BLASTX nr result

ID: Bupleurum21_contig00012426 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012426
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC66515.1| hypothetical protein OsI_32632 [Oryza sativa Indi...    69   4e-10
gb|AAM08745.1|AC025098_12 Unknown protein [Oryza sativa Japonica...    67   1e-09
gb|EAZ39347.1| hypothetical protein OsJ_23773 [Oryza sativa Japo...    67   1e-09
ref|XP_003529796.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    66   3e-09
ref|XP_003531612.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    64   1e-08

>gb|EEC66515.1| hypothetical protein OsI_32632 [Oryza sativa Indica Group]
          Length = 492

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
 Frame = -2

Query: 225 LKNKKQRVEVEGMDRISGLSDELIHHILSHLDAQLAVQLCIISKRWRYVWKTLPFL--DF 52
           L+  K  V    MDRISGL D+++HHI+S L+A+ AVQ C++S+RWR +W+T+P +  DF
Sbjct: 77  LRRVKAHVRAARMDRISGLPDKILHHIMSFLNARQAVQTCVLSRRWRNLWRTMPCINADF 136

Query: 51  SRY 43
             +
Sbjct: 137 DEF 139


>gb|AAM08745.1|AC025098_12 Unknown protein [Oryza sativa Japonica Group]
           gi|31429988|gb|AAP51965.1| F-box domain containing
           protein, expressed [Oryza sativa Japonica Group]
          Length = 949

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
 Frame = -2

Query: 225 LKNKKQRVEVEGMDRISGLSDELIHHILSHLDAQLAVQLCIISKRWRYVWKTLPFL--DF 52
           L+  K  V    MDRISGL D+++HHI+S L+ + AVQ C++S+RWR +W+T+P +  DF
Sbjct: 77  LRRVKAHVRAARMDRISGLPDKILHHIMSFLNTRQAVQTCVLSRRWRNLWRTMPCINADF 136

Query: 51  SRY 43
             +
Sbjct: 137 DEF 139



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 25/53 (47%), Positives = 38/53 (71%)
 Frame = -2

Query: 213 KQRVEVEGMDRISGLSDELIHHILSHLDAQLAVQLCIISKRWRYVWKTLPFLD 55
           K      GMD IS L DE++H I+S L+A+ AVQ C++S+RWR +W+T+P ++
Sbjct: 540 KTPAHAAGMDWISDLPDEILHRIMSFLNARQAVQTCVLSRRWRNLWRTVPCIN 592


>gb|EAZ39347.1| hypothetical protein OsJ_23773 [Oryza sativa Japonica Group]
          Length = 941

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
 Frame = -2

Query: 225 LKNKKQRVEVEGMDRISGLSDELIHHILSHLDAQLAVQLCIISKRWRYVWKTLPFL--DF 52
           L+  K  V    MDRISGL D+++HHI+S L+ + AVQ C++S+RWR +W+T+P +  DF
Sbjct: 77  LRRVKAHVRAARMDRISGLPDKILHHIMSFLNTRQAVQTCVLSRRWRNLWRTMPCINADF 136

Query: 51  SRY 43
             +
Sbjct: 137 DEF 139



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 25/53 (47%), Positives = 38/53 (71%)
 Frame = -2

Query: 213 KQRVEVEGMDRISGLSDELIHHILSHLDAQLAVQLCIISKRWRYVWKTLPFLD 55
           K      GMD IS L DE++H I+S L+A+ AVQ C++S+RWR +W+T+P ++
Sbjct: 532 KTPAHAAGMDWISDLPDEILHRIMSFLNARQAVQTCVLSRRWRNLWRTVPCIN 584


>ref|XP_003529796.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At1g78840-like
           [Glycine max]
          Length = 449

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/65 (46%), Positives = 44/65 (67%)
 Frame = -2

Query: 195 EGMDRISGLSDELIHHILSHLDAQLAVQLCIISKRWRYVWKTLPFLDFSRYTPQFLSNVT 16
           E  DR+S + D LIHHILS ++ + A+Q C++SKRWRY+W ++P L FS  +  F+  V 
Sbjct: 53  ESQDRLSDMPDCLIHHILSFMETKDAIQTCVLSKRWRYLWASVPCLSFS--SKSFMRLVN 110

Query: 15  LTQFV 1
             +FV
Sbjct: 111 FKKFV 115


>ref|XP_003531612.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At1g78840-like
           [Glycine max]
          Length = 450

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/65 (44%), Positives = 45/65 (69%)
 Frame = -2

Query: 195 EGMDRISGLSDELIHHILSHLDAQLAVQLCIISKRWRYVWKTLPFLDFSRYTPQFLSNVT 16
           E  DR+S + D +IHHILS ++ + A+Q C++SKRWRY+W ++P L+FS  +  F+  V 
Sbjct: 53  ESEDRLSDMPDCIIHHILSFMETKDAIQTCVLSKRWRYLWASVPCLNFS--SKSFMRLVD 110

Query: 15  LTQFV 1
             +FV
Sbjct: 111 FKKFV 115


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