BLASTX nr result

ID: Bupleurum21_contig00012419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012419
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632726.1| PREDICTED: protein GAST1-like [Vitis vinifer...   114   8e-24
ref|XP_004158330.1| PREDICTED: protein GAST1-like [Cucumis sativus]   110   2e-22
emb|CBI30071.3| unnamed protein product [Vitis vinifera]              108   3e-22
ref|XP_003625068.1| Gibberellin induced protein [Medicago trunca...   105   5e-21
gb|AFK49188.1| unknown [Lotus japonicus]                              103   2e-20

>ref|XP_003632726.1| PREDICTED: protein GAST1-like [Vitis vinifera]
           gi|147845801|emb|CAN80098.1| hypothetical protein
           VITISV_028566 [Vitis vinifera]
          Length = 114

 Score =  114 bits (285), Expect = 8e-24
 Identities = 54/90 (60%), Positives = 68/90 (75%)
 Frame = -2

Query: 270 MAKKQILVTTFIAIVLLLLGDFNNAIIMESPTVPEAPQPSADLPMNGGTPGSVQPQDCGP 91
           MA+K  +V   ++++LLLL   NNA I E+PT P+  Q +   PM+G T GS+ PQ+C P
Sbjct: 1   MARKLSIVMLSLSMMLLLLVQ-NNATITEAPT-PQPQQSTNGFPMHGVTQGSLHPQECAP 58

Query: 90  RCTGRCAKTAFKKPCMFFCQKCCAKCLCVP 1
           RCT RC+KTA+KKPCMFFCQKCCAKCLCVP
Sbjct: 59  RCTTRCSKTAYKKPCMFFCQKCCAKCLCVP 88


>ref|XP_004158330.1| PREDICTED: protein GAST1-like [Cucumis sativus]
          Length = 117

 Score =  110 bits (274), Expect = 2e-22
 Identities = 50/91 (54%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
 Frame = -2

Query: 270 MAKKQIL-VTTFIAIVLLLLGDFNNAIIMESPTVPEAPQPSADLPMNGGTPGSVQPQDCG 94
           M +KQ++ +  F+ ++L  +   +N  I E+PT       +   PM+G T GS+QPQ+CG
Sbjct: 1   MRRKQVIEILLFVVMLLNCVLLVHNLAISEAPTPQPQTSSNYSNPMHGVTEGSLQPQECG 60

Query: 93  PRCTGRCAKTAFKKPCMFFCQKCCAKCLCVP 1
            RCTGRC+KTAFKKPCMFFCQKCCAKCLCVP
Sbjct: 61  ARCTGRCSKTAFKKPCMFFCQKCCAKCLCVP 91


>emb|CBI30071.3| unnamed protein product [Vitis vinifera]
          Length = 106

 Score =  108 bits (271), Expect = 3e-22
 Identities = 50/79 (63%), Positives = 62/79 (78%)
 Frame = -2

Query: 237 IAIVLLLLGDFNNAIIMESPTVPEAPQPSADLPMNGGTPGSVQPQDCGPRCTGRCAKTAF 58
           ++++LLLL   NNA I E+PT P+  Q +   PM+G T GS+ PQ+C PRCT RC+KTA+
Sbjct: 4   LSMMLLLLVQ-NNATITEAPT-PQPQQSTNGFPMHGVTQGSLHPQECAPRCTTRCSKTAY 61

Query: 57  KKPCMFFCQKCCAKCLCVP 1
           KKPCMFFCQKCCAKCLCVP
Sbjct: 62  KKPCMFFCQKCCAKCLCVP 80


>ref|XP_003625068.1| Gibberellin induced protein [Medicago truncatula]
           gi|87241442|gb|ABD33300.1| Gibberellin regulated protein
           [Medicago truncatula] gi|355500083|gb|AES81286.1|
           Gibberellin induced protein [Medicago truncatula]
          Length = 120

 Score =  105 bits (261), Expect = 5e-21
 Identities = 51/95 (53%), Positives = 64/95 (67%), Gaps = 5/95 (5%)
 Frame = -2

Query: 270 MAKKQILVTTFIAIVLLLLGDFNNAIIMESPTVPEAPQPSAD-----LPMNGGTPGSVQP 106
           MA+K  +V  F+ + +LLL   N+A I+ S     APQPS        P +G T GS+QP
Sbjct: 1   MARKMCIVVLFL-VQMLLLPLQNHAEIVVSTVEAPAPQPSKSSGTNQFPNHGITEGSLQP 59

Query: 105 QDCGPRCTGRCAKTAFKKPCMFFCQKCCAKCLCVP 1
           Q+CGPRCT RC+ T +KKPC+FFC KCCAKCLCVP
Sbjct: 60  QECGPRCTNRCSNTQYKKPCLFFCNKCCAKCLCVP 94


>gb|AFK49188.1| unknown [Lotus japonicus]
          Length = 118

 Score =  103 bits (256), Expect = 2e-20
 Identities = 50/93 (53%), Positives = 64/93 (68%), Gaps = 3/93 (3%)
 Frame = -2

Query: 270 MAKKQILVTTFIAIVLLLLGDFNNAIIMESPTVPEAPQPS---ADLPMNGGTPGSVQPQD 100
           MAKK  LV   + + +LLL   N+A I+ +P    +PQP+   A  P +G T GS+QPQ+
Sbjct: 1   MAKKLCLVILCL-VQMLLLPVENHAEIVVTPIEAPSPQPANNTAQFPNHGITEGSLQPQE 59

Query: 99  CGPRCTGRCAKTAFKKPCMFFCQKCCAKCLCVP 1
           CGPRC  RC+ T +KKPC+FFC KCCAKCLCVP
Sbjct: 60  CGPRCANRCSNTQYKKPCLFFCNKCCAKCLCVP 92


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