE77434.1|
           predicted protein [Populus trichocarpa]
          Length = 254

 Score =  204 bits (520), Expect = 6e-51
 Identities = 105/153 (68%), Positives = 119/153 (77%)
 Frame = -3

Query: 461 LSLQEIPPNALLRKRNSSWRGGFSLGVDLGNSRTGLALSKGFSIRPXXXXXXXXXXXXXX 282
           LS+ EIPPNAL RK +  WRGGFSLGVDLG SR+G+ALSKGF++RP              
Sbjct: 68  LSIHEIPPNALRRKNDPLWRGGFSLGVDLGLSRSGVALSKGFTVRPLTVLELRGQKLELR 127

Query: 281 XLDIAQKEEVDEFIIGLPISSDGKETTQSNIVRSIAGRFAVRAAERGWRVYLQDEHGTSA 102
            L+IA+ EEVDEFIIGLP S DGKET QSN VRS+AGRFAV AA RGWRVYLQDEHGTS 
Sbjct: 128 LLEIAENEEVDEFIIGLPKSWDGKETPQSNKVRSVAGRFAVLAAHRGWRVYLQDEHGTST 187

Query: 101 DAMDLMIDVGLNKSARQNSIDAYAAMMVLERYF 3
           +A + MID+GLNKS RQ  +DAYAA+MVLERYF
Sbjct: 188 EATNRMIDMGLNKSTRQKKVDAYAAVMVLERYF 220


>emb|CAN65349.1| hypothetical protein VITISV_000639 [Vitis vinifera]
          Length = 213

 Score =  200 bits (508), Expect = 1e-49
 Identities = 106/153 (69%), Positives = 114/153 (74%)
 Frame = -3

Query: 461 LSLQEIPPNALLRKRNSSWRGGFSLGVDLGNSRTGLALSKGFSIRPXXXXXXXXXXXXXX 282
           +SL EI PNAL RK N  W GGFSLGVDLG SRTGLALSKGFS+RP              
Sbjct: 43  VSLNEILPNALRRKHNPHWTGGFSLGVDLGMSRTGLALSKGFSVRPL------------- 89

Query: 281 XLDIAQKEEVDEFIIGLPISSDGKETTQSNIVRSIAGRFAVRAAERGWRVYLQDEHGTSA 102
                   EVDEFIIGLP+S DGKET QSN VRS+AGR A RAAERGWRVYLQDEHGTS 
Sbjct: 90  -------SEVDEFIIGLPVSDDGKETPQSNKVRSVAGRLAARAAERGWRVYLQDEHGTSE 142

Query: 101 DAMDLMIDVGLNKSARQNSIDAYAAMMVLERYF 3
           +A+  MID+G +KSARQNSIDAYAAMMVLERYF
Sbjct: 143 EALSFMIDMGHSKSARQNSIDAYAAMMVLERYF 175


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