BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012410
         (1009 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17870.3| unnamed protein product [Vitis vinifera]              279   7e-73
ref|XP_002267344.1| PREDICTED: RING-H2 finger protein ATL43-like...   279   7e-73
ref|XP_002511366.1| ring finger protein, putative [Ricinus commu...   252   1e-64
sp|Q5EAE9.2|ATL43_ARATH RecName: Full=RING-H2 finger protein ATL...   247   4e-63
ref|XP_004162811.1| PREDICTED: RING-H2 finger protein ATL43-like...   233   4e-59

>emb|CBI17870.3| unnamed protein product [Vitis vinifera]
          Length = 457

 Score =  279 bits (714), Expect = 7e-73
 Identities = 168/322 (52%), Positives = 204/322 (63%), Gaps = 15/322 (4%)
 Frame = +1

Query: 88   MVKFLCILLCLNLSFFLSQELDDDNIVSTASNP---PLLPPPE--NHDKGPFKPSIHMIV 252
            ++ F C++  L   F +   +  D++V  A+NP   P LPPP     +  PF+PSI +IV
Sbjct: 3    LLGFSCLVFWL--FFCVDGGVGADDVVVVAANPSQSPPLPPPALPRPNFSPFRPSIAVIV 60

Query: 253  GALIFTFSITFLVFLYVKHCKSGSNGYPSNSRGNIDNSYTARKNSGIDPNVIDLLPVFRF 432
            G L   FSITFL+ LY KHCK G NG      G    S  ARKNSGID  VI+ LPVFRF
Sbjct: 61   GVLTTMFSITFLLLLYAKHCKRG-NGVVYT--GTPPLSSAARKNSGIDRTVIESLPVFRF 117

Query: 433  SALRGQKDGLECAVCLTNYEPSEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPE 612
            ++LRGQKDGLECAVCL  +EP+E+LRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPE
Sbjct: 118  ASLRGQKDGLECAVCLNRFEPTEILRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPE 177

Query: 613  DVLLIEHNKTL-----XXXXXXXXXXXXXXXXXAIHRTPGRHSSAGENITKTSKGYLQIT 777
            D+LL+E  K                         + R  GRHSSAGE       G +QI 
Sbjct: 178  DILLVEEPKISVAPPPEPDPPEVEKPDAEPRNPEVRRVSGRHSSAGER----RSGLVQIV 233

Query: 778  VQKPPNASTSTRHSLDSSIISNKDVGS-VSTKCFDKPPRKDELLLAGKESRS-DRRLQHR 951
            + K P+ +TS+R SLDSS  S++     V+  CFD+ PRKDELLL  ++  S +RRL HR
Sbjct: 234  LHK-PDETTSSRRSLDSSSSSSRKRNEPVAVGCFDR-PRKDELLLTSEDRNSFERRLDHR 291

Query: 952  IVVS---SNIEQQRWSDVQPSE 1008
            I+VS   S    QRWSDVQPS+
Sbjct: 292  IIVSAAGSGGFHQRWSDVQPSD 313


>ref|XP_002267344.1| PREDICTED: RING-H2 finger protein ATL43-like [Vitis vinifera]
          Length = 404

 Score =  279 bits (714), Expect = 7e-73
 Identities = 168/322 (52%), Positives = 204/322 (63%), Gaps = 15/322 (4%)
 Frame = +1

Query: 88   MVKFLCILLCLNLSFFLSQELDDDNIVSTASNP---PLLPPPE--NHDKGPFKPSIHMIV 252
            ++ F C++  L   F +   +  D++V  A+NP   P LPPP     +  PF+PSI +IV
Sbjct: 3    LLGFSCLVFWL--FFCVDGGVGADDVVVVAANPSQSPPLPPPALPRPNFSPFRPSIAVIV 60

Query: 253  GALIFTFSITFLVFLYVKHCKSGSNGYPSNSRGNIDNSYTARKNSGIDPNVIDLLPVFRF 432
            G L   FSITFL+ LY KHCK G NG      G    S  ARKNSGID  VI+ LPVFRF
Sbjct: 61   GVLTTMFSITFLLLLYAKHCKRG-NGVVYT--GTPPLSSAARKNSGIDRTVIESLPVFRF 117

Query: 433  SALRGQKDGLECAVCLTNYEPSEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPE 612
            ++LRGQKDGLECAVCL  +EP+E+LRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPE
Sbjct: 118  ASLRGQKDGLECAVCLNRFEPTEILRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPE 177

Query: 613  DVLLIEHNKTL-----XXXXXXXXXXXXXXXXXAIHRTPGRHSSAGENITKTSKGYLQIT 777
            D+LL+E  K                         + R  GRHSSAGE       G +QI 
Sbjct: 178  DILLVEEPKISVAPPPEPDPPEVEKPDAEPRNPEVRRVSGRHSSAGER----RSGLVQIV 233

Query: 778  VQKPPNASTSTRHSLDSSIISNKDVGS-VSTKCFDKPPRKDELLLAGKESRS-DRRLQHR 951
            + K P+ +TS+R SLDSS  S++     V+  CFD+ PRKDELLL  ++  S +RRL HR
Sbjct: 234  LHK-PDETTSSRRSLDSSSSSSRKRNEPVAVGCFDR-PRKDELLLTSEDRNSFERRLDHR 291

Query: 952  IVVS---SNIEQQRWSDVQPSE 1008
            I+VS   S    QRWSDVQPS+
Sbjct: 292  IIVSAAGSGGFHQRWSDVQPSD 313


>ref|XP_002511366.1| ring finger protein, putative [Ricinus communis]
            gi|223550481|gb|EEF51968.1| ring finger protein, putative
            [Ricinus communis]
          Length = 493

 Score =  252 bits (643), Expect = 1e-64
 Identities = 157/325 (48%), Positives = 180/325 (55%), Gaps = 47/325 (14%)
 Frame = +1

Query: 175  ASNPPLLPPPENHDKGPFKPSIHMIVGALIFTFSITFLVFLYVKHCKSGS--NGYPSNSR 348
            A  P LLP   N    PFKPSI +IVG L   FSIT L+ LY KHCK     N + +   
Sbjct: 58   APPPLLLPNYMNSSAPPFKPSIAVIVGVLTTMFSITLLLLLYAKHCKRAHIYNSFNNGGG 117

Query: 349  GNIDNSYTARKNSGIDPNVIDLLPVFRFSALRGQKDGLECAVCLTNYEPSEVLRLLPKCK 528
            G    +  ARKNSGID  VI+ LP+FRFS+LRGQKDGLECAVCLT +EP EVLRLLPKCK
Sbjct: 118  GTGGQTAEARKNSGIDRAVIESLPIFRFSSLRGQKDGLECAVCLTRFEPPEVLRLLPKCK 177

Query: 529  HAFHVECVDTWLDAHSTCPLCRYRVDPEDVLLIEHNK---TLXXXXXXXXXXXXXXXXXA 699
            HAFHVECVDTWLDAHSTCPLCRYRVDPEDVLLI+ +K   T                   
Sbjct: 178  HAFHVECVDTWLDAHSTCPLCRYRVDPEDVLLIDQDKDPATTTNISLPPPQQQSTEIHGG 237

Query: 700  IHRTPGRHSSAGENITKTSKGYLQITVQKPPNASTST---RHSLDS-SIISNKD-----V 852
              R  GRHSSAGE  +  +    QI VQ+P     +T   R SLDS S+  NK+      
Sbjct: 238  GRRISGRHSSAGEKASGFALS--QIVVQRPSATEQTTWFARRSLDSFSMKKNKNNHITRN 295

Query: 853  GSVSTKCFDK---PPRKDELLLAGKESRSD------------------------------ 933
             SV+  CFD+     RKD LLL    S  D                              
Sbjct: 296  ESVAVGCFDRYQSHQRKDGLLLLTNNSNGDGDSDGDDHSLESRRTSTASVNAGAGAGVDK 355

Query: 934  RRLQHRIVVSSNIEQQRWSDVQPSE 1008
             R +HRI+VS N   +RWSDV PS+
Sbjct: 356  TRFEHRIIVSGNASDERWSDVHPSD 380


>sp|Q5EAE9.2|ATL43_ARATH RecName: Full=RING-H2 finger protein ATL43; Flags: Precursor
            gi|9759106|dbj|BAB09675.1| unnamed protein product
            [Arabidopsis thaliana]
          Length = 407

 Score =  247 bits (630), Expect = 4e-63
 Identities = 150/333 (45%), Positives = 188/333 (56%), Gaps = 32/333 (9%)
 Frame = +1

Query: 106  ILLCLNLSFFLSQELDDDN---IVSTASNPPLLPPPENHDKGPFK----PSIHMIVGALI 264
            ILL   LS FL+  L D++   +++T+  PP LPPP    +  F     P I +++  L 
Sbjct: 7    ILLFSTLSLFLNVSLADNHTAVVITTSDTPPPLPPPSPPPRHNFTSSLMPGIAVVIAVLT 66

Query: 265  FTFSITFLVFLYVKHCKSGSNGYPSNSRG------------NIDNSYTARKNSGIDPNVI 408
              FS+TFL+ LYVKHCK  +     N               N       RKNSGID +VI
Sbjct: 67   AFFSLTFLLLLYVKHCKRRNGSVYVNHPQRFAITRYGGGYYNGGGVVGGRKNSGIDRSVI 126

Query: 409  DLLPVFRFSALRGQKDGLECAVCLTNYEPSEVLRLLPKCKHAFHVECVDTWLDAHSTCPL 588
            + LPVFRF AL G KDGLECAVCL  +EP+EVLRLLPKCKHAFHVECVDTWLDAHSTCPL
Sbjct: 127  ESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPL 186

Query: 589  CRYRVDPEDVLLI-------EHNKTLXXXXXXXXXXXXXXXXXAIHRTPGRHSSAGENIT 747
            CRYRVDPED+LLI       E   +                   + R  GRHSSAGE  +
Sbjct: 187  CRYRVDPEDILLIGDCNSWFELQFSKDESNSVNNNPPGLTRFIPVSRISGRHSSAGERAS 246

Query: 748  KTSKGYLQITVQKPPNASTSTRHSLDSSIISNKDVG-----SVSTKCFDKPPRKDELLLA 912
            + ++     + +  P    S R SLDSS+  N D G     SV+  C D+  RKD LLL 
Sbjct: 247  RLNEIRTSSSYKSNP---MSFRRSLDSSLKVN-DAGEEKSESVAVNCLDRLQRKDGLLLI 302

Query: 913  GKESRSDRRLQHRIVVS-SNIEQQRWSDVQPSE 1008
                  + R +HRI++S  N + QRWS+V+PS+
Sbjct: 303  PNRESFEGRFEHRIIISGGNRDDQRWSEVRPSD 335


>ref|XP_004162811.1| PREDICTED: RING-H2 finger protein ATL43-like [Cucumis sativus]
          Length = 391

 Score =  233 bits (595), Expect = 4e-59
 Identities = 150/335 (44%), Positives = 191/335 (57%), Gaps = 40/335 (11%)
 Frame = +1

Query: 124  LSFFLSQELDDDNIVSTASN----PPLL-----PPPENHDKGPFKPSIHMIVGALIFTFS 276
            L+  L+  L +   ++++S+    PPL      PP E     PF+PS+ ++VG L  TFS
Sbjct: 32   LNLILTHPLKETVFLASSSSSPPPPPLFIPSAPPPEEKPVYSPFRPSMAVVVGVLTTTFS 91

Query: 277  ITFLVFLYVKHCKSGSN----GY---PSNSRGNIDNSYTARKNSGIDPNVIDLLPVFRFS 435
            ITFL+ LY KHCK G+     GY   P+   G    S++ RKNSGID  VI+ LP+FRF 
Sbjct: 92   ITFLLLLYAKHCKRGNAAVVVGYSMRPNTMMGV--PSFSTRKNSGIDQTVIESLPIFRFG 149

Query: 436  ALRGQKDGLECAVCLTNYEPSEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPED 615
            +L GQK+GLECAVCL  +EP+EVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPED
Sbjct: 150  SLSGQKEGLECAVCLNRFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPED 209

Query: 616  VLLIE------HNKTLXXXXXXXXXXXXXXXXXAI--------------HRTPGRHSSAG 735
            VLL+E      H++                    +               R  GRHSS G
Sbjct: 210  VLLVEDVNIFLHDQPPPPPQPPPPPPRESNSKDVVLNLEQGRRSGKAGSGRVSGRHSSVG 269

Query: 736  ENITKTSKGYLQITVQKPPNASTSTRHSLDSSIISNKDVGSVSTKCFDKPPRKDELLLAG 915
            E  T  S      + + P       R SLDS     K   +VS  CFD+  RKD LLL  
Sbjct: 270  EKRTGES------SYRDP----ALLRRSLDS-----KRTETVSVGCFDR-HRKDGLLLPE 313

Query: 916  K---ESRSDRRLQHRIVVSSNIE-QQRWSDVQPSE 1008
            +   ++++  RL+HRI+VS  +   +RWSDVQ S+
Sbjct: 314  EKTNQNQNQNRLEHRIIVSPKVPVVERWSDVQGSD 348