BLASTX nr result

ID: Bupleurum21_contig00012412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012412
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003622446.1| Proteasome subunit beta type [Medicago trunc...   331   5e-89
ref|NP_198874.1| proteasome subunit beta type-7-B [Arabidopsis t...   330   1e-88
gb|AFK37472.1| unknown [Medicago truncatula]                          330   1e-88
ref|XP_003622316.1| Proteasome subunit beta type [Medicago trunc...   330   1e-88
gb|ACJ84568.1| unknown [Medicago truncatula]                          330   1e-88

>ref|XP_003622446.1| Proteasome subunit beta type [Medicago truncatula]
           gi|124359794|gb|ABN06120.1| Peptidase T1A, proteasome
           beta-subunit [Medicago truncatula]
           gi|355497461|gb|AES78664.1| Proteasome subunit beta type
           [Medicago truncatula]
          Length = 271

 Score =  331 bits (848), Expect = 5e-89
 Identities = 160/181 (88%), Positives = 173/181 (95%)
 Frame = -1

Query: 545 MTKVDVDVPAKGGFSFDLCRRNEMLMKKGLKPSSFLKTGTTIVGLIFKDGVILGADTRAT 366
           MTK  +DVP KGGFSFDLCRRN+ML KKGLK  S+LKTGTTIVGL+F+DG+ILGADTRAT
Sbjct: 1   MTK-SLDVPPKGGFSFDLCRRNDMLEKKGLKSPSYLKTGTTIVGLVFQDGIILGADTRAT 59

Query: 365 EGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDNISSQLKLHRYHTGRESRVVTALT 186
           EGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTD +SSQL+LHRYHTGRESRVVTALT
Sbjct: 60  EGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALT 119

Query: 185 LLKTHLFSYQGHVSAALVLGGVDVTGPHLHTIYPHGSTDSLPFATMGSGSLAAMAVFESR 6
           LLK HLF+YQGHVSAALVLGGVD+TGPHLHTIYPHGSTD+LPFATMGSGSLAAM+VFES+
Sbjct: 120 LLKRHLFNYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFESK 179

Query: 5   Y 3
           Y
Sbjct: 180 Y 180


>ref|NP_198874.1| proteasome subunit beta type-7-B [Arabidopsis thaliana]
           gi|30693626|ref|NP_851108.1| proteasome subunit beta
           type-7-B [Arabidopsis thaliana]
           gi|82581524|sp|Q7DLS1.2|PSB7B_ARATH RecName:
           Full=Proteasome subunit beta type-7-B; AltName: Full=20S
           proteasome beta subunit B-2; AltName: Full=Proteasome
           component FC; AltName: Full=Proteasome subunit beta
           type-2; Flags: Precursor gi|3421104|gb|AAC32067.1| 20S
           proteasome beta subunit PBB2 [Arabidopsis thaliana]
           gi|9758084|dbj|BAB08528.1| 20S proteasome beta subunit
           PBB2 [Arabidopsis thaliana] gi|332007184|gb|AED94567.1|
           proteasome subunit beta type-7-B [Arabidopsis thaliana]
           gi|332007185|gb|AED94568.1| proteasome subunit beta
           type-7-B [Arabidopsis thaliana]
          Length = 274

 Score =  330 bits (845), Expect = 1e-88
 Identities = 158/181 (87%), Positives = 172/181 (95%)
 Frame = -1

Query: 545 MTKVDVDVPAKGGFSFDLCRRNEMLMKKGLKPSSFLKTGTTIVGLIFKDGVILGADTRAT 366
           M++  VD+P KGGFSFDLC+RN+ML +KGLK  SFLKTGTTIVGLIFKDGVILGADTRAT
Sbjct: 1   MSQSSVDIPPKGGFSFDLCKRNDMLTQKGLKAPSFLKTGTTIVGLIFKDGVILGADTRAT 60

Query: 365 EGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDNISSQLKLHRYHTGRESRVVTALT 186
           EGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTD +SSQL+LHRY TGR+SRVVTALT
Sbjct: 61  EGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVVTALT 120

Query: 185 LLKTHLFSYQGHVSAALVLGGVDVTGPHLHTIYPHGSTDSLPFATMGSGSLAAMAVFESR 6
           LLK HLFSYQGHVSAALVLGGVD+TGPHLHTIYPHGSTD+LPFATMGSGSLAAM+VFE++
Sbjct: 121 LLKKHLFSYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAK 180

Query: 5   Y 3
           Y
Sbjct: 181 Y 181


>gb|AFK37472.1| unknown [Medicago truncatula]
          Length = 271

 Score =  330 bits (845), Expect = 1e-88
 Identities = 159/181 (87%), Positives = 173/181 (95%)
 Frame = -1

Query: 545 MTKVDVDVPAKGGFSFDLCRRNEMLMKKGLKPSSFLKTGTTIVGLIFKDGVILGADTRAT 366
           MTK  VD+P KGGFSFDLCRRN+ML KKGLK  ++LKTGTTIVGL+F+DG+ILGADTRAT
Sbjct: 1   MTK-SVDLPPKGGFSFDLCRRNDMLEKKGLKAPTYLKTGTTIVGLVFQDGIILGADTRAT 59

Query: 365 EGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDNISSQLKLHRYHTGRESRVVTALT 186
           EGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTD +SSQL+LHRYHTGRESRVVTALT
Sbjct: 60  EGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALT 119

Query: 185 LLKTHLFSYQGHVSAALVLGGVDVTGPHLHTIYPHGSTDSLPFATMGSGSLAAMAVFESR 6
           LLK HLF+YQGHVSAALVLGGVD+TGPHLHTIYPHGSTD+LPFATMGSGSLAAM+VFES+
Sbjct: 120 LLKRHLFNYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFESK 179

Query: 5   Y 3
           Y
Sbjct: 180 Y 180


>ref|XP_003622316.1| Proteasome subunit beta type [Medicago truncatula]
           gi|355497331|gb|AES78534.1| Proteasome subunit beta type
           [Medicago truncatula]
          Length = 271

 Score =  330 bits (845), Expect = 1e-88
 Identities = 159/181 (87%), Positives = 173/181 (95%)
 Frame = -1

Query: 545 MTKVDVDVPAKGGFSFDLCRRNEMLMKKGLKPSSFLKTGTTIVGLIFKDGVILGADTRAT 366
           MTK  VD+P KGGFSFDLCRRN+ML KKGLK  ++LKTGTTIVGL+F+DG+ILGADTRAT
Sbjct: 1   MTK-SVDLPPKGGFSFDLCRRNDMLEKKGLKAPTYLKTGTTIVGLVFQDGIILGADTRAT 59

Query: 365 EGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDNISSQLKLHRYHTGRESRVVTALT 186
           EGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTD +SSQL+LHRYHTGRESRVVTALT
Sbjct: 60  EGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALT 119

Query: 185 LLKTHLFSYQGHVSAALVLGGVDVTGPHLHTIYPHGSTDSLPFATMGSGSLAAMAVFESR 6
           LLK HLF+YQGHVSAALVLGGVD+TGPHLHTIYPHGSTD+LPFATMGSGSLAAM+VFES+
Sbjct: 120 LLKRHLFNYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFESK 179

Query: 5   Y 3
           Y
Sbjct: 180 Y 180


>gb|ACJ84568.1| unknown [Medicago truncatula]
          Length = 271

 Score =  330 bits (845), Expect = 1e-88
 Identities = 159/181 (87%), Positives = 173/181 (95%)
 Frame = -1

Query: 545 MTKVDVDVPAKGGFSFDLCRRNEMLMKKGLKPSSFLKTGTTIVGLIFKDGVILGADTRAT 366
           MTK  VD+P KGGFSFDLCRRN+ML KKGLK  ++LKTGTTIVGL+F+DG+ILGADTRAT
Sbjct: 1   MTK-SVDLPPKGGFSFDLCRRNDMLEKKGLKAPTYLKTGTTIVGLVFQDGIILGADTRAT 59

Query: 365 EGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDNISSQLKLHRYHTGRESRVVTALT 186
           EGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTD +SSQL+LHRYHTGRESRVVTALT
Sbjct: 60  EGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALT 119

Query: 185 LLKTHLFSYQGHVSAALVLGGVDVTGPHLHTIYPHGSTDSLPFATMGSGSLAAMAVFESR 6
           LLK HLF+YQGHVSAALVLGGVD+TGPHLHTIYPHGSTD+LPFATMGSGSLAAM+VFES+
Sbjct: 120 LLKRHLFNYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFESK 179

Query: 5   Y 3
           Y
Sbjct: 180 Y 180


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