BLASTX nr result

ID: Bupleurum21_contig00012411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012411
         (912 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK96713.1| unknown [Populus trichocarpa x Populus deltoides]      328   1e-87
ref|XP_004145661.1| PREDICTED: uncharacterized protein HI_1198-l...   321   1e-85
ref|XP_002298628.1| predicted protein [Populus trichocarpa] gi|2...   321   1e-85
ref|XP_002273946.1| PREDICTED: uncharacterized protein HI_1198 [...   317   3e-84
ref|NP_566156.2| putative translation factor [Arabidopsis thalia...   305   1e-80

>gb|ABK96713.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 313

 Score =  328 bits (840), Expect = 1e-87
 Identities = 157/199 (78%), Positives = 178/199 (89%)
 Frame = -2

Query: 599 DPIVQLLSKGAVGVIPTDTVYAIVCDLKSSSAIERLRRIKNIEASKPLSTLCRSFQDIDT 420
           +P+++LL +GAVGVIPTDTVYAIVCDLKS+SAIERLRRIKNIE SKPLS LC S +DIDT
Sbjct: 88  EPVIELLKQGAVGVIPTDTVYAIVCDLKSNSAIERLRRIKNIEPSKPLSILCHSLRDIDT 147

Query: 419 YTTGFPRGGDHGLSNIFRAVKQCLPGPYTFILTASKALPKSCTRYGTTTSKLISRKNVGV 240
           YTTGFPRG   G ++IFRAVK CLPGPYTFILTASK LPK C R+GTTT+K  SRKNVG+
Sbjct: 148 YTTGFPRGDGQGHADIFRAVKHCLPGPYTFILTASKELPKQCVRFGTTTAKYASRKNVGI 207

Query: 239 RIPDDVVCQAILEKMGAPLLSTSVRSPKENEWIIDPVVIADVYGAEGLDFVVDAGVRVAE 60
           R+PDD +CQAILEKM APL+STSVRSPKENEW+IDPVVIAD+YG EGLDFVV+ G+RVA+
Sbjct: 208 RMPDDAICQAILEKMDAPLISTSVRSPKENEWMIDPVVIADIYGLEGLDFVVNGGIRVAD 267

Query: 59  PSTVVDMTASVPRIIRQGK 3
           PSTVVDMT S P+IIRQGK
Sbjct: 268 PSTVVDMTGSSPKIIRQGK 286


>ref|XP_004145661.1| PREDICTED: uncharacterized protein HI_1198-like [Cucumis sativus]
           gi|449502016|ref|XP_004161520.1| PREDICTED:
           uncharacterized protein HI_1198-like [Cucumis sativus]
          Length = 309

 Score =  321 bits (823), Expect = 1e-85
 Identities = 156/199 (78%), Positives = 174/199 (87%)
 Frame = -2

Query: 599 DPIVQLLSKGAVGVIPTDTVYAIVCDLKSSSAIERLRRIKNIEASKPLSTLCRSFQDIDT 420
           DPIV LL +GAVGVIPTDTVY IVCDLK+ SAIER++RIKNIE +KPLS LCRSF+DID 
Sbjct: 88  DPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERMQRIKNIEPTKPLSILCRSFRDIDK 147

Query: 419 YTTGFPRGGDHGLSNIFRAVKQCLPGPYTFILTASKALPKSCTRYGTTTSKLISRKNVGV 240
           YTTGFPRG   G S+IFR VK CLPGPYTFILTASK LPK C RYGTTT+K  SRKNVGV
Sbjct: 148 YTTGFPRGDGQGHSSIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYASRKNVGV 207

Query: 239 RIPDDVVCQAILEKMGAPLLSTSVRSPKENEWIIDPVVIADVYGAEGLDFVVDAGVRVAE 60
           RIPDD +CQAILEKM  PL+STSV+SPKENEW++DPVVIAD+YG EGLDFVVD GVRVA+
Sbjct: 208 RIPDDSICQAILEKMDDPLISTSVKSPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVAD 267

Query: 59  PSTVVDMTASVPRIIRQGK 3
           PSTVVDMT + P+I+RQGK
Sbjct: 268 PSTVVDMTITPPKILRQGK 286


>ref|XP_002298628.1| predicted protein [Populus trichocarpa] gi|222845886|gb|EEE83433.1|
           predicted protein [Populus trichocarpa]
          Length = 322

 Score =  321 bits (823), Expect = 1e-85
 Identities = 158/208 (75%), Positives = 178/208 (85%), Gaps = 9/208 (4%)
 Frame = -2

Query: 599 DPIVQLLSKGAVGVIPTDTVYAIVCDLKSSSAIERLRRIKNIEASK---------PLSTL 447
           +P+++LL +GAVGVIPTDTVYAIVCDLKS+SAIERLRRIKNIE SK         PL  L
Sbjct: 88  EPVIELLKQGAVGVIPTDTVYAIVCDLKSNSAIERLRRIKNIEPSKARNMASLHSPLYIL 147

Query: 446 CRSFQDIDTYTTGFPRGGDHGLSNIFRAVKQCLPGPYTFILTASKALPKSCTRYGTTTSK 267
           C S +DIDTYTTGFPRG   G ++IFRAVK CLPGPYTFILTASK LPK C RYGTTT+K
Sbjct: 148 CHSLRDIDTYTTGFPRGDGQGHADIFRAVKHCLPGPYTFILTASKELPKQCVRYGTTTAK 207

Query: 266 LISRKNVGVRIPDDVVCQAILEKMGAPLLSTSVRSPKENEWIIDPVVIADVYGAEGLDFV 87
             SRKNVG+R+PDD +CQAILEKM APL+STSVRSPKENEW+IDPVVIAD+YGAEGLDFV
Sbjct: 208 YASRKNVGIRMPDDAICQAILEKMDAPLISTSVRSPKENEWMIDPVVIADIYGAEGLDFV 267

Query: 86  VDAGVRVAEPSTVVDMTASVPRIIRQGK 3
           V+ G+RVA+PSTVVDMT S P+IIRQGK
Sbjct: 268 VNGGIRVADPSTVVDMTGSSPKIIRQGK 295


>ref|XP_002273946.1| PREDICTED: uncharacterized protein HI_1198 [Vitis vinifera]
           gi|296082345|emb|CBI21350.3| unnamed protein product
           [Vitis vinifera]
          Length = 306

 Score =  317 bits (811), Expect = 3e-84
 Identities = 153/199 (76%), Positives = 173/199 (86%)
 Frame = -2

Query: 599 DPIVQLLSKGAVGVIPTDTVYAIVCDLKSSSAIERLRRIKNIEASKPLSTLCRSFQDIDT 420
           +P+  LL +GAVGVIPTDTVYAIVC L+S SAIERLRRIK+IEASKPLS LCRS +DIDT
Sbjct: 80  EPVADLLKEGAVGVIPTDTVYAIVCHLRSHSAIERLRRIKDIEASKPLSILCRSLRDIDT 139

Query: 419 YTTGFPRGGDHGLSNIFRAVKQCLPGPYTFILTASKALPKSCTRYGTTTSKLISRKNVGV 240
           YTTGFP G   G +NIFRAVK CLPGPYTFILTASK LPK CTRYGTTT+K  SRKNVGV
Sbjct: 140 YTTGFPCGIGQGQTNIFRAVKHCLPGPYTFILTASKELPKQCTRYGTTTAKYASRKNVGV 199

Query: 239 RIPDDVVCQAILEKMGAPLLSTSVRSPKENEWIIDPVVIADVYGAEGLDFVVDAGVRVAE 60
           R+PDD +C+AIL+ M APL++TSV+SPKENEW++DP+ IADVYG EGLDFVVD GVRVA+
Sbjct: 200 RMPDDAICKAILQMMDAPLIATSVKSPKENEWMLDPITIADVYGPEGLDFVVDGGVRVAD 259

Query: 59  PSTVVDMTASVPRIIRQGK 3
           PSTVVDMT   P+IIRQGK
Sbjct: 260 PSTVVDMTGRTPKIIRQGK 278


>ref|NP_566156.2| putative translation factor [Arabidopsis thaliana]
           gi|6091731|gb|AAF03443.1|AC010797_19 hypothetical
           protein [Arabidopsis thaliana]
           gi|19310491|gb|AAL84979.1| At3g1920/F28J7.25
           [Arabidopsis thaliana] gi|23505865|gb|AAN28792.1|
           At3g1920/F28J7.25 [Arabidopsis thaliana]
           gi|332640214|gb|AEE73735.1| putative translation factor
           [Arabidopsis thaliana]
          Length = 307

 Score =  305 bits (781), Expect = 1e-80
 Identities = 143/198 (72%), Positives = 166/198 (83%)
 Frame = -2

Query: 596 PIVQLLSKGAVGVIPTDTVYAIVCDLKSSSAIERLRRIKNIEASKPLSTLCRSFQDIDTY 417
           P++ LL +GAVGVIPTDTVYAI CD K+ SA+ERLRRIK IE+SKPLS LCRS +DIDT+
Sbjct: 85  PVIDLLKQGAVGVIPTDTVYAIACDCKNHSAVERLRRIKKIESSKPLSILCRSLRDIDTF 144

Query: 416 TTGFPRGGDHGLSNIFRAVKQCLPGPYTFILTASKALPKSCTRYGTTTSKLISRKNVGVR 237
           T GFPRG  HG +N+FRAVKQCLPGPYTFILTASK LPK C  YGTT+ K  SRKNVGVR
Sbjct: 145 TMGFPRGDGHGHANVFRAVKQCLPGPYTFILTASKELPKQCVGYGTTSVKYASRKNVGVR 204

Query: 236 IPDDVVCQAILEKMGAPLLSTSVRSPKENEWIIDPVVIADVYGAEGLDFVVDAGVRVAEP 57
           I DD +CQAIL++M APL+ TSV+ PKENEW+IDP  I D+YG EGLDFVVD G+RVAEP
Sbjct: 205 ISDDALCQAILQQMDAPLICTSVKGPKENEWMIDPTAIGDIYGPEGLDFVVDGGIRVAEP 264

Query: 56  STVVDMTASVPRIIRQGK 3
           ST+VDMT   P++IR+GK
Sbjct: 265 STIVDMTGPYPKVIREGK 282


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